Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00375

Experiment: Urea (N)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_00373 and MPMX26_00374 are separated by 156 nucleotidesMPMX26_00374 and MPMX26_00375 are separated by 12 nucleotidesMPMX26_00375 and MPMX26_00376 are separated by 163 nucleotides MPMX26_00373: MPMX26_00373 - Putative cation/proton antiporter YbaL, at 404,526 to 406,244 _00373 MPMX26_00374: MPMX26_00374 - 50S ribosomal protein L33, at 406,401 to 406,556 _00374 MPMX26_00375: MPMX26_00375 - 50S ribosomal protein L28, at 406,569 to 406,805 _00375 MPMX26_00376: MPMX26_00376 - Coniferyl aldehyde dehydrogenase, at 406,969 to 408,417 _00376 Position (kb) 406 407Strain fitness (log2 ratio) -2 -1 0 1 2at 405.575 kb on - strand, within MPMX26_00373at 405.575 kb on - strand, within MPMX26_00373at 405.575 kb on - strand, within MPMX26_00373at 405.585 kb on - strand, within MPMX26_00373at 405.681 kb on - strand, within MPMX26_00373at 405.761 kb on - strand, within MPMX26_00373at 405.771 kb on + strand, within MPMX26_00373at 405.822 kb on - strand, within MPMX26_00373at 405.822 kb on - strand, within MPMX26_00373at 405.822 kb on - strand, within MPMX26_00373at 405.822 kb on - strand, within MPMX26_00373at 405.837 kb on - strand, within MPMX26_00373at 405.839 kb on - strand, within MPMX26_00373at 405.866 kb on - strand, within MPMX26_00373at 405.896 kb on - strand, within MPMX26_00373at 405.896 kb on - strand, within MPMX26_00373at 405.896 kb on - strand, within MPMX26_00373at 405.896 kb on - strand, within MPMX26_00373at 405.896 kb on - strand, within MPMX26_00373at 405.915 kb on - strand, within MPMX26_00373at 405.921 kb on - strand, within MPMX26_00373at 405.960 kb on - strand, within MPMX26_00373at 405.968 kb on - strand, within MPMX26_00373at 405.968 kb on - strand, within MPMX26_00373at 406.002 kb on - strand, within MPMX26_00373at 406.002 kb on - strand, within MPMX26_00373at 406.046 kb on - strand, within MPMX26_00373at 406.113 kb on - strandat 406.136 kb on - strandat 406.193 kb on - strandat 406.193 kb on - strandat 406.193 kb on - strandat 406.193 kb on - strandat 406.193 kb on - strandat 406.946 kb on - strandat 406.960 kb on - strandat 407.100 kb on - strandat 407.116 kb on - strand, within MPMX26_00376at 407.116 kb on - strand, within MPMX26_00376at 407.160 kb on - strand, within MPMX26_00376at 407.160 kb on - strand, within MPMX26_00376at 407.160 kb on - strand, within MPMX26_00376at 407.160 kb on - strand, within MPMX26_00376at 407.160 kb on - strand, within MPMX26_00376at 407.160 kb on - strand, within MPMX26_00376at 407.160 kb on - strand, within MPMX26_00376at 407.182 kb on - strand, within MPMX26_00376at 407.209 kb on - strand, within MPMX26_00376at 407.219 kb on - strand, within MPMX26_00376at 407.219 kb on - strand, within MPMX26_00376at 407.219 kb on - strand, within MPMX26_00376at 407.219 kb on - strand, within MPMX26_00376at 407.223 kb on - strand, within MPMX26_00376at 407.244 kb on - strand, within MPMX26_00376at 407.249 kb on - strand, within MPMX26_00376at 407.318 kb on + strand, within MPMX26_00376at 407.331 kb on - strand, within MPMX26_00376at 407.331 kb on - strand, within MPMX26_00376at 407.331 kb on - strand, within MPMX26_00376at 407.331 kb on - strand, within MPMX26_00376at 407.331 kb on - strand, within MPMX26_00376at 407.331 kb on - strand, within MPMX26_00376at 407.331 kb on - strand, within MPMX26_00376at 407.331 kb on - strand, within MPMX26_00376at 407.331 kb on - strand, within MPMX26_00376at 407.331 kb on - strand, within MPMX26_00376at 407.331 kb on - strand, within MPMX26_00376at 407.331 kb on - strand, within MPMX26_00376at 407.331 kb on - strand, within MPMX26_00376at 407.331 kb on - strand, within MPMX26_00376at 407.375 kb on + strand, within MPMX26_00376at 407.391 kb on - strand, within MPMX26_00376at 407.419 kb on - strand, within MPMX26_00376at 407.468 kb on - strand, within MPMX26_00376at 407.477 kb on + strand, within MPMX26_00376at 407.485 kb on - strand, within MPMX26_00376at 407.490 kb on - strand, within MPMX26_00376at 407.582 kb on + strand, within MPMX26_00376at 407.582 kb on + strand, within MPMX26_00376at 407.590 kb on - strand, within MPMX26_00376at 407.592 kb on + strand, within MPMX26_00376at 407.597 kb on + strand, within MPMX26_00376at 407.605 kb on - strand, within MPMX26_00376at 407.605 kb on - strand, within MPMX26_00376at 407.605 kb on - strand, within MPMX26_00376at 407.605 kb on - strand, within MPMX26_00376at 407.611 kb on - strand, within MPMX26_00376at 407.617 kb on + strand, within MPMX26_00376at 407.617 kb on + strand, within MPMX26_00376at 407.618 kb on + strand, within MPMX26_00376at 407.625 kb on - strand, within MPMX26_00376at 407.628 kb on + strand, within MPMX26_00376at 407.628 kb on + strand, within MPMX26_00376at 407.628 kb on + strand, within MPMX26_00376at 407.631 kb on - strand, within MPMX26_00376at 407.633 kb on + strand, within MPMX26_00376at 407.633 kb on + strand, within MPMX26_00376at 407.633 kb on + strand, within MPMX26_00376at 407.633 kb on + strand, within MPMX26_00376at 407.633 kb on + strand, within MPMX26_00376at 407.633 kb on + strand, within MPMX26_00376at 407.633 kb on + strand, within MPMX26_00376at 407.633 kb on + strand, within MPMX26_00376at 407.633 kb on + strand, within MPMX26_00376at 407.633 kb on + strand, within MPMX26_00376at 407.633 kb on + strand, within MPMX26_00376at 407.633 kb on + strand, within MPMX26_00376at 407.633 kb on + strand, within MPMX26_00376at 407.633 kb on + strand, within MPMX26_00376at 407.636 kb on - strand, within MPMX26_00376at 407.636 kb on - strand, within MPMX26_00376at 407.636 kb on - strand, within MPMX26_00376at 407.636 kb on - strand, within MPMX26_00376at 407.641 kb on - strand, within MPMX26_00376at 407.641 kb on - strand, within MPMX26_00376at 407.641 kb on - strand, within MPMX26_00376at 407.641 kb on - strand, within MPMX26_00376at 407.641 kb on - strand, within MPMX26_00376at 407.641 kb on - strand, within MPMX26_00376at 407.641 kb on - strand, within MPMX26_00376at 407.641 kb on - strand, within MPMX26_00376at 407.641 kb on - strand, within MPMX26_00376at 407.641 kb on - strand, within MPMX26_00376at 407.641 kb on - strand, within MPMX26_00376at 407.641 kb on - strand, within MPMX26_00376at 407.641 kb on - strand, within MPMX26_00376at 407.656 kb on - strand, within MPMX26_00376at 407.669 kb on + strand, within MPMX26_00376at 407.669 kb on + strand, within MPMX26_00376at 407.679 kb on + strand, within MPMX26_00376at 407.687 kb on - strand, within MPMX26_00376at 407.687 kb on - strand, within MPMX26_00376at 407.687 kb on - strand, within MPMX26_00376at 407.705 kb on + strand, within MPMX26_00376at 407.707 kb on + strand, within MPMX26_00376at 407.715 kb on - strand, within MPMX26_00376at 407.715 kb on - strand, within MPMX26_00376at 407.715 kb on - strand, within MPMX26_00376at 407.715 kb on - strand, within MPMX26_00376at 407.736 kb on + strand, within MPMX26_00376at 407.736 kb on + strand, within MPMX26_00376at 407.744 kb on - strand, within MPMX26_00376at 407.744 kb on - strand, within MPMX26_00376at 407.791 kb on - strand, within MPMX26_00376at 407.791 kb on - strand, within MPMX26_00376at 407.791 kb on - strand, within MPMX26_00376at 407.791 kb on - strand, within MPMX26_00376at 407.791 kb on - strand, within MPMX26_00376at 407.791 kb on - strand, within MPMX26_00376at 407.791 kb on - strand, within MPMX26_00376at 407.791 kb on - strand, within MPMX26_00376at 407.791 kb on - strand, within MPMX26_00376at 407.791 kb on - strand, within MPMX26_00376

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction Urea (N)
remove
405,575 - MPMX26_00373 0.61 +0.4
405,575 - MPMX26_00373 0.61 -0.2
405,575 - MPMX26_00373 0.61 -0.1
405,585 - MPMX26_00373 0.62 -0.3
405,681 - MPMX26_00373 0.67 +0.2
405,761 - MPMX26_00373 0.72 +0.1
405,771 + MPMX26_00373 0.72 +0.1
405,822 - MPMX26_00373 0.75 +1.0
405,822 - MPMX26_00373 0.75 +0.0
405,822 - MPMX26_00373 0.75 -0.2
405,822 - MPMX26_00373 0.75 -0.2
405,837 - MPMX26_00373 0.76 +0.2
405,839 - MPMX26_00373 0.76 +0.7
405,866 - MPMX26_00373 0.78 +0.8
405,896 - MPMX26_00373 0.80 -1.2
405,896 - MPMX26_00373 0.80 -0.5
405,896 - MPMX26_00373 0.80 -0.2
405,896 - MPMX26_00373 0.80 +0.3
405,896 - MPMX26_00373 0.80 -0.1
405,915 - MPMX26_00373 0.81 -0.0
405,921 - MPMX26_00373 0.81 +0.0
405,960 - MPMX26_00373 0.83 +0.8
405,968 - MPMX26_00373 0.84 -0.1
405,968 - MPMX26_00373 0.84 -0.2
406,002 - MPMX26_00373 0.86 -0.2
406,002 - MPMX26_00373 0.86 +1.0
406,046 - MPMX26_00373 0.88 -0.0
406,113 - +0.4
406,136 - -0.2
406,193 - +0.6
406,193 - -0.3
406,193 - -1.8
406,193 - -0.1
406,193 - +0.6
406,946 - +0.3
406,960 - +0.2
407,100 - -0.1
407,116 - MPMX26_00376 0.10 -0.2
407,116 - MPMX26_00376 0.10 +0.0
407,160 - MPMX26_00376 0.13 +0.1
407,160 - MPMX26_00376 0.13 +0.3
407,160 - MPMX26_00376 0.13 +0.6
407,160 - MPMX26_00376 0.13 -0.4
407,160 - MPMX26_00376 0.13 +0.8
407,160 - MPMX26_00376 0.13 +0.4
407,160 - MPMX26_00376 0.13 +0.0
407,182 - MPMX26_00376 0.15 -0.2
407,209 - MPMX26_00376 0.17 -0.6
407,219 - MPMX26_00376 0.17 -0.4
407,219 - MPMX26_00376 0.17 +0.0
407,219 - MPMX26_00376 0.17 +0.3
407,219 - MPMX26_00376 0.17 -0.2
407,223 - MPMX26_00376 0.18 +0.9
407,244 - MPMX26_00376 0.19 -0.1
407,249 - MPMX26_00376 0.19 +0.2
407,318 + MPMX26_00376 0.24 -0.3
407,331 - MPMX26_00376 0.25 -0.3
407,331 - MPMX26_00376 0.25 +0.5
407,331 - MPMX26_00376 0.25 +0.6
407,331 - MPMX26_00376 0.25 +0.6
407,331 - MPMX26_00376 0.25 -0.1
407,331 - MPMX26_00376 0.25 +0.3
407,331 - MPMX26_00376 0.25 +0.2
407,331 - MPMX26_00376 0.25 -0.1
407,331 - MPMX26_00376 0.25 +0.5
407,331 - MPMX26_00376 0.25 -0.1
407,331 - MPMX26_00376 0.25 -0.2
407,331 - MPMX26_00376 0.25 +0.2
407,331 - MPMX26_00376 0.25 -0.0
407,331 - MPMX26_00376 0.25 -0.2
407,375 + MPMX26_00376 0.28 +0.8
407,391 - MPMX26_00376 0.29 +0.1
407,419 - MPMX26_00376 0.31 +0.1
407,468 - MPMX26_00376 0.34 -2.6
407,477 + MPMX26_00376 0.35 +0.7
407,485 - MPMX26_00376 0.36 -0.3
407,490 - MPMX26_00376 0.36 -0.1
407,582 + MPMX26_00376 0.42 -0.2
407,582 + MPMX26_00376 0.42 +0.8
407,590 - MPMX26_00376 0.43 -0.0
407,592 + MPMX26_00376 0.43 -0.4
407,597 + MPMX26_00376 0.43 -1.1
407,605 - MPMX26_00376 0.44 -0.7
407,605 - MPMX26_00376 0.44 +0.1
407,605 - MPMX26_00376 0.44 +0.1
407,605 - MPMX26_00376 0.44 -0.0
407,611 - MPMX26_00376 0.44 +0.9
407,617 + MPMX26_00376 0.45 -0.6
407,617 + MPMX26_00376 0.45 -0.1
407,618 + MPMX26_00376 0.45 +1.8
407,625 - MPMX26_00376 0.45 -0.3
407,628 + MPMX26_00376 0.45 +1.1
407,628 + MPMX26_00376 0.45 +0.4
407,628 + MPMX26_00376 0.45 +0.9
407,631 - MPMX26_00376 0.46 +0.0
407,633 + MPMX26_00376 0.46 -0.1
407,633 + MPMX26_00376 0.46 -0.2
407,633 + MPMX26_00376 0.46 -0.7
407,633 + MPMX26_00376 0.46 -0.4
407,633 + MPMX26_00376 0.46 -0.2
407,633 + MPMX26_00376 0.46 -0.1
407,633 + MPMX26_00376 0.46 -0.6
407,633 + MPMX26_00376 0.46 -0.4
407,633 + MPMX26_00376 0.46 +0.2
407,633 + MPMX26_00376 0.46 +0.9
407,633 + MPMX26_00376 0.46 +0.4
407,633 + MPMX26_00376 0.46 +0.2
407,633 + MPMX26_00376 0.46 -1.2
407,633 + MPMX26_00376 0.46 +0.1
407,636 - MPMX26_00376 0.46 +0.3
407,636 - MPMX26_00376 0.46 -0.5
407,636 - MPMX26_00376 0.46 -0.4
407,636 - MPMX26_00376 0.46 -0.6
407,641 - MPMX26_00376 0.46 +0.3
407,641 - MPMX26_00376 0.46 +0.2
407,641 - MPMX26_00376 0.46 +0.0
407,641 - MPMX26_00376 0.46 +0.4
407,641 - MPMX26_00376 0.46 -0.1
407,641 - MPMX26_00376 0.46 -0.4
407,641 - MPMX26_00376 0.46 +0.2
407,641 - MPMX26_00376 0.46 -0.5
407,641 - MPMX26_00376 0.46 -0.7
407,641 - MPMX26_00376 0.46 +0.1
407,641 - MPMX26_00376 0.46 +0.4
407,641 - MPMX26_00376 0.46 -0.2
407,641 - MPMX26_00376 0.46 -0.4
407,656 - MPMX26_00376 0.47 -0.2
407,669 + MPMX26_00376 0.48 +0.7
407,669 + MPMX26_00376 0.48 +0.6
407,679 + MPMX26_00376 0.49 +0.1
407,687 - MPMX26_00376 0.50 +0.7
407,687 - MPMX26_00376 0.50 -0.0
407,687 - MPMX26_00376 0.50 -1.0
407,705 + MPMX26_00376 0.51 +0.1
407,707 + MPMX26_00376 0.51 +1.1
407,715 - MPMX26_00376 0.51 +0.1
407,715 - MPMX26_00376 0.51 +0.3
407,715 - MPMX26_00376 0.51 -0.1
407,715 - MPMX26_00376 0.51 +0.5
407,736 + MPMX26_00376 0.53 -1.8
407,736 + MPMX26_00376 0.53 -0.1
407,744 - MPMX26_00376 0.53 +0.2
407,744 - MPMX26_00376 0.53 +0.2
407,791 - MPMX26_00376 0.57 +0.8
407,791 - MPMX26_00376 0.57 -0.3
407,791 - MPMX26_00376 0.57 +1.5
407,791 - MPMX26_00376 0.57 -0.2
407,791 - MPMX26_00376 0.57 +0.0
407,791 - MPMX26_00376 0.57 +0.4
407,791 - MPMX26_00376 0.57 -1.2
407,791 - MPMX26_00376 0.57 -0.6
407,791 - MPMX26_00376 0.57 +0.2
407,791 - MPMX26_00376 0.57 -0.2

Or see this region's nucleotide sequence