Experiment: Urea (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01011 and MPMX26_01012 are separated by 191 nucleotides MPMX26_01012 and MPMX26_01013 are separated by 53 nucleotides MPMX26_01013 and MPMX26_01014 are separated by 81 nucleotides
MPMX26_01011: MPMX26_01011 - hypothetical protein, at 1,067,164 to 1,067,988
_01011
MPMX26_01012: MPMX26_01012 - Isocitrate dehydrogenase [NADP], at 1,068,180 to 1,069,436
_01012
MPMX26_01013: MPMX26_01013 - hypothetical protein, at 1,069,490 to 1,070,083
_01013
MPMX26_01014: MPMX26_01014 - putative isomerase YddE, at 1,070,165 to 1,070,992
_01014
Position (kb)
1068
1069
1070 Strain fitness (log2 ratio)
-1
0
1
2 at 1067.224 kb on - strand at 1067.241 kb on - strand at 1067.292 kb on - strand, within MPMX26_01011 at 1067.292 kb on - strand, within MPMX26_01011 at 1067.307 kb on - strand, within MPMX26_01011 at 1067.383 kb on - strand, within MPMX26_01011 at 1067.383 kb on - strand, within MPMX26_01011 at 1067.388 kb on - strand, within MPMX26_01011 at 1067.407 kb on - strand, within MPMX26_01011 at 1067.407 kb on - strand, within MPMX26_01011 at 1067.407 kb on - strand, within MPMX26_01011 at 1067.407 kb on - strand, within MPMX26_01011 at 1067.407 kb on - strand, within MPMX26_01011 at 1067.407 kb on - strand, within MPMX26_01011 at 1067.407 kb on - strand, within MPMX26_01011 at 1067.407 kb on - strand, within MPMX26_01011 at 1067.407 kb on - strand, within MPMX26_01011 at 1067.407 kb on - strand, within MPMX26_01011 at 1067.407 kb on - strand, within MPMX26_01011 at 1067.407 kb on - strand, within MPMX26_01011 at 1067.407 kb on - strand, within MPMX26_01011 at 1067.407 kb on - strand, within MPMX26_01011 at 1067.431 kb on - strand, within MPMX26_01011 at 1067.443 kb on - strand, within MPMX26_01011 at 1067.443 kb on - strand, within MPMX26_01011 at 1067.448 kb on - strand, within MPMX26_01011 at 1067.501 kb on - strand, within MPMX26_01011 at 1067.502 kb on - strand, within MPMX26_01011 at 1067.547 kb on - strand, within MPMX26_01011 at 1067.560 kb on - strand, within MPMX26_01011 at 1067.560 kb on - strand, within MPMX26_01011 at 1067.560 kb on - strand, within MPMX26_01011 at 1067.560 kb on - strand, within MPMX26_01011 at 1067.657 kb on - strand, within MPMX26_01011 at 1067.657 kb on - strand, within MPMX26_01011 at 1067.680 kb on - strand, within MPMX26_01011 at 1067.704 kb on - strand, within MPMX26_01011 at 1067.704 kb on - strand, within MPMX26_01011 at 1067.733 kb on - strand, within MPMX26_01011 at 1067.733 kb on - strand, within MPMX26_01011 at 1067.853 kb on - strand, within MPMX26_01011 at 1067.853 kb on - strand, within MPMX26_01011 at 1067.853 kb on - strand, within MPMX26_01011 at 1067.868 kb on - strand, within MPMX26_01011 at 1067.926 kb on - strand at 1067.926 kb on - strand at 1067.965 kb on - strand at 1067.965 kb on - strand at 1067.965 kb on - strand at 1067.965 kb on - strand at 1067.965 kb on - strand at 1067.965 kb on - strand at 1067.965 kb on - strand at 1067.965 kb on - strand at 1067.965 kb on - strand at 1067.965 kb on - strand at 1067.965 kb on - strand at 1068.231 kb on + strand at 1068.240 kb on - strand at 1068.252 kb on + strand at 1068.297 kb on + strand at 1068.297 kb on + strand at 1068.317 kb on + strand, within MPMX26_01012 at 1068.327 kb on + strand, within MPMX26_01012 at 1068.474 kb on + strand, within MPMX26_01012 at 1068.482 kb on + strand, within MPMX26_01012 at 1068.482 kb on + strand, within MPMX26_01012 at 1068.483 kb on + strand, within MPMX26_01012 at 1068.540 kb on + strand, within MPMX26_01012 at 1068.549 kb on + strand, within MPMX26_01012 at 1068.549 kb on + strand, within MPMX26_01012 at 1068.549 kb on + strand, within MPMX26_01012 at 1068.559 kb on + strand, within MPMX26_01012 at 1068.559 kb on + strand, within MPMX26_01012 at 1068.570 kb on + strand, within MPMX26_01012 at 1068.578 kb on + strand, within MPMX26_01012 at 1068.585 kb on + strand, within MPMX26_01012 at 1068.590 kb on + strand, within MPMX26_01012 at 1068.590 kb on + strand, within MPMX26_01012 at 1068.590 kb on + strand, within MPMX26_01012 at 1068.590 kb on + strand, within MPMX26_01012 at 1068.590 kb on + strand, within MPMX26_01012 at 1068.590 kb on + strand, within MPMX26_01012 at 1068.590 kb on + strand, within MPMX26_01012 at 1068.590 kb on + strand, within MPMX26_01012 at 1068.590 kb on + strand, within MPMX26_01012 at 1068.590 kb on + strand, within MPMX26_01012 at 1068.590 kb on + strand, within MPMX26_01012 at 1068.621 kb on + strand, within MPMX26_01012 at 1068.621 kb on + strand, within MPMX26_01012 at 1068.792 kb on + strand, within MPMX26_01012 at 1068.809 kb on + strand, within MPMX26_01012 at 1068.809 kb on + strand, within MPMX26_01012 at 1068.809 kb on + strand, within MPMX26_01012 at 1068.863 kb on + strand, within MPMX26_01012 at 1068.869 kb on + strand, within MPMX26_01012 at 1068.869 kb on + strand, within MPMX26_01012 at 1068.887 kb on + strand, within MPMX26_01012 at 1068.950 kb on + strand, within MPMX26_01012 at 1068.953 kb on + strand, within MPMX26_01012 at 1068.993 kb on + strand, within MPMX26_01012 at 1069.043 kb on + strand, within MPMX26_01012 at 1069.151 kb on + strand, within MPMX26_01012 at 1069.186 kb on + strand, within MPMX26_01012 at 1069.191 kb on + strand, within MPMX26_01012 at 1069.203 kb on + strand, within MPMX26_01012 at 1069.218 kb on + strand, within MPMX26_01012 at 1069.223 kb on + strand, within MPMX26_01012 at 1069.223 kb on + strand, within MPMX26_01012 at 1069.223 kb on + strand, within MPMX26_01012 at 1069.223 kb on + strand, within MPMX26_01012 at 1069.223 kb on + strand, within MPMX26_01012 at 1069.223 kb on + strand, within MPMX26_01012 at 1069.223 kb on + strand, within MPMX26_01012 at 1069.223 kb on + strand, within MPMX26_01012 at 1069.223 kb on + strand, within MPMX26_01012 at 1069.223 kb on + strand, within MPMX26_01012 at 1069.223 kb on + strand, within MPMX26_01012 at 1069.239 kb on + strand, within MPMX26_01012 at 1069.257 kb on + strand, within MPMX26_01012 at 1069.275 kb on + strand, within MPMX26_01012 at 1069.285 kb on + strand, within MPMX26_01012 at 1069.285 kb on + strand, within MPMX26_01012 at 1069.285 kb on + strand, within MPMX26_01012 at 1069.285 kb on + strand, within MPMX26_01012 at 1069.334 kb on + strand at 1069.334 kb on + strand at 1069.383 kb on + strand at 1069.383 kb on + strand at 1069.383 kb on + strand at 1069.383 kb on + strand at 1069.383 kb on + strand at 1069.393 kb on + strand at 1069.393 kb on + strand at 1069.393 kb on + strand at 1069.393 kb on + strand at 1069.393 kb on + strand at 1069.393 kb on + strand at 1069.393 kb on + strand at 1069.732 kb on - strand, within MPMX26_01013 at 1069.732 kb on - strand, within MPMX26_01013 at 1069.732 kb on - strand, within MPMX26_01013 at 1069.954 kb on - strand, within MPMX26_01013 at 1069.981 kb on - strand, within MPMX26_01013 at 1070.384 kb on + strand, within MPMX26_01014
Per-strain Table
Position Strand Gene LocusTag Fraction Urea (N) remove 1,067,224 - +0.3 1,067,241 - -0.3 1,067,292 - MPMX26_01011 0.16 +0.2 1,067,292 - MPMX26_01011 0.16 +0.3 1,067,307 - MPMX26_01011 0.17 -1.1 1,067,383 - MPMX26_01011 0.27 +0.0 1,067,383 - MPMX26_01011 0.27 +0.3 1,067,388 - MPMX26_01011 0.27 +0.2 1,067,407 - MPMX26_01011 0.29 +0.4 1,067,407 - MPMX26_01011 0.29 +0.4 1,067,407 - MPMX26_01011 0.29 +0.3 1,067,407 - MPMX26_01011 0.29 +0.1 1,067,407 - MPMX26_01011 0.29 +0.3 1,067,407 - MPMX26_01011 0.29 -1.1 1,067,407 - MPMX26_01011 0.29 -0.9 1,067,407 - MPMX26_01011 0.29 -0.4 1,067,407 - MPMX26_01011 0.29 +0.4 1,067,407 - MPMX26_01011 0.29 +0.1 1,067,407 - MPMX26_01011 0.29 -0.3 1,067,407 - MPMX26_01011 0.29 -0.1 1,067,407 - MPMX26_01011 0.29 -0.2 1,067,407 - MPMX26_01011 0.29 +0.3 1,067,431 - MPMX26_01011 0.32 -0.0 1,067,443 - MPMX26_01011 0.34 +0.5 1,067,443 - MPMX26_01011 0.34 -0.0 1,067,448 - MPMX26_01011 0.34 -1.0 1,067,501 - MPMX26_01011 0.41 +1.1 1,067,502 - MPMX26_01011 0.41 +0.4 1,067,547 - MPMX26_01011 0.46 -0.5 1,067,560 - MPMX26_01011 0.48 +0.4 1,067,560 - MPMX26_01011 0.48 -0.1 1,067,560 - MPMX26_01011 0.48 -0.3 1,067,560 - MPMX26_01011 0.48 -0.1 1,067,657 - MPMX26_01011 0.60 -1.2 1,067,657 - MPMX26_01011 0.60 +0.2 1,067,680 - MPMX26_01011 0.63 +0.2 1,067,704 - MPMX26_01011 0.65 +0.6 1,067,704 - MPMX26_01011 0.65 +0.3 1,067,733 - MPMX26_01011 0.69 +0.2 1,067,733 - MPMX26_01011 0.69 -0.7 1,067,853 - MPMX26_01011 0.84 -0.4 1,067,853 - MPMX26_01011 0.84 +0.2 1,067,853 - MPMX26_01011 0.84 +0.2 1,067,868 - MPMX26_01011 0.85 -0.1 1,067,926 - -0.3 1,067,926 - +2.1 1,067,965 - -0.5 1,067,965 - -0.8 1,067,965 - +0.6 1,067,965 - -0.9 1,067,965 - +0.1 1,067,965 - +0.3 1,067,965 - +0.0 1,067,965 - -0.0 1,067,965 - -0.3 1,067,965 - +0.0 1,067,965 - -0.1 1,068,231 + +0.7 1,068,240 - +0.4 1,068,252 + +0.5 1,068,297 + +0.9 1,068,297 + +0.2 1,068,317 + MPMX26_01012 0.11 +0.5 1,068,327 + MPMX26_01012 0.12 +0.1 1,068,474 + MPMX26_01012 0.23 +0.4 1,068,482 + MPMX26_01012 0.24 +0.4 1,068,482 + MPMX26_01012 0.24 +0.2 1,068,483 + MPMX26_01012 0.24 -0.2 1,068,540 + MPMX26_01012 0.29 +0.3 1,068,549 + MPMX26_01012 0.29 -0.5 1,068,549 + MPMX26_01012 0.29 +0.4 1,068,549 + MPMX26_01012 0.29 -0.0 1,068,559 + MPMX26_01012 0.30 +0.3 1,068,559 + MPMX26_01012 0.30 +0.2 1,068,570 + MPMX26_01012 0.31 -0.1 1,068,578 + MPMX26_01012 0.32 +0.5 1,068,585 + MPMX26_01012 0.32 +0.7 1,068,590 + MPMX26_01012 0.33 +0.4 1,068,590 + MPMX26_01012 0.33 -0.0 1,068,590 + MPMX26_01012 0.33 +0.7 1,068,590 + MPMX26_01012 0.33 +0.2 1,068,590 + MPMX26_01012 0.33 +0.0 1,068,590 + MPMX26_01012 0.33 +0.3 1,068,590 + MPMX26_01012 0.33 +0.0 1,068,590 + MPMX26_01012 0.33 +0.2 1,068,590 + MPMX26_01012 0.33 +0.0 1,068,590 + MPMX26_01012 0.33 +0.6 1,068,590 + MPMX26_01012 0.33 +0.7 1,068,621 + MPMX26_01012 0.35 +0.0 1,068,621 + MPMX26_01012 0.35 +0.8 1,068,792 + MPMX26_01012 0.49 +0.1 1,068,809 + MPMX26_01012 0.50 -0.2 1,068,809 + MPMX26_01012 0.50 +0.9 1,068,809 + MPMX26_01012 0.50 +0.6 1,068,863 + MPMX26_01012 0.54 +0.4 1,068,869 + MPMX26_01012 0.55 -0.0 1,068,869 + MPMX26_01012 0.55 +0.3 1,068,887 + MPMX26_01012 0.56 +0.1 1,068,950 + MPMX26_01012 0.61 +0.3 1,068,953 + MPMX26_01012 0.61 +0.3 1,068,993 + MPMX26_01012 0.65 +0.1 1,069,043 + MPMX26_01012 0.69 +0.4 1,069,151 + MPMX26_01012 0.77 +0.2 1,069,186 + MPMX26_01012 0.80 +0.7 1,069,191 + MPMX26_01012 0.80 +0.1 1,069,203 + MPMX26_01012 0.81 -0.1 1,069,218 + MPMX26_01012 0.83 -0.5 1,069,223 + MPMX26_01012 0.83 +0.4 1,069,223 + MPMX26_01012 0.83 +0.4 1,069,223 + MPMX26_01012 0.83 +0.5 1,069,223 + MPMX26_01012 0.83 +0.3 1,069,223 + MPMX26_01012 0.83 +0.2 1,069,223 + MPMX26_01012 0.83 +0.2 1,069,223 + MPMX26_01012 0.83 +1.0 1,069,223 + MPMX26_01012 0.83 -0.3 1,069,223 + MPMX26_01012 0.83 -0.3 1,069,223 + MPMX26_01012 0.83 +0.2 1,069,223 + MPMX26_01012 0.83 -0.3 1,069,239 + MPMX26_01012 0.84 +0.4 1,069,257 + MPMX26_01012 0.86 +0.4 1,069,275 + MPMX26_01012 0.87 +0.1 1,069,285 + MPMX26_01012 0.88 +0.3 1,069,285 + MPMX26_01012 0.88 +0.8 1,069,285 + MPMX26_01012 0.88 -0.1 1,069,285 + MPMX26_01012 0.88 -0.4 1,069,334 + +0.7 1,069,334 + -0.0 1,069,383 + +0.1 1,069,383 + +0.1 1,069,383 + -0.1 1,069,383 + +0.6 1,069,383 + +0.6 1,069,393 + +0.7 1,069,393 + +0.5 1,069,393 + -0.4 1,069,393 + +1.2 1,069,393 + +0.2 1,069,393 + +0.1 1,069,393 + +0.9 1,069,732 - MPMX26_01013 0.41 +0.7 1,069,732 - MPMX26_01013 0.41 +2.3 1,069,732 - MPMX26_01013 0.41 +0.8 1,069,954 - MPMX26_01013 0.78 +0.5 1,069,981 - MPMX26_01013 0.83 -0.1 1,070,384 + MPMX26_01014 0.26 -0.0
Or see this region's nucleotide sequence