Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01278

Experiment: Urea (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01276 and MPMX26_01277 are separated by 1 nucleotidesMPMX26_01277 and MPMX26_01278 are separated by 246 nucleotidesMPMX26_01278 and MPMX26_01279 are separated by 105 nucleotidesMPMX26_01279 and MPMX26_01280 overlap by 1 nucleotides MPMX26_01276: MPMX26_01276 - Ktr system potassium uptake protein B, at 1,351,692 to 1,353,038 _01276 MPMX26_01277: MPMX26_01277 - Ktr system potassium uptake protein A, at 1,353,040 to 1,353,690 _01277 MPMX26_01278: MPMX26_01278 - L-threonine dehydratase biosynthetic IlvA, at 1,353,937 to 1,355,475 _01278 MPMX26_01279: MPMX26_01279 - Ribose-5-phosphate isomerase A, at 1,355,581 to 1,356,252 _01279 MPMX26_01280: MPMX26_01280 - hypothetical protein, at 1,356,252 to 1,356,926 _01280 Position (kb) 1353 1354 1355 1356Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1at 1353.223 kb on - strand, within MPMX26_01277at 1353.280 kb on - strand, within MPMX26_01277at 1353.319 kb on - strand, within MPMX26_01277at 1353.333 kb on - strand, within MPMX26_01277at 1353.391 kb on - strand, within MPMX26_01277at 1353.605 kb on - strand, within MPMX26_01277at 1353.750 kb on - strandat 1353.960 kb on - strandat 1354.006 kb on - strandat 1354.060 kb on - strandat 1354.065 kb on - strandat 1354.077 kb on - strandat 1354.077 kb on - strandat 1354.112 kb on - strand, within MPMX26_01278at 1354.116 kb on - strand, within MPMX26_01278at 1354.178 kb on - strand, within MPMX26_01278at 1354.183 kb on - strand, within MPMX26_01278at 1354.183 kb on - strand, within MPMX26_01278at 1354.183 kb on - strand, within MPMX26_01278at 1354.299 kb on - strand, within MPMX26_01278at 1354.299 kb on - strand, within MPMX26_01278at 1354.314 kb on - strand, within MPMX26_01278at 1354.331 kb on - strand, within MPMX26_01278at 1354.339 kb on - strand, within MPMX26_01278at 1354.400 kb on - strand, within MPMX26_01278at 1354.407 kb on - strand, within MPMX26_01278at 1354.441 kb on - strand, within MPMX26_01278at 1354.441 kb on - strand, within MPMX26_01278at 1354.458 kb on - strand, within MPMX26_01278at 1354.465 kb on - strand, within MPMX26_01278at 1354.465 kb on - strand, within MPMX26_01278at 1354.493 kb on - strand, within MPMX26_01278at 1354.493 kb on - strand, within MPMX26_01278at 1354.505 kb on - strand, within MPMX26_01278at 1354.528 kb on - strand, within MPMX26_01278at 1354.530 kb on - strand, within MPMX26_01278at 1354.639 kb on - strand, within MPMX26_01278at 1354.690 kb on - strand, within MPMX26_01278at 1354.705 kb on - strand, within MPMX26_01278at 1354.711 kb on - strand, within MPMX26_01278at 1354.767 kb on - strand, within MPMX26_01278at 1354.789 kb on - strand, within MPMX26_01278at 1354.789 kb on - strand, within MPMX26_01278at 1354.789 kb on - strand, within MPMX26_01278at 1354.789 kb on - strand, within MPMX26_01278at 1354.789 kb on - strand, within MPMX26_01278at 1354.789 kb on - strand, within MPMX26_01278at 1354.798 kb on - strand, within MPMX26_01278at 1354.842 kb on - strand, within MPMX26_01278at 1354.853 kb on - strand, within MPMX26_01278at 1354.915 kb on - strand, within MPMX26_01278at 1354.926 kb on - strand, within MPMX26_01278at 1354.948 kb on - strand, within MPMX26_01278at 1355.013 kb on - strand, within MPMX26_01278at 1355.013 kb on - strand, within MPMX26_01278at 1355.013 kb on - strand, within MPMX26_01278at 1355.026 kb on - strand, within MPMX26_01278at 1355.026 kb on - strand, within MPMX26_01278at 1355.044 kb on - strand, within MPMX26_01278at 1355.124 kb on - strand, within MPMX26_01278at 1355.148 kb on - strand, within MPMX26_01278at 1355.226 kb on - strand, within MPMX26_01278at 1355.238 kb on - strand, within MPMX26_01278at 1355.289 kb on - strand, within MPMX26_01278at 1355.290 kb on - strand, within MPMX26_01278at 1355.313 kb on - strand, within MPMX26_01278at 1355.313 kb on - strand, within MPMX26_01278at 1355.313 kb on - strand, within MPMX26_01278at 1355.313 kb on - strand, within MPMX26_01278at 1355.313 kb on - strand, within MPMX26_01278at 1355.313 kb on - strand, within MPMX26_01278at 1355.313 kb on - strand, within MPMX26_01278at 1355.313 kb on - strand, within MPMX26_01278at 1355.313 kb on - strand, within MPMX26_01278at 1355.315 kb on - strand, within MPMX26_01278at 1355.355 kb on - strandat 1355.410 kb on - strandat 1355.410 kb on - strandat 1355.410 kb on - strandat 1356.237 kb on + strandat 1356.237 kb on + strandat 1356.260 kb on + strandat 1356.328 kb on + strand, within MPMX26_01280at 1356.351 kb on + strand, within MPMX26_01280at 1356.410 kb on + strand, within MPMX26_01280at 1356.421 kb on + strand, within MPMX26_01280at 1356.421 kb on + strand, within MPMX26_01280at 1356.429 kb on + strand, within MPMX26_01280

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Per-strain Table

Position Strand Gene LocusTag Fraction Urea (N)
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1,353,223 - MPMX26_01277 0.28 +0.4
1,353,280 - MPMX26_01277 0.37 +0.0
1,353,319 - MPMX26_01277 0.43 -1.1
1,353,333 - MPMX26_01277 0.45 +0.1
1,353,391 - MPMX26_01277 0.54 +0.8
1,353,605 - MPMX26_01277 0.87 +0.2
1,353,750 - -0.7
1,353,960 - -4.0
1,354,006 - -4.3
1,354,060 - -4.0
1,354,065 - -2.7
1,354,077 - -1.2
1,354,077 - -1.9
1,354,112 - MPMX26_01278 0.11 -1.0
1,354,116 - MPMX26_01278 0.12 -0.2
1,354,178 - MPMX26_01278 0.16 -1.5
1,354,183 - MPMX26_01278 0.16 -3.8
1,354,183 - MPMX26_01278 0.16 -4.1
1,354,183 - MPMX26_01278 0.16 -2.9
1,354,299 - MPMX26_01278 0.24 -4.7
1,354,299 - MPMX26_01278 0.24 -4.0
1,354,314 - MPMX26_01278 0.24 -4.0
1,354,331 - MPMX26_01278 0.26 -1.9
1,354,339 - MPMX26_01278 0.26 -3.7
1,354,400 - MPMX26_01278 0.30 +1.3
1,354,407 - MPMX26_01278 0.31 -4.9
1,354,441 - MPMX26_01278 0.33 -4.5
1,354,441 - MPMX26_01278 0.33 -5.0
1,354,458 - MPMX26_01278 0.34 -2.9
1,354,465 - MPMX26_01278 0.34 -2.2
1,354,465 - MPMX26_01278 0.34 -3.9
1,354,493 - MPMX26_01278 0.36 -0.2
1,354,493 - MPMX26_01278 0.36 -2.8
1,354,505 - MPMX26_01278 0.37 -2.7
1,354,528 - MPMX26_01278 0.38 -4.6
1,354,530 - MPMX26_01278 0.39 -5.8
1,354,639 - MPMX26_01278 0.46 -3.1
1,354,690 - MPMX26_01278 0.49 -4.5
1,354,705 - MPMX26_01278 0.50 -4.4
1,354,711 - MPMX26_01278 0.50 -3.0
1,354,767 - MPMX26_01278 0.54 -3.5
1,354,789 - MPMX26_01278 0.55 -4.4
1,354,789 - MPMX26_01278 0.55 -4.4
1,354,789 - MPMX26_01278 0.55 -3.1
1,354,789 - MPMX26_01278 0.55 -3.7
1,354,789 - MPMX26_01278 0.55 -4.4
1,354,789 - MPMX26_01278 0.55 -3.6
1,354,798 - MPMX26_01278 0.56 -4.6
1,354,842 - MPMX26_01278 0.59 -4.4
1,354,853 - MPMX26_01278 0.60 -4.2
1,354,915 - MPMX26_01278 0.64 -4.2
1,354,926 - MPMX26_01278 0.64 -2.1
1,354,948 - MPMX26_01278 0.66 -0.5
1,355,013 - MPMX26_01278 0.70 -4.0
1,355,013 - MPMX26_01278 0.70 -4.7
1,355,013 - MPMX26_01278 0.70 -5.0
1,355,026 - MPMX26_01278 0.71 -4.6
1,355,026 - MPMX26_01278 0.71 -2.0
1,355,044 - MPMX26_01278 0.72 -2.0
1,355,124 - MPMX26_01278 0.77 -5.1
1,355,148 - MPMX26_01278 0.79 -5.2
1,355,226 - MPMX26_01278 0.84 -4.6
1,355,238 - MPMX26_01278 0.85 -4.4
1,355,289 - MPMX26_01278 0.88 -3.8
1,355,290 - MPMX26_01278 0.88 -5.6
1,355,313 - MPMX26_01278 0.89 -5.2
1,355,313 - MPMX26_01278 0.89 -5.0
1,355,313 - MPMX26_01278 0.89 -3.1
1,355,313 - MPMX26_01278 0.89 -2.9
1,355,313 - MPMX26_01278 0.89 -3.9
1,355,313 - MPMX26_01278 0.89 -4.6
1,355,313 - MPMX26_01278 0.89 -3.1
1,355,313 - MPMX26_01278 0.89 -4.9
1,355,313 - MPMX26_01278 0.89 -3.5
1,355,315 - MPMX26_01278 0.90 -0.5
1,355,355 - -3.7
1,355,410 - -2.8
1,355,410 - -4.8
1,355,410 - -3.9
1,356,237 + -0.0
1,356,237 + +0.0
1,356,260 + +0.2
1,356,328 + MPMX26_01280 0.11 -0.2
1,356,351 + MPMX26_01280 0.15 -0.1
1,356,410 + MPMX26_01280 0.23 -0.4
1,356,421 + MPMX26_01280 0.25 +0.2
1,356,421 + MPMX26_01280 0.25 -0.5
1,356,429 + MPMX26_01280 0.26 +0.0

Or see this region's nucleotide sequence