Experiment: Urea (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01934 and MPMX26_01935 are separated by 96 nucleotides MPMX26_01935 and MPMX26_01936 overlap by 4 nucleotides MPMX26_01936 and MPMX26_01937 are separated by 11 nucleotides MPMX26_01937 and MPMX26_01938 are separated by 83 nucleotides
MPMX26_01934: MPMX26_01934 - Transcriptional activatory protein BadR, at 1,980,403 to 1,980,885
_01934
MPMX26_01935: MPMX26_01935 - hypothetical protein, at 1,980,982 to 1,981,335
_01935
MPMX26_01936: MPMX26_01936 - hypothetical protein, at 1,981,332 to 1,982,849
_01936
MPMX26_01937: MPMX26_01937 - hypothetical protein, at 1,982,861 to 1,983,133
_01937
MPMX26_01938: MPMX26_01938 - Ferric aerobactin receptor, at 1,983,217 to 1,985,415
_01938
Position (kb)
1981
1982
1983 Strain fitness (log2 ratio)
-1
0
1 at 1980.490 kb on + strand, within MPMX26_01934 at 1980.534 kb on + strand, within MPMX26_01934 at 1980.534 kb on + strand, within MPMX26_01934 at 1980.534 kb on + strand, within MPMX26_01934 at 1980.534 kb on + strand, within MPMX26_01934 at 1980.534 kb on + strand, within MPMX26_01934 at 1980.534 kb on + strand, within MPMX26_01934 at 1980.536 kb on + strand, within MPMX26_01934 at 1980.544 kb on + strand, within MPMX26_01934 at 1980.546 kb on + strand, within MPMX26_01934 at 1980.546 kb on + strand, within MPMX26_01934 at 1980.553 kb on + strand, within MPMX26_01934 at 1980.553 kb on + strand, within MPMX26_01934 at 1980.553 kb on + strand, within MPMX26_01934 at 1980.553 kb on + strand, within MPMX26_01934 at 1980.640 kb on + strand, within MPMX26_01934 at 1980.683 kb on + strand, within MPMX26_01934 at 1980.688 kb on + strand, within MPMX26_01934 at 1980.693 kb on + strand, within MPMX26_01934 at 1980.693 kb on + strand, within MPMX26_01934 at 1980.730 kb on + strand, within MPMX26_01934 at 1980.730 kb on + strand, within MPMX26_01934 at 1980.730 kb on + strand, within MPMX26_01934 at 1980.730 kb on + strand, within MPMX26_01934 at 1980.744 kb on + strand, within MPMX26_01934 at 1981.440 kb on + strand at 1981.499 kb on - strand, within MPMX26_01936 at 1981.512 kb on + strand, within MPMX26_01936
Per-strain Table
Position Strand Gene LocusTag Fraction Urea (N) remove 1,980,490 + MPMX26_01934 0.18 +0.1 1,980,534 + MPMX26_01934 0.27 +0.2 1,980,534 + MPMX26_01934 0.27 +0.6 1,980,534 + MPMX26_01934 0.27 -0.9 1,980,534 + MPMX26_01934 0.27 -0.2 1,980,534 + MPMX26_01934 0.27 +0.0 1,980,534 + MPMX26_01934 0.27 +0.5 1,980,536 + MPMX26_01934 0.28 +0.1 1,980,544 + MPMX26_01934 0.29 +0.1 1,980,546 + MPMX26_01934 0.30 -0.2 1,980,546 + MPMX26_01934 0.30 +0.4 1,980,553 + MPMX26_01934 0.31 +0.3 1,980,553 + MPMX26_01934 0.31 -0.4 1,980,553 + MPMX26_01934 0.31 -0.2 1,980,553 + MPMX26_01934 0.31 -0.4 1,980,640 + MPMX26_01934 0.49 -0.6 1,980,683 + MPMX26_01934 0.58 -0.5 1,980,688 + MPMX26_01934 0.59 -0.1 1,980,693 + MPMX26_01934 0.60 -0.6 1,980,693 + MPMX26_01934 0.60 -0.5 1,980,730 + MPMX26_01934 0.68 -0.3 1,980,730 + MPMX26_01934 0.68 +0.1 1,980,730 + MPMX26_01934 0.68 +0.7 1,980,730 + MPMX26_01934 0.68 -0.1 1,980,744 + MPMX26_01934 0.71 -0.0 1,981,440 + +0.2 1,981,499 - MPMX26_01936 0.11 -0.6 1,981,512 + MPMX26_01936 0.12 -1.4
Or see this region's nucleotide sequence