Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01793

Experiment: Urea (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01792 and MPMX26_01793 are separated by 34 nucleotidesMPMX26_01793 and MPMX26_01794 are separated by 39 nucleotides MPMX26_01792: MPMX26_01792 - hypothetical protein, at 1,850,266 to 1,851,246 _01792 MPMX26_01793: MPMX26_01793 - hypothetical protein, at 1,851,281 to 1,853,290 _01793 MPMX26_01794: MPMX26_01794 - hypothetical protein, at 1,853,330 to 1,856,131 _01794 Position (kb) 1851 1852 1853 1854Strain fitness (log2 ratio) -1 0 1at 1850.311 kb on + strandat 1850.571 kb on + strand, within MPMX26_01792at 1851.154 kb on + strandat 1851.165 kb on + strandat 1852.039 kb on - strand, within MPMX26_01793at 1852.623 kb on - strand, within MPMX26_01793

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Per-strain Table

Position Strand Gene LocusTag Fraction Urea (N)
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1,850,311 + +0.8
1,850,571 + MPMX26_01792 0.31 +1.1
1,851,154 + -0.5
1,851,165 + -0.0
1,852,039 - MPMX26_01793 0.38 -0.0
1,852,623 - MPMX26_01793 0.67 -0.7

Or see this region's nucleotide sequence