Experiment: Urea (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01462 and MPMX26_01463 overlap by 4 nucleotides MPMX26_01463 and MPMX26_01464 are separated by 12 nucleotides MPMX26_01464 and MPMX26_01465 are separated by 186 nucleotides MPMX26_01465 and MPMX26_01466 are separated by 81 nucleotides
MPMX26_01462: MPMX26_01462 - hypothetical protein, at 1,513,112 to 1,514,233
_01462
MPMX26_01463: MPMX26_01463 - hypothetical protein, at 1,514,230 to 1,514,928
_01463
MPMX26_01464: MPMX26_01464 - putative oxidoreductase, at 1,514,941 to 1,515,684
_01464
MPMX26_01465: MPMX26_01465 - hypothetical protein, at 1,515,871 to 1,516,461
_01465
MPMX26_01466: MPMX26_01466 - Bifunctional protein PutA, at 1,516,543 to 1,520,295
_01466
Position (kb) 1514
1515
1516 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 1514.943 kb on + strand at 1515.092 kb on + strand, within MPMX26_01464 at 1515.210 kb on + strand, within MPMX26_01464 at 1515.294 kb on + strand, within MPMX26_01464 at 1515.294 kb on + strand, within MPMX26_01464 at 1515.387 kb on + strand, within MPMX26_01464 at 1515.451 kb on + strand, within MPMX26_01464 at 1516.541 kb on + strand at 1516.676 kb on - strand at 1516.676 kb on - strand at 1516.684 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Urea (N) remove 1,514,943 + +0.3 1,515,092 + MPMX26_01464 0.20 +0.6 1,515,210 + MPMX26_01464 0.36 -2.8 1,515,294 + MPMX26_01464 0.47 -0.7 1,515,294 + MPMX26_01464 0.47 +1.5 1,515,387 + MPMX26_01464 0.60 -1.1 1,515,451 + MPMX26_01464 0.69 -2.0 1,516,541 + -0.2 1,516,676 - +0.4 1,516,676 - +0.7 1,516,684 - -0.2
Or see this region's nucleotide sequence