Experiment: Urea (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_00528 and MPMX26_00529 are separated by 11 nucleotides MPMX26_00529 and MPMX26_00530 are separated by 3 nucleotides MPMX26_00530 and MPMX26_00531 are separated by 625 nucleotides
MPMX26_00528: MPMX26_00528 - NAD(P) transhydrogenase subunit alpha part 1, at 558,834 to 559,961
_00528
MPMX26_00529: MPMX26_00529 - NAD(P) transhydrogenase subunit alpha, at 559,973 to 560,296
_00529
MPMX26_00530: MPMX26_00530 - NAD(P) transhydrogenase subunit beta, at 560,300 to 561,757
_00530
MPMX26_00531: MPMX26_00531 - Ribosomal silencing factor RsfS, at 562,383 to 562,784
_00531
Position (kb)
560
561
562 Strain fitness (log2 ratio)
-2
-1
0
1 at 559.931 kb on - strand at 559.946 kb on + strand at 560.402 kb on + strand at 560.527 kb on + strand, within MPMX26_00530 at 560.755 kb on + strand, within MPMX26_00530 at 560.835 kb on + strand, within MPMX26_00530 at 560.950 kb on + strand, within MPMX26_00530 at 561.096 kb on + strand, within MPMX26_00530 at 561.125 kb on + strand, within MPMX26_00530 at 561.125 kb on + strand, within MPMX26_00530 at 561.125 kb on + strand, within MPMX26_00530 at 561.169 kb on + strand, within MPMX26_00530 at 561.169 kb on + strand, within MPMX26_00530 at 561.274 kb on - strand, within MPMX26_00530 at 561.305 kb on + strand, within MPMX26_00530 at 561.305 kb on + strand, within MPMX26_00530 at 561.329 kb on + strand, within MPMX26_00530 at 561.361 kb on + strand, within MPMX26_00530 at 561.371 kb on - strand, within MPMX26_00530 at 561.545 kb on + strand, within MPMX26_00530 at 561.749 kb on + strand at 562.087 kb on + strand at 562.388 kb on - strand at 562.388 kb on - strand at 562.388 kb on - strand at 562.388 kb on - strand at 562.400 kb on - strand at 562.424 kb on - strand, within MPMX26_00531 at 562.463 kb on - strand, within MPMX26_00531 at 562.464 kb on - strand, within MPMX26_00531 at 562.466 kb on - strand, within MPMX26_00531 at 562.471 kb on - strand, within MPMX26_00531 at 562.471 kb on - strand, within MPMX26_00531 at 562.574 kb on - strand, within MPMX26_00531 at 562.594 kb on - strand, within MPMX26_00531 at 562.667 kb on - strand, within MPMX26_00531 at 562.677 kb on + strand, within MPMX26_00531 at 562.685 kb on - strand, within MPMX26_00531 at 562.685 kb on - strand, within MPMX26_00531 at 562.685 kb on - strand, within MPMX26_00531 at 562.715 kb on - strand, within MPMX26_00531 at 562.715 kb on - strand, within MPMX26_00531 at 562.717 kb on - strand, within MPMX26_00531 at 562.725 kb on - strand, within MPMX26_00531
Per-strain Table
Position Strand Gene LocusTag Fraction Urea (N) remove 559,931 - -1.4 559,946 + -0.2 560,402 + -1.4 560,527 + MPMX26_00530 0.16 +0.4 560,755 + MPMX26_00530 0.31 -0.5 560,835 + MPMX26_00530 0.37 -1.6 560,950 + MPMX26_00530 0.45 -1.0 561,096 + MPMX26_00530 0.55 +0.3 561,125 + MPMX26_00530 0.57 -1.6 561,125 + MPMX26_00530 0.57 -1.6 561,125 + MPMX26_00530 0.57 -0.8 561,169 + MPMX26_00530 0.60 +0.3 561,169 + MPMX26_00530 0.60 -2.2 561,274 - MPMX26_00530 0.67 -1.7 561,305 + MPMX26_00530 0.69 -1.3 561,305 + MPMX26_00530 0.69 +0.3 561,329 + MPMX26_00530 0.71 -1.2 561,361 + MPMX26_00530 0.73 -1.6 561,371 - MPMX26_00530 0.73 -1.5 561,545 + MPMX26_00530 0.85 -0.3 561,749 + +0.5 562,087 + -0.5 562,388 - +0.1 562,388 - +0.2 562,388 - +0.6 562,388 - +0.2 562,400 - +0.2 562,424 - MPMX26_00531 0.10 +0.7 562,463 - MPMX26_00531 0.20 +0.3 562,464 - MPMX26_00531 0.20 +0.1 562,466 - MPMX26_00531 0.21 +0.7 562,471 - MPMX26_00531 0.22 +0.5 562,471 - MPMX26_00531 0.22 -0.4 562,574 - MPMX26_00531 0.48 -0.4 562,594 - MPMX26_00531 0.52 -0.0 562,667 - MPMX26_00531 0.71 +0.3 562,677 + MPMX26_00531 0.73 +0.4 562,685 - MPMX26_00531 0.75 +0.5 562,685 - MPMX26_00531 0.75 -0.1 562,685 - MPMX26_00531 0.75 +0.4 562,715 - MPMX26_00531 0.83 +0.7 562,715 - MPMX26_00531 0.83 -0.5 562,717 - MPMX26_00531 0.83 -0.7 562,725 - MPMX26_00531 0.85 +0.5
Or see this region's nucleotide sequence