Experiment: Urea (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01001 and MPMX26_01002 are separated by 40 nucleotides MPMX26_01002 and MPMX26_01003 are separated by 81 nucleotides MPMX26_01003 and MPMX26_01004 are separated by 481 nucleotides
MPMX26_01001: MPMX26_01001 - Ribosomal RNA small subunit methyltransferase E, at 1,052,510 to 1,053,229
_01001
MPMX26_01002: MPMX26_01002 - 5,10-methylenetetrahydrofolate reductase, at 1,053,270 to 1,054,106
_01002
MPMX26_01003: MPMX26_01003 - Adenosylhomocysteinase, at 1,054,188 to 1,055,570
_01003
MPMX26_01004: MPMX26_01004 - Deoxyribodipyrimidine photo-lyase, at 1,056,052 to 1,057,491
_01004
Position (kb)
1054
1055
1056 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1053.192 kb on - strand at 1053.242 kb on - strand at 1053.281 kb on - strand at 1053.281 kb on - strand at 1053.281 kb on - strand at 1053.281 kb on - strand at 1053.281 kb on - strand at 1053.282 kb on - strand at 1053.288 kb on - strand at 1053.315 kb on - strand at 1053.315 kb on - strand at 1053.321 kb on - strand at 1053.365 kb on - strand, within MPMX26_01002 at 1053.382 kb on - strand, within MPMX26_01002 at 1053.394 kb on - strand, within MPMX26_01002 at 1053.415 kb on - strand, within MPMX26_01002 at 1053.431 kb on - strand, within MPMX26_01002 at 1053.431 kb on - strand, within MPMX26_01002 at 1053.477 kb on - strand, within MPMX26_01002 at 1053.523 kb on - strand, within MPMX26_01002 at 1053.523 kb on - strand, within MPMX26_01002 at 1053.523 kb on - strand, within MPMX26_01002 at 1053.613 kb on - strand, within MPMX26_01002 at 1053.620 kb on - strand, within MPMX26_01002 at 1053.625 kb on - strand, within MPMX26_01002 at 1053.636 kb on - strand, within MPMX26_01002 at 1053.636 kb on - strand, within MPMX26_01002 at 1053.636 kb on - strand, within MPMX26_01002 at 1053.636 kb on - strand, within MPMX26_01002 at 1053.690 kb on - strand, within MPMX26_01002 at 1053.728 kb on - strand, within MPMX26_01002 at 1053.728 kb on - strand, within MPMX26_01002 at 1053.735 kb on - strand, within MPMX26_01002 at 1053.789 kb on - strand, within MPMX26_01002 at 1053.794 kb on - strand, within MPMX26_01002 at 1053.823 kb on - strand, within MPMX26_01002 at 1053.823 kb on - strand, within MPMX26_01002 at 1053.823 kb on - strand, within MPMX26_01002 at 1053.823 kb on - strand, within MPMX26_01002 at 1053.849 kb on - strand, within MPMX26_01002 at 1053.849 kb on - strand, within MPMX26_01002 at 1053.871 kb on - strand, within MPMX26_01002 at 1053.871 kb on - strand, within MPMX26_01002 at 1053.871 kb on - strand, within MPMX26_01002 at 1053.871 kb on - strand, within MPMX26_01002 at 1053.872 kb on - strand, within MPMX26_01002 at 1053.872 kb on - strand, within MPMX26_01002 at 1053.876 kb on - strand, within MPMX26_01002 at 1053.892 kb on - strand, within MPMX26_01002 at 1053.897 kb on - strand, within MPMX26_01002 at 1053.905 kb on - strand, within MPMX26_01002 at 1053.907 kb on - strand, within MPMX26_01002 at 1053.907 kb on - strand, within MPMX26_01002 at 1053.907 kb on - strand, within MPMX26_01002 at 1053.913 kb on - strand, within MPMX26_01002 at 1053.921 kb on - strand, within MPMX26_01002 at 1053.921 kb on - strand, within MPMX26_01002 at 1053.921 kb on - strand, within MPMX26_01002 at 1053.921 kb on - strand, within MPMX26_01002 at 1053.921 kb on - strand, within MPMX26_01002 at 1053.926 kb on - strand, within MPMX26_01002 at 1053.943 kb on - strand, within MPMX26_01002 at 1053.971 kb on - strand, within MPMX26_01002 at 1053.987 kb on - strand, within MPMX26_01002 at 1053.987 kb on - strand, within MPMX26_01002 at 1054.104 kb on - strand at 1054.177 kb on - strand at 1054.182 kb on - strand at 1054.184 kb on - strand at 1054.209 kb on - strand at 1054.210 kb on - strand at 1054.210 kb on - strand at 1054.215 kb on - strand at 1054.246 kb on - strand at 1054.258 kb on - strand at 1054.258 kb on - strand at 1054.258 kb on - strand at 1054.263 kb on - strand at 1054.263 kb on - strand at 1054.263 kb on - strand at 1054.265 kb on - strand at 1054.265 kb on - strand at 1054.274 kb on - strand at 1054.279 kb on - strand at 1054.293 kb on - strand at 1054.293 kb on - strand at 1054.342 kb on - strand, within MPMX26_01003 at 1054.342 kb on - strand, within MPMX26_01003 at 1054.470 kb on - strand, within MPMX26_01003 at 1054.470 kb on - strand, within MPMX26_01003 at 1054.470 kb on - strand, within MPMX26_01003 at 1054.470 kb on - strand, within MPMX26_01003 at 1054.470 kb on - strand, within MPMX26_01003 at 1054.535 kb on - strand, within MPMX26_01003 at 1054.572 kb on - strand, within MPMX26_01003 at 1054.586 kb on - strand, within MPMX26_01003 at 1054.588 kb on - strand, within MPMX26_01003 at 1054.588 kb on - strand, within MPMX26_01003 at 1054.588 kb on - strand, within MPMX26_01003 at 1054.588 kb on - strand, within MPMX26_01003 at 1054.588 kb on - strand, within MPMX26_01003 at 1054.588 kb on - strand, within MPMX26_01003 at 1054.596 kb on - strand, within MPMX26_01003 at 1054.608 kb on - strand, within MPMX26_01003 at 1054.633 kb on - strand, within MPMX26_01003 at 1054.655 kb on - strand, within MPMX26_01003 at 1054.690 kb on - strand, within MPMX26_01003 at 1054.754 kb on - strand, within MPMX26_01003 at 1054.754 kb on - strand, within MPMX26_01003 at 1054.754 kb on - strand, within MPMX26_01003 at 1054.754 kb on - strand, within MPMX26_01003 at 1054.795 kb on - strand, within MPMX26_01003 at 1054.795 kb on - strand, within MPMX26_01003 at 1054.800 kb on - strand, within MPMX26_01003 at 1054.805 kb on - strand, within MPMX26_01003 at 1054.805 kb on - strand, within MPMX26_01003 at 1054.805 kb on - strand, within MPMX26_01003 at 1054.805 kb on - strand, within MPMX26_01003 at 1054.805 kb on - strand, within MPMX26_01003 at 1054.805 kb on - strand, within MPMX26_01003 at 1054.810 kb on - strand, within MPMX26_01003 at 1054.810 kb on - strand, within MPMX26_01003 at 1054.810 kb on - strand, within MPMX26_01003 at 1054.810 kb on - strand, within MPMX26_01003 at 1054.810 kb on - strand, within MPMX26_01003 at 1054.810 kb on - strand, within MPMX26_01003 at 1054.810 kb on - strand, within MPMX26_01003 at 1054.810 kb on - strand, within MPMX26_01003 at 1054.810 kb on - strand, within MPMX26_01003 at 1054.815 kb on - strand, within MPMX26_01003 at 1054.820 kb on - strand, within MPMX26_01003 at 1054.840 kb on - strand, within MPMX26_01003 at 1054.846 kb on - strand, within MPMX26_01003 at 1054.855 kb on - strand, within MPMX26_01003 at 1054.855 kb on - strand, within MPMX26_01003 at 1054.873 kb on - strand, within MPMX26_01003 at 1054.881 kb on - strand, within MPMX26_01003 at 1054.881 kb on - strand, within MPMX26_01003 at 1054.909 kb on - strand, within MPMX26_01003 at 1054.912 kb on - strand, within MPMX26_01003 at 1054.923 kb on - strand, within MPMX26_01003 at 1054.966 kb on - strand, within MPMX26_01003 at 1054.969 kb on - strand, within MPMX26_01003 at 1054.977 kb on - strand, within MPMX26_01003 at 1054.980 kb on - strand, within MPMX26_01003 at 1055.015 kb on - strand, within MPMX26_01003 at 1055.052 kb on - strand, within MPMX26_01003 at 1055.066 kb on - strand, within MPMX26_01003 at 1055.074 kb on - strand, within MPMX26_01003 at 1055.074 kb on - strand, within MPMX26_01003 at 1055.075 kb on - strand, within MPMX26_01003 at 1055.085 kb on - strand, within MPMX26_01003 at 1055.125 kb on - strand, within MPMX26_01003 at 1055.151 kb on - strand, within MPMX26_01003 at 1055.221 kb on - strand, within MPMX26_01003 at 1055.221 kb on - strand, within MPMX26_01003 at 1055.221 kb on - strand, within MPMX26_01003 at 1055.221 kb on - strand, within MPMX26_01003 at 1055.221 kb on - strand, within MPMX26_01003 at 1055.221 kb on - strand, within MPMX26_01003 at 1055.234 kb on - strand, within MPMX26_01003 at 1055.240 kb on - strand, within MPMX26_01003 at 1055.309 kb on - strand, within MPMX26_01003 at 1055.309 kb on - strand, within MPMX26_01003 at 1055.309 kb on - strand, within MPMX26_01003 at 1055.309 kb on - strand, within MPMX26_01003 at 1055.309 kb on - strand, within MPMX26_01003 at 1055.324 kb on - strand, within MPMX26_01003 at 1055.327 kb on - strand, within MPMX26_01003 at 1055.347 kb on - strand, within MPMX26_01003 at 1055.375 kb on - strand, within MPMX26_01003 at 1055.448 kb on - strand at 1055.454 kb on - strand at 1055.468 kb on - strand at 1055.468 kb on - strand at 1055.468 kb on - strand at 1055.468 kb on - strand at 1055.513 kb on - strand at 1055.513 kb on - strand at 1055.576 kb on - strand at 1055.576 kb on - strand at 1055.576 kb on - strand at 1055.576 kb on - strand at 1055.576 kb on - strand at 1055.604 kb on - strand at 1055.604 kb on - strand at 1055.639 kb on - strand at 1055.639 kb on - strand at 1055.647 kb on - strand at 1055.658 kb on - strand at 1055.693 kb on - strand at 1055.698 kb on - strand at 1055.706 kb on - strand at 1055.707 kb on - strand at 1055.707 kb on - strand at 1055.722 kb on - strand at 1055.722 kb on - strand at 1055.722 kb on - strand at 1055.722 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Urea (N) remove 1,053,192 - +0.5 1,053,242 - -0.9 1,053,281 - -0.5 1,053,281 - -0.0 1,053,281 - -0.1 1,053,281 - -1.0 1,053,281 - -0.2 1,053,282 - -0.6 1,053,288 - +0.1 1,053,315 - -0.1 1,053,315 - -0.2 1,053,321 - +0.1 1,053,365 - MPMX26_01002 0.11 -0.1 1,053,382 - MPMX26_01002 0.13 -0.4 1,053,394 - MPMX26_01002 0.15 -0.5 1,053,415 - MPMX26_01002 0.17 -0.2 1,053,431 - MPMX26_01002 0.19 +0.3 1,053,431 - MPMX26_01002 0.19 -0.2 1,053,477 - MPMX26_01002 0.25 -0.1 1,053,523 - MPMX26_01002 0.30 +0.5 1,053,523 - MPMX26_01002 0.30 -0.1 1,053,523 - MPMX26_01002 0.30 -0.2 1,053,613 - MPMX26_01002 0.41 +0.0 1,053,620 - MPMX26_01002 0.42 -0.2 1,053,625 - MPMX26_01002 0.42 -0.6 1,053,636 - MPMX26_01002 0.44 -0.7 1,053,636 - MPMX26_01002 0.44 -0.5 1,053,636 - MPMX26_01002 0.44 +0.4 1,053,636 - MPMX26_01002 0.44 +0.0 1,053,690 - MPMX26_01002 0.50 -0.5 1,053,728 - MPMX26_01002 0.55 +0.1 1,053,728 - MPMX26_01002 0.55 +0.0 1,053,735 - MPMX26_01002 0.56 -0.4 1,053,789 - MPMX26_01002 0.62 +0.2 1,053,794 - MPMX26_01002 0.63 +0.3 1,053,823 - MPMX26_01002 0.66 +0.0 1,053,823 - MPMX26_01002 0.66 +0.0 1,053,823 - MPMX26_01002 0.66 +0.1 1,053,823 - MPMX26_01002 0.66 -0.8 1,053,849 - MPMX26_01002 0.69 +0.2 1,053,849 - MPMX26_01002 0.69 +0.0 1,053,871 - MPMX26_01002 0.72 -0.1 1,053,871 - MPMX26_01002 0.72 +0.3 1,053,871 - MPMX26_01002 0.72 -1.4 1,053,871 - MPMX26_01002 0.72 +0.1 1,053,872 - MPMX26_01002 0.72 -0.1 1,053,872 - MPMX26_01002 0.72 +0.3 1,053,876 - MPMX26_01002 0.72 -0.0 1,053,892 - MPMX26_01002 0.74 -0.3 1,053,897 - MPMX26_01002 0.75 -0.2 1,053,905 - MPMX26_01002 0.76 -0.4 1,053,907 - MPMX26_01002 0.76 +0.2 1,053,907 - MPMX26_01002 0.76 -0.7 1,053,907 - MPMX26_01002 0.76 +0.4 1,053,913 - MPMX26_01002 0.77 -0.3 1,053,921 - MPMX26_01002 0.78 +0.3 1,053,921 - MPMX26_01002 0.78 -0.5 1,053,921 - MPMX26_01002 0.78 -0.3 1,053,921 - MPMX26_01002 0.78 -0.3 1,053,921 - MPMX26_01002 0.78 +0.6 1,053,926 - MPMX26_01002 0.78 -0.1 1,053,943 - MPMX26_01002 0.80 -0.0 1,053,971 - MPMX26_01002 0.84 -0.4 1,053,987 - MPMX26_01002 0.86 -0.2 1,053,987 - MPMX26_01002 0.86 +0.2 1,054,104 - -0.5 1,054,177 - +0.4 1,054,182 - +0.1 1,054,184 - +0.2 1,054,209 - -1.9 1,054,210 - -0.4 1,054,210 - -0.5 1,054,215 - -1.7 1,054,246 - -0.4 1,054,258 - -1.4 1,054,258 - -1.5 1,054,258 - -0.2 1,054,263 - +0.3 1,054,263 - -0.7 1,054,263 - -0.5 1,054,265 - -1.2 1,054,265 - -1.3 1,054,274 - -0.9 1,054,279 - -1.0 1,054,293 - -1.8 1,054,293 - -0.2 1,054,342 - MPMX26_01003 0.11 -1.7 1,054,342 - MPMX26_01003 0.11 -1.8 1,054,470 - MPMX26_01003 0.20 -1.2 1,054,470 - MPMX26_01003 0.20 -1.9 1,054,470 - MPMX26_01003 0.20 -0.5 1,054,470 - MPMX26_01003 0.20 -1.3 1,054,470 - MPMX26_01003 0.20 -1.6 1,054,535 - MPMX26_01003 0.25 -1.2 1,054,572 - MPMX26_01003 0.28 -1.1 1,054,586 - MPMX26_01003 0.29 -2.3 1,054,588 - MPMX26_01003 0.29 -1.3 1,054,588 - MPMX26_01003 0.29 -1.9 1,054,588 - MPMX26_01003 0.29 -0.7 1,054,588 - MPMX26_01003 0.29 -1.0 1,054,588 - MPMX26_01003 0.29 -1.5 1,054,588 - MPMX26_01003 0.29 -0.9 1,054,596 - MPMX26_01003 0.30 -0.9 1,054,608 - MPMX26_01003 0.30 -2.5 1,054,633 - MPMX26_01003 0.32 -0.8 1,054,655 - MPMX26_01003 0.34 -0.0 1,054,690 - MPMX26_01003 0.36 -0.4 1,054,754 - MPMX26_01003 0.41 -0.8 1,054,754 - MPMX26_01003 0.41 -1.8 1,054,754 - MPMX26_01003 0.41 -1.9 1,054,754 - MPMX26_01003 0.41 -1.4 1,054,795 - MPMX26_01003 0.44 -0.6 1,054,795 - MPMX26_01003 0.44 -1.4 1,054,800 - MPMX26_01003 0.44 -2.3 1,054,805 - MPMX26_01003 0.45 -0.9 1,054,805 - MPMX26_01003 0.45 -2.4 1,054,805 - MPMX26_01003 0.45 -1.3 1,054,805 - MPMX26_01003 0.45 -1.8 1,054,805 - MPMX26_01003 0.45 -1.3 1,054,805 - MPMX26_01003 0.45 -1.1 1,054,810 - MPMX26_01003 0.45 -0.8 1,054,810 - MPMX26_01003 0.45 -0.6 1,054,810 - MPMX26_01003 0.45 -1.2 1,054,810 - MPMX26_01003 0.45 -2.0 1,054,810 - MPMX26_01003 0.45 -1.3 1,054,810 - MPMX26_01003 0.45 -1.3 1,054,810 - MPMX26_01003 0.45 -1.5 1,054,810 - MPMX26_01003 0.45 -1.6 1,054,810 - MPMX26_01003 0.45 -1.0 1,054,815 - MPMX26_01003 0.45 -1.1 1,054,820 - MPMX26_01003 0.46 -1.5 1,054,840 - MPMX26_01003 0.47 -1.7 1,054,846 - MPMX26_01003 0.48 -0.2 1,054,855 - MPMX26_01003 0.48 -1.1 1,054,855 - MPMX26_01003 0.48 -1.5 1,054,873 - MPMX26_01003 0.50 +0.3 1,054,881 - MPMX26_01003 0.50 -1.8 1,054,881 - MPMX26_01003 0.50 -0.9 1,054,909 - MPMX26_01003 0.52 -1.1 1,054,912 - MPMX26_01003 0.52 -1.2 1,054,923 - MPMX26_01003 0.53 -1.3 1,054,966 - MPMX26_01003 0.56 -0.8 1,054,969 - MPMX26_01003 0.56 -1.5 1,054,977 - MPMX26_01003 0.57 -1.4 1,054,980 - MPMX26_01003 0.57 -0.5 1,055,015 - MPMX26_01003 0.60 -1.7 1,055,052 - MPMX26_01003 0.62 -0.2 1,055,066 - MPMX26_01003 0.63 -3.3 1,055,074 - MPMX26_01003 0.64 -0.7 1,055,074 - MPMX26_01003 0.64 -1.8 1,055,075 - MPMX26_01003 0.64 -1.3 1,055,085 - MPMX26_01003 0.65 -0.4 1,055,125 - MPMX26_01003 0.68 -0.9 1,055,151 - MPMX26_01003 0.70 -0.4 1,055,221 - MPMX26_01003 0.75 -1.0 1,055,221 - MPMX26_01003 0.75 -0.7 1,055,221 - MPMX26_01003 0.75 -1.7 1,055,221 - MPMX26_01003 0.75 -1.0 1,055,221 - MPMX26_01003 0.75 -0.6 1,055,221 - MPMX26_01003 0.75 -3.0 1,055,234 - MPMX26_01003 0.76 -0.7 1,055,240 - MPMX26_01003 0.76 -2.3 1,055,309 - MPMX26_01003 0.81 -0.8 1,055,309 - MPMX26_01003 0.81 -1.9 1,055,309 - MPMX26_01003 0.81 -1.4 1,055,309 - MPMX26_01003 0.81 -0.6 1,055,309 - MPMX26_01003 0.81 -0.3 1,055,324 - MPMX26_01003 0.82 -0.9 1,055,327 - MPMX26_01003 0.82 -1.5 1,055,347 - MPMX26_01003 0.84 -0.8 1,055,375 - MPMX26_01003 0.86 -1.0 1,055,448 - -1.3 1,055,454 - -1.0 1,055,468 - -1.4 1,055,468 - -1.7 1,055,468 - -0.5 1,055,468 - -1.0 1,055,513 - -1.3 1,055,513 - -1.1 1,055,576 - -0.7 1,055,576 - +0.0 1,055,576 - -0.4 1,055,576 - +0.1 1,055,576 - -0.6 1,055,604 - +0.1 1,055,604 - +0.0 1,055,639 - +0.0 1,055,639 - -0.2 1,055,647 - -0.8 1,055,658 - -1.2 1,055,693 - +0.8 1,055,698 - +0.6 1,055,706 - -0.2 1,055,707 - +0.1 1,055,707 - -0.7 1,055,722 - +0.1 1,055,722 - +1.0 1,055,722 - +0.0 1,055,722 - -0.3
Or see this region's nucleotide sequence