Experiment: phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EFB2_00541 and EFB2_00542 are separated by 4 nucleotides EFB2_00542 and EFB2_00543 overlap by 4 nucleotides EFB2_00543 and EFB2_00544 overlap by 25 nucleotides
EFB2_00541: EFB2_00541 - Threonylcarbamoyl-AMP synthase, at 546,554 to 547,126
_00541
EFB2_00542: EFB2_00542 - Shikimate dehydrogenase (NADP(+)), at 547,131 to 547,949
_00542
EFB2_00543: EFB2_00543 - hypothetical protein, at 547,946 to 548,203
_00543
EFB2_00544: EFB2_00544 - Protein YrdA, at 548,179 to 548,733
_00544
Position (kb) 547
548
549 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 547.124 kb on + strand at 547.124 kb on + strand at 547.129 kb on + strand at 547.129 kb on + strand at 547.129 kb on + strand at 547.129 kb on + strand at 547.129 kb on + strand at 547.129 kb on + strand at 547.130 kb on - strand at 547.130 kb on - strand at 547.130 kb on - strand at 547.130 kb on - strand at 547.130 kb on - strand at 547.130 kb on - strand at 547.130 kb on - strand at 547.130 kb on - strand at 547.130 kb on - strand at 547.130 kb on - strand at 547.130 kb on - strand at 547.140 kb on + strand at 547.140 kb on + strand at 547.140 kb on + strand at 547.140 kb on + strand at 547.140 kb on + strand at 547.140 kb on + strand at 547.140 kb on + strand at 547.140 kb on + strand at 547.140 kb on + strand at 547.140 kb on + strand at 547.140 kb on + strand at 547.140 kb on + strand at 547.140 kb on + strand at 547.140 kb on + strand at 547.140 kb on + strand at 547.140 kb on + strand at 547.140 kb on + strand at 547.141 kb on - strand at 547.141 kb on - strand at 547.141 kb on - strand at 547.141 kb on - strand at 547.141 kb on - strand at 547.141 kb on - strand at 547.141 kb on - strand at 547.141 kb on - strand at 547.141 kb on - strand at 547.214 kb on + strand, within EFB2_00542 at 547.214 kb on + strand, within EFB2_00542 at 547.215 kb on - strand, within EFB2_00542 at 547.215 kb on - strand, within EFB2_00542 at 547.215 kb on - strand, within EFB2_00542 at 547.227 kb on + strand, within EFB2_00542 at 547.227 kb on + strand, within EFB2_00542 at 547.228 kb on - strand, within EFB2_00542 at 547.283 kb on + strand, within EFB2_00542 at 547.284 kb on - strand, within EFB2_00542 at 547.295 kb on + strand, within EFB2_00542 at 547.296 kb on - strand, within EFB2_00542 at 547.322 kb on + strand, within EFB2_00542 at 547.322 kb on + strand, within EFB2_00542 at 547.323 kb on - strand, within EFB2_00542 at 547.355 kb on + strand, within EFB2_00542 at 547.355 kb on + strand, within EFB2_00542 at 547.385 kb on + strand, within EFB2_00542 at 547.385 kb on + strand, within EFB2_00542 at 547.385 kb on + strand, within EFB2_00542 at 547.385 kb on + strand, within EFB2_00542 at 547.385 kb on + strand, within EFB2_00542 at 547.386 kb on - strand, within EFB2_00542 at 547.386 kb on - strand, within EFB2_00542 at 547.386 kb on - strand, within EFB2_00542 at 547.403 kb on - strand, within EFB2_00542 at 547.403 kb on - strand, within EFB2_00542 at 547.439 kb on + strand, within EFB2_00542 at 547.439 kb on + strand, within EFB2_00542 at 547.439 kb on + strand, within EFB2_00542 at 547.439 kb on + strand, within EFB2_00542 at 547.439 kb on + strand, within EFB2_00542 at 547.439 kb on + strand, within EFB2_00542 at 547.439 kb on + strand, within EFB2_00542 at 547.440 kb on - strand, within EFB2_00542 at 547.440 kb on - strand, within EFB2_00542 at 547.440 kb on - strand, within EFB2_00542 at 547.440 kb on - strand, within EFB2_00542 at 547.441 kb on + strand, within EFB2_00542 at 547.441 kb on + strand, within EFB2_00542 at 547.441 kb on + strand, within EFB2_00542 at 547.441 kb on + strand, within EFB2_00542 at 547.441 kb on + strand, within EFB2_00542 at 547.441 kb on + strand, within EFB2_00542 at 547.441 kb on + strand, within EFB2_00542 at 547.441 kb on + strand, within EFB2_00542 at 547.441 kb on + strand, within EFB2_00542 at 547.441 kb on + strand, within EFB2_00542 at 547.441 kb on + strand, within EFB2_00542 at 547.441 kb on + strand, within EFB2_00542 at 547.442 kb on - strand, within EFB2_00542 at 547.442 kb on - strand, within EFB2_00542 at 547.442 kb on - strand, within EFB2_00542 at 547.442 kb on - strand, within EFB2_00542 at 547.442 kb on - strand, within EFB2_00542 at 547.442 kb on - strand, within EFB2_00542 at 547.442 kb on - strand, within EFB2_00542 at 547.442 kb on - strand, within EFB2_00542 at 547.442 kb on - strand, within EFB2_00542 at 547.442 kb on - strand, within EFB2_00542 at 547.442 kb on - strand, within EFB2_00542 at 547.442 kb on - strand, within EFB2_00542 at 547.442 kb on - strand, within EFB2_00542 at 547.442 kb on - strand, within EFB2_00542 at 547.442 kb on - strand, within EFB2_00542 at 547.442 kb on - strand, within EFB2_00542 at 547.451 kb on - strand, within EFB2_00542 at 547.451 kb on - strand, within EFB2_00542 at 547.489 kb on + strand, within EFB2_00542 at 547.489 kb on + strand, within EFB2_00542 at 547.489 kb on + strand, within EFB2_00542 at 547.493 kb on + strand, within EFB2_00542 at 547.493 kb on + strand, within EFB2_00542 at 547.494 kb on - strand, within EFB2_00542 at 547.531 kb on + strand, within EFB2_00542 at 547.531 kb on + strand, within EFB2_00542 at 547.531 kb on + strand, within EFB2_00542 at 547.531 kb on + strand, within EFB2_00542 at 547.531 kb on + strand, within EFB2_00542 at 547.532 kb on - strand, within EFB2_00542 at 547.532 kb on - strand, within EFB2_00542 at 547.532 kb on - strand, within EFB2_00542 at 547.532 kb on - strand, within EFB2_00542 at 547.534 kb on + strand, within EFB2_00542 at 547.534 kb on + strand, within EFB2_00542 at 547.534 kb on + strand, within EFB2_00542 at 547.534 kb on + strand, within EFB2_00542 at 547.534 kb on + strand, within EFB2_00542 at 547.535 kb on - strand, within EFB2_00542 at 547.535 kb on - strand, within EFB2_00542 at 547.535 kb on - strand, within EFB2_00542 at 547.535 kb on - strand, within EFB2_00542 at 547.535 kb on - strand, within EFB2_00542 at 547.535 kb on - strand, within EFB2_00542 at 547.607 kb on + strand, within EFB2_00542 at 547.607 kb on + strand, within EFB2_00542 at 547.608 kb on - strand, within EFB2_00542 at 547.608 kb on - strand, within EFB2_00542 at 547.631 kb on + strand, within EFB2_00542 at 547.632 kb on - strand, within EFB2_00542 at 547.682 kb on + strand, within EFB2_00542 at 547.682 kb on + strand, within EFB2_00542 at 547.683 kb on - strand, within EFB2_00542 at 547.683 kb on - strand, within EFB2_00542 at 547.683 kb on - strand, within EFB2_00542 at 547.685 kb on + strand, within EFB2_00542 at 547.685 kb on + strand, within EFB2_00542 at 547.686 kb on - strand, within EFB2_00542 at 547.686 kb on - strand, within EFB2_00542 at 547.715 kb on + strand, within EFB2_00542 at 547.715 kb on + strand, within EFB2_00542 at 547.715 kb on + strand, within EFB2_00542 at 547.755 kb on + strand, within EFB2_00542 at 547.755 kb on + strand, within EFB2_00542 at 547.755 kb on + strand, within EFB2_00542 at 547.755 kb on + strand, within EFB2_00542 at 547.755 kb on + strand, within EFB2_00542 at 547.755 kb on + strand, within EFB2_00542 at 547.755 kb on + strand, within EFB2_00542 at 547.755 kb on + strand, within EFB2_00542 at 547.755 kb on + strand, within EFB2_00542 at 547.755 kb on + strand, within EFB2_00542 at 547.756 kb on - strand, within EFB2_00542 at 547.756 kb on - strand, within EFB2_00542 at 547.756 kb on - strand, within EFB2_00542 at 547.756 kb on - strand, within EFB2_00542 at 547.756 kb on - strand, within EFB2_00542 at 547.756 kb on - strand, within EFB2_00542 at 547.756 kb on - strand, within EFB2_00542 at 547.756 kb on - strand, within EFB2_00542 at 547.756 kb on - strand, within EFB2_00542 at 547.756 kb on - strand, within EFB2_00542 at 547.756 kb on - strand, within EFB2_00542 at 547.756 kb on - strand, within EFB2_00542 at 547.761 kb on + strand, within EFB2_00542 at 547.762 kb on - strand, within EFB2_00542 at 547.762 kb on - strand, within EFB2_00542 at 547.762 kb on - strand, within EFB2_00542 at 547.762 kb on - strand, within EFB2_00542 at 547.773 kb on + strand, within EFB2_00542 at 547.773 kb on + strand, within EFB2_00542 at 547.774 kb on - strand, within EFB2_00542 at 547.774 kb on - strand, within EFB2_00542 at 547.774 kb on - strand, within EFB2_00542 at 547.774 kb on - strand, within EFB2_00542 at 547.829 kb on + strand, within EFB2_00542 at 547.829 kb on + strand, within EFB2_00542 at 547.829 kb on + strand, within EFB2_00542 at 547.829 kb on + strand, within EFB2_00542 at 547.829 kb on + strand, within EFB2_00542 at 547.830 kb on - strand, within EFB2_00542 at 547.830 kb on - strand, within EFB2_00542 at 547.830 kb on - strand, within EFB2_00542 at 547.830 kb on - strand, within EFB2_00542 at 547.830 kb on - strand, within EFB2_00542 at 547.843 kb on + strand, within EFB2_00542 at 547.844 kb on - strand, within EFB2_00542 at 547.906 kb on + strand at 547.906 kb on + strand at 547.906 kb on + strand at 547.906 kb on + strand at 547.906 kb on + strand at 547.906 kb on + strand at 547.906 kb on + strand at 547.906 kb on + strand at 547.906 kb on + strand at 547.906 kb on + strand at 547.906 kb on + strand at 547.907 kb on - strand at 547.907 kb on - strand at 547.907 kb on - strand at 547.907 kb on - strand at 547.907 kb on - strand at 547.907 kb on - strand at 547.907 kb on - strand at 547.907 kb on - strand at 547.907 kb on - strand at 547.924 kb on + strand at 547.924 kb on + strand at 547.924 kb on + strand at 547.924 kb on + strand at 547.925 kb on - strand at 547.925 kb on - strand at 547.925 kb on - strand at 547.925 kb on - strand at 547.925 kb on - strand at 547.994 kb on - strand, within EFB2_00543 at 548.004 kb on + strand, within EFB2_00543 at 548.004 kb on + strand, within EFB2_00543 at 548.004 kb on + strand, within EFB2_00543 at 548.004 kb on + strand, within EFB2_00543 at 548.004 kb on + strand, within EFB2_00543 at 548.004 kb on + strand, within EFB2_00543 at 548.004 kb on + strand, within EFB2_00543 at 548.004 kb on + strand, within EFB2_00543 at 548.004 kb on + strand, within EFB2_00543 at 548.004 kb on + strand, within EFB2_00543 at 548.004 kb on + strand, within EFB2_00543 at 548.004 kb on + strand, within EFB2_00543 at 548.005 kb on - strand, within EFB2_00543 at 548.029 kb on + strand, within EFB2_00543 at 548.029 kb on + strand, within EFB2_00543 at 548.029 kb on + strand, within EFB2_00543 at 548.029 kb on + strand, within EFB2_00543 at 548.029 kb on + strand, within EFB2_00543 at 548.029 kb on + strand, within EFB2_00543 at 548.029 kb on + strand, within EFB2_00543 at 548.029 kb on + strand, within EFB2_00543 at 548.029 kb on + strand, within EFB2_00543 at 548.029 kb on + strand, within EFB2_00543 at 548.029 kb on + strand, within EFB2_00543 at 548.030 kb on - strand, within EFB2_00543 at 548.030 kb on - strand, within EFB2_00543 at 548.030 kb on - strand, within EFB2_00543 at 548.030 kb on - strand, within EFB2_00543 at 548.030 kb on - strand, within EFB2_00543 at 548.030 kb on - strand, within EFB2_00543 at 548.030 kb on - strand, within EFB2_00543 at 548.030 kb on - strand, within EFB2_00543 at 548.030 kb on - strand, within EFB2_00543 at 548.030 kb on - strand, within EFB2_00543 at 548.086 kb on + strand, within EFB2_00543 at 548.086 kb on + strand, within EFB2_00543 at 548.208 kb on + strand at 548.208 kb on + strand at 548.208 kb on + strand at 548.208 kb on + strand at 548.208 kb on + strand at 548.208 kb on + strand at 548.208 kb on + strand at 548.208 kb on + strand at 548.209 kb on - strand at 548.209 kb on - strand at 548.209 kb on - strand at 548.210 kb on + strand at 548.210 kb on + strand at 548.210 kb on + strand at 548.210 kb on + strand at 548.210 kb on + strand at 548.210 kb on + strand at 548.210 kb on + strand at 548.210 kb on + strand at 548.210 kb on + strand at 548.210 kb on + strand at 548.210 kb on + strand at 548.210 kb on + strand at 548.210 kb on + strand at 548.210 kb on + strand at 548.210 kb on + strand at 548.210 kb on + strand at 548.210 kb on + strand at 548.211 kb on - strand at 548.211 kb on - strand at 548.211 kb on - strand at 548.211 kb on - strand at 548.211 kb on - strand at 548.211 kb on - strand at 548.211 kb on - strand at 548.211 kb on - strand at 548.211 kb on - strand at 548.211 kb on - strand at 548.211 kb on - strand at 548.211 kb on - strand at 548.231 kb on + strand at 548.231 kb on + strand at 548.231 kb on + strand at 548.231 kb on + strand at 548.231 kb on + strand at 548.232 kb on - strand at 548.232 kb on - strand at 548.232 kb on - strand at 548.232 kb on - strand at 548.232 kb on - strand at 548.232 kb on - strand at 548.232 kb on - strand at 548.232 kb on - strand at 548.232 kb on - strand at 548.235 kb on + strand, within EFB2_00544 at 548.235 kb on + strand, within EFB2_00544 at 548.235 kb on + strand, within EFB2_00544 at 548.236 kb on - strand, within EFB2_00544 at 548.236 kb on - strand, within EFB2_00544 at 548.236 kb on - strand, within EFB2_00544 at 548.236 kb on - strand, within EFB2_00544 at 548.236 kb on - strand, within EFB2_00544 at 548.236 kb on - strand, within EFB2_00544 at 548.236 kb on - strand, within EFB2_00544 at 548.236 kb on - strand, within EFB2_00544 at 548.236 kb on - strand, within EFB2_00544 at 548.236 kb on - strand, within EFB2_00544 at 548.236 kb on - strand, within EFB2_00544 at 548.246 kb on + strand, within EFB2_00544 at 548.246 kb on + strand, within EFB2_00544 at 548.247 kb on - strand, within EFB2_00544 at 548.251 kb on + strand, within EFB2_00544 at 548.276 kb on - strand, within EFB2_00544 at 548.276 kb on - strand, within EFB2_00544 at 548.309 kb on + strand, within EFB2_00544 at 548.309 kb on + strand, within EFB2_00544 at 548.310 kb on - strand, within EFB2_00544 at 548.310 kb on - strand, within EFB2_00544 at 548.310 kb on - strand, within EFB2_00544 at 548.310 kb on - strand, within EFB2_00544 at 548.310 kb on - strand, within EFB2_00544 at 548.310 kb on - strand, within EFB2_00544 at 548.315 kb on + strand, within EFB2_00544 at 548.315 kb on + strand, within EFB2_00544 at 548.315 kb on + strand, within EFB2_00544 at 548.315 kb on + strand, within EFB2_00544 at 548.334 kb on + strand, within EFB2_00544 at 548.334 kb on + strand, within EFB2_00544 at 548.334 kb on + strand, within EFB2_00544 at 548.335 kb on - strand, within EFB2_00544 at 548.335 kb on - strand, within EFB2_00544 at 548.352 kb on + strand, within EFB2_00544 at 548.353 kb on - strand, within EFB2_00544 at 548.380 kb on + strand, within EFB2_00544 at 548.380 kb on + strand, within EFB2_00544 at 548.380 kb on + strand, within EFB2_00544 at 548.380 kb on + strand, within EFB2_00544 at 548.380 kb on + strand, within EFB2_00544 at 548.380 kb on + strand, within EFB2_00544 at 548.380 kb on + strand, within EFB2_00544 at 548.380 kb on + strand, within EFB2_00544 at 548.380 kb on + strand, within EFB2_00544 at 548.380 kb on + strand, within EFB2_00544 at 548.381 kb on - strand, within EFB2_00544 at 548.381 kb on - strand, within EFB2_00544 at 548.381 kb on - strand, within EFB2_00544 at 548.381 kb on - strand, within EFB2_00544 at 548.381 kb on - strand, within EFB2_00544 at 548.381 kb on - strand, within EFB2_00544 at 548.381 kb on - strand, within EFB2_00544 at 548.381 kb on - strand, within EFB2_00544 at 548.381 kb on - strand, within EFB2_00544 at 548.381 kb on - strand, within EFB2_00544 at 548.381 kb on - strand, within EFB2_00544 at 548.381 kb on - strand, within EFB2_00544 at 548.383 kb on + strand, within EFB2_00544 at 548.383 kb on + strand, within EFB2_00544 at 548.383 kb on + strand, within EFB2_00544 at 548.383 kb on + strand, within EFB2_00544 at 548.384 kb on - strand, within EFB2_00544 at 548.384 kb on - strand, within EFB2_00544 at 548.384 kb on - strand, within EFB2_00544 at 548.398 kb on + strand, within EFB2_00544 at 548.398 kb on + strand, within EFB2_00544 at 548.398 kb on + strand, within EFB2_00544 at 548.491 kb on + strand, within EFB2_00544 at 548.513 kb on + strand, within EFB2_00544 at 548.513 kb on + strand, within EFB2_00544 at 548.513 kb on + strand, within EFB2_00544 at 548.513 kb on + strand, within EFB2_00544 at 548.513 kb on + strand, within EFB2_00544 at 548.514 kb on - strand, within EFB2_00544 at 548.514 kb on - strand, within EFB2_00544 at 548.514 kb on - strand, within EFB2_00544 at 548.523 kb on + strand, within EFB2_00544 at 548.523 kb on + strand, within EFB2_00544 at 548.523 kb on + strand, within EFB2_00544 at 548.524 kb on - strand, within EFB2_00544 at 548.524 kb on - strand, within EFB2_00544 at 548.524 kb on - strand, within EFB2_00544 at 548.524 kb on - strand, within EFB2_00544 at 548.541 kb on + strand, within EFB2_00544 at 548.541 kb on + strand, within EFB2_00544 at 548.541 kb on + strand, within EFB2_00544 at 548.541 kb on + strand, within EFB2_00544 at 548.541 kb on + strand, within EFB2_00544 at 548.541 kb on + strand, within EFB2_00544 at 548.541 kb on + strand, within EFB2_00544 at 548.541 kb on + strand, within EFB2_00544 at 548.541 kb on + strand, within EFB2_00544 at 548.541 kb on + strand, within EFB2_00544 at 548.541 kb on + strand, within EFB2_00544 at 548.541 kb on + strand, within EFB2_00544 at 548.541 kb on + strand, within EFB2_00544 at 548.541 kb on + strand, within EFB2_00544 at 548.541 kb on + strand, within EFB2_00544 at 548.541 kb on + strand, within EFB2_00544 at 548.541 kb on + strand, within EFB2_00544 at 548.542 kb on - strand, within EFB2_00544 at 548.542 kb on - strand, within EFB2_00544 at 548.542 kb on - strand, within EFB2_00544 at 548.542 kb on - strand, within EFB2_00544 at 548.542 kb on - strand, within EFB2_00544 at 548.542 kb on - strand, within EFB2_00544 at 548.542 kb on - strand, within EFB2_00544 at 548.542 kb on - strand, within EFB2_00544 at 548.542 kb on - strand, within EFB2_00544 at 548.542 kb on - strand, within EFB2_00544 at 548.542 kb on - strand, within EFB2_00544 at 548.542 kb on - strand, within EFB2_00544 at 548.542 kb on - strand, within EFB2_00544 at 548.542 kb on - strand, within EFB2_00544 at 548.542 kb on - strand, within EFB2_00544 at 548.542 kb on - strand, within EFB2_00544 at 548.542 kb on - strand, within EFB2_00544 at 548.542 kb on - strand, within EFB2_00544 at 548.542 kb on - strand, within EFB2_00544 at 548.542 kb on - strand, within EFB2_00544 at 548.578 kb on + strand, within EFB2_00544 at 548.578 kb on + strand, within EFB2_00544 at 548.578 kb on + strand, within EFB2_00544 at 548.578 kb on + strand, within EFB2_00544 at 548.578 kb on + strand, within EFB2_00544 at 548.578 kb on + strand, within EFB2_00544 at 548.578 kb on + strand, within EFB2_00544 at 548.579 kb on - strand, within EFB2_00544 at 548.579 kb on - strand, within EFB2_00544 at 548.579 kb on - strand, within EFB2_00544 at 548.579 kb on - strand, within EFB2_00544 at 548.579 kb on - strand, within EFB2_00544 at 548.579 kb on - strand, within EFB2_00544 at 548.579 kb on - strand, within EFB2_00544 at 548.579 kb on - strand, within EFB2_00544 at 548.579 kb on - strand, within EFB2_00544 at 548.579 kb on - strand, within EFB2_00544 at 548.582 kb on + strand, within EFB2_00544 at 548.582 kb on + strand, within EFB2_00544 at 548.582 kb on + strand, within EFB2_00544 at 548.582 kb on + strand, within EFB2_00544 at 548.582 kb on + strand, within EFB2_00544 at 548.582 kb on + strand, within EFB2_00544 at 548.582 kb on + strand, within EFB2_00544 at 548.582 kb on + strand, within EFB2_00544 at 548.582 kb on + strand, within EFB2_00544 at 548.582 kb on + strand, within EFB2_00544 at 548.582 kb on + strand, within EFB2_00544 at 548.582 kb on + strand, within EFB2_00544 at 548.582 kb on + strand, within EFB2_00544 at 548.582 kb on + strand, within EFB2_00544 at 548.582 kb on + strand, within EFB2_00544 at 548.582 kb on + strand, within EFB2_00544 at 548.582 kb on + strand, within EFB2_00544 at 548.582 kb on + strand, within EFB2_00544 at 548.582 kb on + strand, within EFB2_00544 at 548.582 kb on + strand, within EFB2_00544 at 548.582 kb on + strand, within EFB2_00544 at 548.582 kb on + strand, within EFB2_00544 at 548.582 kb on + strand, within EFB2_00544 at 548.582 kb on + strand, within EFB2_00544 at 548.582 kb on + strand, within EFB2_00544 at 548.582 kb on + strand, within EFB2_00544 at 548.582 kb on + strand, within EFB2_00544 at 548.582 kb on + strand, within EFB2_00544 at 548.582 kb on + strand, within EFB2_00544 at 548.582 kb on + strand, within EFB2_00544 at 548.582 kb on + strand, within EFB2_00544 at 548.582 kb on + strand, within EFB2_00544 at 548.582 kb on + strand, within EFB2_00544 at 548.582 kb on + strand, within EFB2_00544 at 548.582 kb on + strand, within EFB2_00544 at 548.582 kb on + strand, within EFB2_00544 at 548.582 kb on + strand, within EFB2_00544 at 548.582 kb on + strand, within EFB2_00544 at 548.582 kb on + strand, within EFB2_00544 at 548.582 kb on + strand, within EFB2_00544 at 548.582 kb on + strand, within EFB2_00544 at 548.582 kb on + strand, within EFB2_00544 at 548.582 kb on + strand, within EFB2_00544 at 548.583 kb on - strand, within EFB2_00544 at 548.583 kb on - strand, within EFB2_00544 at 548.583 kb on - strand, within EFB2_00544 at 548.583 kb on - strand, within EFB2_00544 at 548.583 kb on - strand, within EFB2_00544 at 548.583 kb on - strand, within EFB2_00544 at 548.583 kb on - strand, within EFB2_00544 at 548.583 kb on - strand, within EFB2_00544 at 548.583 kb on - strand, within EFB2_00544 at 548.583 kb on - strand, within EFB2_00544 at 548.583 kb on - strand, within EFB2_00544 at 548.583 kb on - strand, within EFB2_00544 at 548.583 kb on - strand, within EFB2_00544 at 548.583 kb on - strand, within EFB2_00544 at 548.583 kb on - strand, within EFB2_00544 at 548.583 kb on - strand, within EFB2_00544 at 548.583 kb on - strand, within EFB2_00544 at 548.583 kb on - strand, within EFB2_00544 at 548.583 kb on - strand, within EFB2_00544 at 548.583 kb on - strand, within EFB2_00544 at 548.583 kb on - strand, within EFB2_00544 at 548.583 kb on - strand, within EFB2_00544 at 548.583 kb on - strand, within EFB2_00544 at 548.583 kb on - strand, within EFB2_00544 at 548.583 kb on - strand, within EFB2_00544 at 548.583 kb on - strand, within EFB2_00544 at 548.583 kb on - strand, within EFB2_00544 at 548.583 kb on - strand, within EFB2_00544 at 548.583 kb on - strand, within EFB2_00544 at 548.583 kb on - strand, within EFB2_00544 at 548.583 kb on - strand, within EFB2_00544 at 548.583 kb on - strand, within EFB2_00544 at 548.583 kb on - strand, within EFB2_00544 at 548.583 kb on - strand, within EFB2_00544 at 548.583 kb on - strand, within EFB2_00544 at 548.583 kb on - strand, within EFB2_00544 at 548.583 kb on - strand, within EFB2_00544 at 548.583 kb on - strand, within EFB2_00544 at 548.583 kb on - strand, within EFB2_00544 at 548.583 kb on - strand, within EFB2_00544 at 548.583 kb on - strand, within EFB2_00544 at 548.587 kb on + strand, within EFB2_00544 at 548.587 kb on + strand, within EFB2_00544 at 548.587 kb on + strand, within EFB2_00544 at 548.587 kb on + strand, within EFB2_00544 at 548.587 kb on + strand, within EFB2_00544 at 548.587 kb on + strand, within EFB2_00544 at 548.587 kb on + strand, within EFB2_00544 at 548.587 kb on + strand, within EFB2_00544 at 548.587 kb on + strand, within EFB2_00544 at 548.587 kb on + strand, within EFB2_00544 at 548.587 kb on + strand, within EFB2_00544 at 548.587 kb on + strand, within EFB2_00544 at 548.587 kb on + strand, within EFB2_00544 at 548.587 kb on + strand, within EFB2_00544 at 548.587 kb on + strand, within EFB2_00544 at 548.587 kb on + strand, within EFB2_00544 at 548.587 kb on + strand, within EFB2_00544 at 548.587 kb on + strand, within EFB2_00544 at 548.587 kb on + strand, within EFB2_00544 at 548.587 kb on + strand, within EFB2_00544 at 548.587 kb on + strand, within EFB2_00544 at 548.587 kb on + strand, within EFB2_00544 at 548.587 kb on + strand, within EFB2_00544 at 548.587 kb on + strand, within EFB2_00544 at 548.587 kb on + strand, within EFB2_00544 at 548.587 kb on + strand, within EFB2_00544 at 548.587 kb on + strand, within EFB2_00544 at 548.587 kb on + strand, within EFB2_00544 at 548.587 kb on + strand, within EFB2_00544 at 548.587 kb on + strand, within EFB2_00544 at 548.587 kb on + strand, within EFB2_00544 at 548.587 kb on + strand, within EFB2_00544 at 548.587 kb on + strand, within EFB2_00544 at 548.588 kb on - strand, within EFB2_00544 at 548.588 kb on - strand, within EFB2_00544 at 548.588 kb on - strand, within EFB2_00544 at 548.588 kb on - strand, within EFB2_00544 at 548.588 kb on - strand, within EFB2_00544 at 548.588 kb on - strand, within EFB2_00544 at 548.588 kb on - strand, within EFB2_00544 at 548.588 kb on - strand, within EFB2_00544 at 548.588 kb on - strand, within EFB2_00544 at 548.588 kb on - strand, within EFB2_00544 at 548.588 kb on - strand, within EFB2_00544 at 548.588 kb on - strand, within EFB2_00544 at 548.588 kb on - strand, within EFB2_00544 at 548.588 kb on - strand, within EFB2_00544 at 548.588 kb on - strand, within EFB2_00544 at 548.588 kb on - strand, within EFB2_00544 at 548.588 kb on - strand, within EFB2_00544 at 548.588 kb on - strand, within EFB2_00544 at 548.588 kb on - strand, within EFB2_00544 at 548.588 kb on - strand, within EFB2_00544 at 548.588 kb on - strand, within EFB2_00544 at 548.588 kb on - strand, within EFB2_00544 at 548.588 kb on - strand, within EFB2_00544 at 548.588 kb on - strand, within EFB2_00544 at 548.588 kb on - strand, within EFB2_00544 at 548.588 kb on - strand, within EFB2_00544 at 548.588 kb on - strand, within EFB2_00544 at 548.588 kb on - strand, within EFB2_00544 at 548.588 kb on - strand, within EFB2_00544 at 548.588 kb on - strand, within EFB2_00544 at 548.588 kb on - strand, within EFB2_00544 at 548.588 kb on - strand, within EFB2_00544 at 548.588 kb on - strand, within EFB2_00544 at 548.588 kb on - strand, within EFB2_00544 at 548.588 kb on - strand, within EFB2_00544 at 548.588 kb on - strand, within EFB2_00544 at 548.664 kb on + strand, within EFB2_00544 at 548.677 kb on + strand, within EFB2_00544 at 548.678 kb on - strand at 548.678 kb on - strand at 548.719 kb on + strand at 548.719 kb on + strand at 548.720 kb on - strand at 548.733 kb on + strand at 548.733 kb on + strand at 548.733 kb on + strand at 548.733 kb on + strand at 548.733 kb on + strand at 548.733 kb on + strand at 548.733 kb on + strand at 548.733 kb on + strand at 548.733 kb on + strand at 548.733 kb on + strand at 548.733 kb on + strand at 548.733 kb on + strand at 548.733 kb on + strand at 548.733 kb on + strand at 548.733 kb on + strand at 548.733 kb on + strand at 548.733 kb on + strand at 548.733 kb on + strand at 548.733 kb on + strand at 548.734 kb on - strand at 548.734 kb on - strand at 548.734 kb on - strand at 548.734 kb on - strand at 548.734 kb on - strand at 548.734 kb on - strand at 548.734 kb on - strand at 548.734 kb on - strand at 548.734 kb on - strand at 548.734 kb on - strand at 548.734 kb on - strand at 548.734 kb on - strand at 548.734 kb on - strand at 548.734 kb on - strand at 548.734 kb on - strand at 548.734 kb on - strand at 548.734 kb on - strand at 548.734 kb on - strand at 548.734 kb on - strand at 548.734 kb on - strand at 548.734 kb on - strand at 548.748 kb on + strand at 548.748 kb on + strand at 548.748 kb on + strand at 548.749 kb on - strand at 548.749 kb on - strand at 548.749 kb on - strand at 548.749 kb on - strand at 548.757 kb on + strand at 548.758 kb on - strand at 548.758 kb on - strand at 548.758 kb on - strand at 548.758 kb on - strand at 548.758 kb on - strand at 548.758 kb on - strand at 548.758 kb on - strand at 548.761 kb on - strand at 548.774 kb on - strand at 548.774 kb on - strand at 548.778 kb on + strand at 548.778 kb on + strand at 548.778 kb on + strand at 548.778 kb on + strand at 548.778 kb on + strand at 548.778 kb on + strand at 548.778 kb on + strand at 548.778 kb on + strand at 548.778 kb on + strand at 548.779 kb on - strand at 548.779 kb on - strand at 548.779 kb on - strand at 548.779 kb on - strand at 548.779 kb on - strand at 548.779 kb on - strand at 548.779 kb on - strand at 548.779 kb on - strand at 548.800 kb on + strand at 548.800 kb on + strand at 548.800 kb on + strand at 548.800 kb on + strand at 548.800 kb on + strand at 548.800 kb on + strand at 548.800 kb on + strand at 548.801 kb on - strand at 548.801 kb on - strand at 548.801 kb on - strand at 548.801 kb on - strand at 548.801 kb on - strand at 548.801 kb on - strand at 548.801 kb on - strand at 548.801 kb on - strand at 548.801 kb on - strand at 548.801 kb on - strand at 548.804 kb on - strand at 548.883 kb on + strand at 548.883 kb on + strand at 548.883 kb on + strand at 548.884 kb on - strand at 548.884 kb on - strand at 548.908 kb on + strand at 548.908 kb on + strand at 548.908 kb on + strand at 548.908 kb on + strand at 548.908 kb on + strand at 548.908 kb on + strand at 548.909 kb on - strand at 548.909 kb on - strand at 548.909 kb on - strand at 548.909 kb on - strand at 548.909 kb on - strand at 548.909 kb on - strand at 548.909 kb on - strand at 548.909 kb on - strand at 548.909 kb on - strand at 548.909 kb on - strand at 548.910 kb on + strand at 548.910 kb on + strand at 548.910 kb on + strand at 548.910 kb on + strand at 548.911 kb on - strand at 548.911 kb on - strand at 548.911 kb on - strand at 548.911 kb on - strand at 548.954 kb on + strand at 548.954 kb on + strand at 548.960 kb on + strand at 548.960 kb on + strand at 548.960 kb on + strand at 548.960 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) remove 547,124 + +0.2 547,124 + +2.1 547,129 + +1.1 547,129 + -2.2 547,129 + -1.3 547,129 + -2.4 547,129 + +0.4 547,129 + +0.4 547,130 - -1.7 547,130 - -0.9 547,130 - -0.3 547,130 - -0.6 547,130 - +0.5 547,130 - -1.5 547,130 - +2.4 547,130 - -0.5 547,130 - +1.4 547,130 - -0.4 547,130 - -1.1 547,140 + -0.1 547,140 + -3.3 547,140 + +1.1 547,140 + +0.0 547,140 + +1.8 547,140 + -1.5 547,140 + -1.0 547,140 + -1.0 547,140 + -2.4 547,140 + +0.6 547,140 + +1.3 547,140 + -1.4 547,140 + +0.8 547,140 + +0.3 547,140 + -1.7 547,140 + -1.0 547,140 + -1.6 547,141 - +0.1 547,141 - -0.8 547,141 - -0.6 547,141 - -0.2 547,141 - -0.4 547,141 - -1.9 547,141 - +0.7 547,141 - -0.6 547,141 - -0.4 547,214 + EFB2_00542 0.10 +0.4 547,214 + EFB2_00542 0.10 -0.8 547,215 - EFB2_00542 0.10 -0.7 547,215 - EFB2_00542 0.10 +0.8 547,215 - EFB2_00542 0.10 -0.9 547,227 + EFB2_00542 0.12 +1.3 547,227 + EFB2_00542 0.12 +2.3 547,228 - EFB2_00542 0.12 +1.8 547,283 + EFB2_00542 0.19 -1.1 547,284 - EFB2_00542 0.19 +0.4 547,295 + EFB2_00542 0.20 +0.2 547,296 - EFB2_00542 0.20 -0.2 547,322 + EFB2_00542 0.23 +1.3 547,322 + EFB2_00542 0.23 +1.4 547,323 - EFB2_00542 0.23 -1.1 547,355 + EFB2_00542 0.27 -1.0 547,355 + EFB2_00542 0.27 -1.5 547,385 + EFB2_00542 0.31 -1.8 547,385 + EFB2_00542 0.31 +2.4 547,385 + EFB2_00542 0.31 -1.9 547,385 + EFB2_00542 0.31 +1.0 547,385 + EFB2_00542 0.31 -3.1 547,386 - EFB2_00542 0.31 -0.6 547,386 - EFB2_00542 0.31 -2.3 547,386 - EFB2_00542 0.31 +1.0 547,403 - EFB2_00542 0.33 +0.2 547,403 - EFB2_00542 0.33 +0.7 547,439 + EFB2_00542 0.38 +1.0 547,439 + EFB2_00542 0.38 -1.6 547,439 + EFB2_00542 0.38 +1.8 547,439 + EFB2_00542 0.38 -0.8 547,439 + EFB2_00542 0.38 -0.2 547,439 + EFB2_00542 0.38 -3.3 547,439 + EFB2_00542 0.38 -0.1 547,440 - EFB2_00542 0.38 +0.3 547,440 - EFB2_00542 0.38 -1.5 547,440 - EFB2_00542 0.38 -0.5 547,440 - EFB2_00542 0.38 -0.8 547,441 + EFB2_00542 0.38 -1.9 547,441 + EFB2_00542 0.38 -0.5 547,441 + EFB2_00542 0.38 +0.5 547,441 + EFB2_00542 0.38 +0.5 547,441 + EFB2_00542 0.38 -2.6 547,441 + EFB2_00542 0.38 -2.0 547,441 + EFB2_00542 0.38 -0.6 547,441 + EFB2_00542 0.38 -1.8 547,441 + EFB2_00542 0.38 +0.2 547,441 + EFB2_00542 0.38 -0.2 547,441 + EFB2_00542 0.38 -1.4 547,441 + EFB2_00542 0.38 -1.6 547,442 - EFB2_00542 0.38 -1.8 547,442 - EFB2_00542 0.38 -1.4 547,442 - EFB2_00542 0.38 -2.0 547,442 - EFB2_00542 0.38 -1.3 547,442 - EFB2_00542 0.38 +0.6 547,442 - EFB2_00542 0.38 -2.3 547,442 - EFB2_00542 0.38 -2.8 547,442 - EFB2_00542 0.38 -2.2 547,442 - EFB2_00542 0.38 -1.9 547,442 - EFB2_00542 0.38 +3.6 547,442 - EFB2_00542 0.38 -2.4 547,442 - EFB2_00542 0.38 +0.2 547,442 - EFB2_00542 0.38 -0.9 547,442 - EFB2_00542 0.38 -0.0 547,442 - EFB2_00542 0.38 -1.5 547,442 - EFB2_00542 0.38 +0.9 547,451 - EFB2_00542 0.39 +0.2 547,451 - EFB2_00542 0.39 +2.1 547,489 + EFB2_00542 0.44 -0.4 547,489 + EFB2_00542 0.44 -0.9 547,489 + EFB2_00542 0.44 -0.4 547,493 + EFB2_00542 0.44 +1.8 547,493 + EFB2_00542 0.44 -1.0 547,494 - EFB2_00542 0.44 +2.3 547,531 + EFB2_00542 0.49 +0.1 547,531 + EFB2_00542 0.49 -1.7 547,531 + EFB2_00542 0.49 +0.2 547,531 + EFB2_00542 0.49 -0.7 547,531 + EFB2_00542 0.49 +0.2 547,532 - EFB2_00542 0.49 -1.6 547,532 - EFB2_00542 0.49 +0.2 547,532 - EFB2_00542 0.49 -1.6 547,532 - EFB2_00542 0.49 -2.0 547,534 + EFB2_00542 0.49 -2.1 547,534 + EFB2_00542 0.49 -0.0 547,534 + EFB2_00542 0.49 -0.7 547,534 + EFB2_00542 0.49 -2.4 547,534 + EFB2_00542 0.49 -0.1 547,535 - EFB2_00542 0.49 +1.4 547,535 - EFB2_00542 0.49 -0.2 547,535 - EFB2_00542 0.49 -0.7 547,535 - EFB2_00542 0.49 -0.2 547,535 - EFB2_00542 0.49 -1.1 547,535 - EFB2_00542 0.49 +1.8 547,607 + EFB2_00542 0.58 -2.0 547,607 + EFB2_00542 0.58 -0.4 547,608 - EFB2_00542 0.58 -0.9 547,608 - EFB2_00542 0.58 -1.4 547,631 + EFB2_00542 0.61 -0.0 547,632 - EFB2_00542 0.61 -1.1 547,682 + EFB2_00542 0.67 +0.4 547,682 + EFB2_00542 0.67 +0.5 547,683 - EFB2_00542 0.67 -1.8 547,683 - EFB2_00542 0.67 +1.4 547,683 - EFB2_00542 0.67 +1.5 547,685 + EFB2_00542 0.68 +1.9 547,685 + EFB2_00542 0.68 -2.2 547,686 - EFB2_00542 0.68 +1.5 547,686 - EFB2_00542 0.68 -1.4 547,715 + EFB2_00542 0.71 -0.7 547,715 + EFB2_00542 0.71 -2.1 547,715 + EFB2_00542 0.71 +0.2 547,755 + EFB2_00542 0.76 -2.7 547,755 + EFB2_00542 0.76 -2.0 547,755 + EFB2_00542 0.76 +0.6 547,755 + EFB2_00542 0.76 +0.4 547,755 + EFB2_00542 0.76 -1.8 547,755 + EFB2_00542 0.76 +1.0 547,755 + EFB2_00542 0.76 +0.5 547,755 + EFB2_00542 0.76 -0.2 547,755 + EFB2_00542 0.76 +0.6 547,755 + EFB2_00542 0.76 -1.2 547,756 - EFB2_00542 0.76 -2.1 547,756 - EFB2_00542 0.76 -1.6 547,756 - EFB2_00542 0.76 +0.8 547,756 - EFB2_00542 0.76 -1.0 547,756 - EFB2_00542 0.76 -0.9 547,756 - EFB2_00542 0.76 -0.4 547,756 - EFB2_00542 0.76 +1.6 547,756 - EFB2_00542 0.76 -0.2 547,756 - EFB2_00542 0.76 -2.5 547,756 - EFB2_00542 0.76 -1.6 547,756 - EFB2_00542 0.76 -1.3 547,756 - EFB2_00542 0.76 +0.4 547,761 + EFB2_00542 0.77 -0.9 547,762 - EFB2_00542 0.77 +1.4 547,762 - EFB2_00542 0.77 +0.8 547,762 - EFB2_00542 0.77 -0.9 547,762 - EFB2_00542 0.77 -0.1 547,773 + EFB2_00542 0.78 +1.4 547,773 + EFB2_00542 0.78 +1.8 547,774 - EFB2_00542 0.79 +0.4 547,774 - EFB2_00542 0.79 +0.6 547,774 - EFB2_00542 0.79 -0.9 547,774 - EFB2_00542 0.79 -0.0 547,829 + EFB2_00542 0.85 +1.3 547,829 + EFB2_00542 0.85 +0.2 547,829 + EFB2_00542 0.85 -2.4 547,829 + EFB2_00542 0.85 -1.1 547,829 + EFB2_00542 0.85 -1.6 547,830 - EFB2_00542 0.85 +2.5 547,830 - EFB2_00542 0.85 -2.2 547,830 - EFB2_00542 0.85 +0.8 547,830 - EFB2_00542 0.85 +0.4 547,830 - EFB2_00542 0.85 +0.2 547,843 + EFB2_00542 0.87 -1.6 547,844 - EFB2_00542 0.87 -0.2 547,906 + -0.4 547,906 + -0.2 547,906 + -0.7 547,906 + -0.3 547,906 + +1.2 547,906 + -0.6 547,906 + +1.3 547,906 + -2.8 547,906 + -0.6 547,906 + -1.3 547,906 + -1.7 547,907 - -1.6 547,907 - -0.7 547,907 - +3.0 547,907 - +2.2 547,907 - -0.7 547,907 - +1.6 547,907 - +1.0 547,907 - -1.1 547,907 - -0.1 547,924 + +1.3 547,924 + -0.5 547,924 + +1.3 547,924 + -0.7 547,925 - -0.8 547,925 - +1.1 547,925 - +1.9 547,925 - +1.4 547,925 - -1.6 547,994 - EFB2_00543 0.19 +1.1 548,004 + EFB2_00543 0.22 -0.0 548,004 + EFB2_00543 0.22 -1.8 548,004 + EFB2_00543 0.22 -3.2 548,004 + EFB2_00543 0.22 -1.1 548,004 + EFB2_00543 0.22 -2.4 548,004 + EFB2_00543 0.22 +0.7 548,004 + EFB2_00543 0.22 -0.7 548,004 + EFB2_00543 0.22 -1.8 548,004 + EFB2_00543 0.22 -1.4 548,004 + EFB2_00543 0.22 +3.1 548,004 + EFB2_00543 0.22 -0.9 548,004 + EFB2_00543 0.22 -0.1 548,005 - EFB2_00543 0.23 -0.9 548,029 + EFB2_00543 0.32 +0.3 548,029 + EFB2_00543 0.32 -2.8 548,029 + EFB2_00543 0.32 -0.4 548,029 + EFB2_00543 0.32 +1.0 548,029 + EFB2_00543 0.32 -0.9 548,029 + EFB2_00543 0.32 -1.5 548,029 + EFB2_00543 0.32 +1.8 548,029 + EFB2_00543 0.32 +0.4 548,029 + EFB2_00543 0.32 +0.1 548,029 + EFB2_00543 0.32 +1.5 548,029 + EFB2_00543 0.32 +0.2 548,030 - EFB2_00543 0.33 +0.6 548,030 - EFB2_00543 0.33 -0.2 548,030 - EFB2_00543 0.33 -1.3 548,030 - EFB2_00543 0.33 +1.0 548,030 - EFB2_00543 0.33 -0.1 548,030 - EFB2_00543 0.33 -0.9 548,030 - EFB2_00543 0.33 +0.5 548,030 - EFB2_00543 0.33 +1.0 548,030 - EFB2_00543 0.33 +0.8 548,030 - EFB2_00543 0.33 +2.3 548,086 + EFB2_00543 0.54 +0.1 548,086 + EFB2_00543 0.54 -0.8 548,208 + +1.2 548,208 + -3.3 548,208 + +1.1 548,208 + -3.4 548,208 + +0.3 548,208 + +1.7 548,208 + -0.6 548,208 + +0.3 548,209 - +0.0 548,209 - -0.2 548,209 - -2.1 548,210 + +0.6 548,210 + +0.7 548,210 + +0.4 548,210 + -0.1 548,210 + +1.4 548,210 + -0.6 548,210 + +1.2 548,210 + -1.8 548,210 + +0.6 548,210 + +0.6 548,210 + -0.5 548,210 + +0.7 548,210 + +0.4 548,210 + -1.0 548,210 + -0.8 548,210 + -0.7 548,210 + -0.6 548,211 - -2.0 548,211 - +0.2 548,211 - -1.5 548,211 - +1.2 548,211 - +0.5 548,211 - +0.1 548,211 - -2.5 548,211 - +0.2 548,211 - -0.9 548,211 - -3.1 548,211 - -0.4 548,211 - +1.3 548,231 + +0.6 548,231 + -0.8 548,231 + +0.6 548,231 + +1.1 548,231 + -0.4 548,232 - 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Or see this region's nucleotide sequence