Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00192

Experiment: Urea (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00191 and MPMX26_00192 are separated by 9 nucleotidesMPMX26_00192 and MPMX26_00193 are separated by 166 nucleotidesMPMX26_00193 and MPMX26_00194 are separated by 165 nucleotides MPMX26_00191: MPMX26_00191 - hypothetical protein, at 205,900 to 207,093 _00191 MPMX26_00192: MPMX26_00192 - 1,4-dihydroxy-2-naphthoyl-CoA hydrolase, at 207,103 to 207,540 _00192 MPMX26_00193: MPMX26_00193 - Trans-acting regulatory protein HvrA, at 207,707 to 208,033 _00193 MPMX26_00194: MPMX26_00194 - hypothetical protein, at 208,199 to 208,942 _00194 Position (kb) 207 208Strain fitness (log2 ratio) -2 -1 0 1 2at 206.108 kb on + strand, within MPMX26_00191at 206.108 kb on + strand, within MPMX26_00191at 206.108 kb on + strand, within MPMX26_00191at 206.108 kb on + strand, within MPMX26_00191at 206.116 kb on - strand, within MPMX26_00191at 206.118 kb on + strand, within MPMX26_00191at 206.118 kb on + strand, within MPMX26_00191at 206.118 kb on + strand, within MPMX26_00191at 206.118 kb on + strand, within MPMX26_00191at 206.132 kb on + strand, within MPMX26_00191at 206.169 kb on + strand, within MPMX26_00191at 206.187 kb on + strand, within MPMX26_00191at 206.187 kb on + strand, within MPMX26_00191at 206.193 kb on + strand, within MPMX26_00191at 206.242 kb on + strand, within MPMX26_00191at 206.242 kb on + strand, within MPMX26_00191at 206.242 kb on + strand, within MPMX26_00191at 206.269 kb on + strand, within MPMX26_00191at 206.269 kb on + strand, within MPMX26_00191at 206.286 kb on + strand, within MPMX26_00191at 206.311 kb on + strand, within MPMX26_00191at 206.336 kb on + strand, within MPMX26_00191at 206.351 kb on + strand, within MPMX26_00191at 206.397 kb on + strand, within MPMX26_00191at 206.430 kb on + strand, within MPMX26_00191at 206.431 kb on + strand, within MPMX26_00191at 206.444 kb on + strand, within MPMX26_00191at 206.477 kb on + strand, within MPMX26_00191at 206.487 kb on + strand, within MPMX26_00191at 206.487 kb on + strand, within MPMX26_00191at 206.515 kb on + strand, within MPMX26_00191at 206.521 kb on + strand, within MPMX26_00191at 206.587 kb on + strand, within MPMX26_00191at 206.665 kb on + strand, within MPMX26_00191at 206.893 kb on + strand, within MPMX26_00191at 206.945 kb on + strand, within MPMX26_00191at 207.000 kb on + strandat 207.000 kb on + strandat 207.111 kb on + strandat 207.119 kb on - strandat 207.131 kb on + strandat 207.162 kb on + strand, within MPMX26_00192at 207.167 kb on + strand, within MPMX26_00192at 207.235 kb on + strand, within MPMX26_00192at 207.235 kb on + strand, within MPMX26_00192at 207.235 kb on + strand, within MPMX26_00192at 207.244 kb on + strand, within MPMX26_00192at 207.258 kb on + strand, within MPMX26_00192at 207.275 kb on + strand, within MPMX26_00192at 207.275 kb on + strand, within MPMX26_00192at 207.285 kb on + strand, within MPMX26_00192at 207.294 kb on + strand, within MPMX26_00192at 207.306 kb on + strand, within MPMX26_00192at 207.306 kb on + strand, within MPMX26_00192at 207.338 kb on + strand, within MPMX26_00192at 207.338 kb on + strand, within MPMX26_00192at 207.338 kb on + strand, within MPMX26_00192at 207.338 kb on + strand, within MPMX26_00192at 207.348 kb on + strand, within MPMX26_00192at 207.349 kb on + strand, within MPMX26_00192at 207.382 kb on + strand, within MPMX26_00192at 207.395 kb on - strand, within MPMX26_00192at 207.442 kb on + strand, within MPMX26_00192at 207.442 kb on + strand, within MPMX26_00192at 207.442 kb on + strand, within MPMX26_00192at 207.442 kb on + strand, within MPMX26_00192at 207.442 kb on + strand, within MPMX26_00192at 207.442 kb on + strand, within MPMX26_00192at 207.442 kb on + strand, within MPMX26_00192at 207.442 kb on + strand, within MPMX26_00192at 207.442 kb on + strand, within MPMX26_00192at 207.585 kb on + strandat 207.687 kb on + strandat 207.687 kb on + strandat 207.687 kb on + strandat 207.687 kb on + strandat 207.687 kb on + strandat 207.687 kb on + strandat 207.701 kb on + strandat 207.757 kb on + strand, within MPMX26_00193at 207.802 kb on + strand, within MPMX26_00193at 207.813 kb on + strand, within MPMX26_00193at 207.845 kb on + strand, within MPMX26_00193at 207.845 kb on + strand, within MPMX26_00193at 207.845 kb on + strand, within MPMX26_00193at 207.845 kb on + strand, within MPMX26_00193at 207.852 kb on + strand, within MPMX26_00193at 207.892 kb on + strand, within MPMX26_00193at 207.901 kb on + strand, within MPMX26_00193at 207.949 kb on + strand, within MPMX26_00193at 207.949 kb on + strand, within MPMX26_00193at 207.981 kb on + strand, within MPMX26_00193at 207.981 kb on + strand, within MPMX26_00193at 207.981 kb on + strand, within MPMX26_00193at 207.995 kb on + strand, within MPMX26_00193at 208.058 kb on + strandat 208.058 kb on + strandat 208.058 kb on + strandat 208.058 kb on + strandat 208.058 kb on + strandat 208.058 kb on + strandat 208.199 kb on + strandat 208.265 kb on + strandat 208.283 kb on + strand, within MPMX26_00194at 208.336 kb on + strand, within MPMX26_00194at 208.351 kb on + strand, within MPMX26_00194at 208.351 kb on + strand, within MPMX26_00194at 208.381 kb on + strand, within MPMX26_00194at 208.471 kb on + strand, within MPMX26_00194at 208.474 kb on + strand, within MPMX26_00194at 208.486 kb on + strand, within MPMX26_00194at 208.486 kb on + strand, within MPMX26_00194at 208.486 kb on + strand, within MPMX26_00194at 208.486 kb on + strand, within MPMX26_00194at 208.486 kb on + strand, within MPMX26_00194at 208.494 kb on - strand, within MPMX26_00194at 208.528 kb on + strand, within MPMX26_00194at 208.528 kb on + strand, within MPMX26_00194

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Per-strain Table

Position Strand Gene LocusTag Fraction Urea (N)
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206,108 + MPMX26_00191 0.17 -0.7
206,108 + MPMX26_00191 0.17 +0.8
206,108 + MPMX26_00191 0.17 -0.3
206,108 + MPMX26_00191 0.17 +1.2
206,116 - MPMX26_00191 0.18 -0.1
206,118 + MPMX26_00191 0.18 -0.7
206,118 + MPMX26_00191 0.18 -0.1
206,118 + MPMX26_00191 0.18 -0.0
206,118 + MPMX26_00191 0.18 +0.4
206,132 + MPMX26_00191 0.19 +1.1
206,169 + MPMX26_00191 0.23 +2.0
206,187 + MPMX26_00191 0.24 +0.6
206,187 + MPMX26_00191 0.24 -0.5
206,193 + MPMX26_00191 0.25 +0.3
206,242 + MPMX26_00191 0.29 +0.7
206,242 + MPMX26_00191 0.29 +0.4
206,242 + MPMX26_00191 0.29 +0.0
206,269 + MPMX26_00191 0.31 +0.8
206,269 + MPMX26_00191 0.31 +1.3
206,286 + MPMX26_00191 0.32 +0.8
206,311 + MPMX26_00191 0.34 +0.2
206,336 + MPMX26_00191 0.37 -1.5
206,351 + MPMX26_00191 0.38 +0.5
206,397 + MPMX26_00191 0.42 +0.3
206,430 + MPMX26_00191 0.44 +0.1
206,431 + MPMX26_00191 0.44 +0.8
206,444 + MPMX26_00191 0.46 +1.5
206,477 + MPMX26_00191 0.48 +0.9
206,487 + MPMX26_00191 0.49 -0.0
206,487 + MPMX26_00191 0.49 -0.0
206,515 + MPMX26_00191 0.52 +0.3
206,521 + MPMX26_00191 0.52 +0.1
206,587 + MPMX26_00191 0.58 +0.0
206,665 + MPMX26_00191 0.64 +0.2
206,893 + MPMX26_00191 0.83 +0.3
206,945 + MPMX26_00191 0.88 +0.1
207,000 + -0.4
207,000 + +0.8
207,111 + -0.1
207,119 - -0.1
207,131 + +0.6
207,162 + MPMX26_00192 0.13 -0.0
207,167 + MPMX26_00192 0.15 -0.6
207,235 + MPMX26_00192 0.30 -0.3
207,235 + MPMX26_00192 0.30 -0.5
207,235 + MPMX26_00192 0.30 -0.2
207,244 + MPMX26_00192 0.32 -0.3
207,258 + MPMX26_00192 0.35 -0.5
207,275 + MPMX26_00192 0.39 -0.2
207,275 + MPMX26_00192 0.39 -0.1
207,285 + MPMX26_00192 0.42 -0.3
207,294 + MPMX26_00192 0.44 +0.1
207,306 + MPMX26_00192 0.46 -0.8
207,306 + MPMX26_00192 0.46 -0.9
207,338 + MPMX26_00192 0.54 -1.2
207,338 + MPMX26_00192 0.54 +0.5
207,338 + MPMX26_00192 0.54 -0.9
207,338 + MPMX26_00192 0.54 +0.0
207,348 + MPMX26_00192 0.56 -0.5
207,349 + MPMX26_00192 0.56 +0.2
207,382 + MPMX26_00192 0.64 +0.7
207,395 - MPMX26_00192 0.67 -0.7
207,442 + MPMX26_00192 0.77 -0.0
207,442 + MPMX26_00192 0.77 +0.4
207,442 + MPMX26_00192 0.77 -0.4
207,442 + MPMX26_00192 0.77 +0.3
207,442 + MPMX26_00192 0.77 -0.5
207,442 + MPMX26_00192 0.77 -0.1
207,442 + MPMX26_00192 0.77 -0.0
207,442 + MPMX26_00192 0.77 -0.4
207,442 + MPMX26_00192 0.77 -0.3
207,585 + -0.5
207,687 + -0.4
207,687 + -0.1
207,687 + +0.7
207,687 + -0.7
207,687 + -1.9
207,687 + -0.7
207,701 + -1.6
207,757 + MPMX26_00193 0.15 +0.0
207,802 + MPMX26_00193 0.29 -0.1
207,813 + MPMX26_00193 0.32 -1.7
207,845 + MPMX26_00193 0.42 -0.4
207,845 + MPMX26_00193 0.42 -0.7
207,845 + MPMX26_00193 0.42 -0.8
207,845 + MPMX26_00193 0.42 -0.6
207,852 + MPMX26_00193 0.44 +0.7
207,892 + MPMX26_00193 0.57 +0.3
207,901 + MPMX26_00193 0.59 +0.1
207,949 + MPMX26_00193 0.74 -0.8
207,949 + MPMX26_00193 0.74 -0.7
207,981 + MPMX26_00193 0.84 +0.6
207,981 + MPMX26_00193 0.84 -1.0
207,981 + MPMX26_00193 0.84 -0.1
207,995 + MPMX26_00193 0.88 -0.1
208,058 + +0.5
208,058 + -0.5
208,058 + -0.2
208,058 + +0.0
208,058 + +0.4
208,058 + +0.2
208,199 + +0.5
208,265 + +0.6
208,283 + MPMX26_00194 0.11 -0.2
208,336 + MPMX26_00194 0.18 -1.1
208,351 + MPMX26_00194 0.20 +0.4
208,351 + MPMX26_00194 0.20 +1.3
208,381 + MPMX26_00194 0.24 -1.0
208,471 + MPMX26_00194 0.37 +0.9
208,474 + MPMX26_00194 0.37 +0.3
208,486 + MPMX26_00194 0.39 +0.4
208,486 + MPMX26_00194 0.39 +0.5
208,486 + MPMX26_00194 0.39 -1.2
208,486 + MPMX26_00194 0.39 -0.3
208,486 + MPMX26_00194 0.39 +0.5
208,494 - MPMX26_00194 0.40 -0.3
208,528 + MPMX26_00194 0.44 +0.2
208,528 + MPMX26_00194 0.44 +0.3

Or see this region's nucleotide sequence