Experiment: phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EFB2_00348 and EFB2_00349 are separated by 140 nucleotides EFB2_00349 and EFB2_00350 are separated by 2 nucleotides EFB2_00350 and EFB2_00351 overlap by 11 nucleotides EFB2_00351 and EFB2_00352 are separated by 149 nucleotides
EFB2_00348: EFB2_00348 - hypothetical protein, at 363,650 to 364,276
_00348
EFB2_00349: EFB2_00349 - hypothetical protein, at 364,417 to 364,776
_00349
EFB2_00350: EFB2_00350 - hypothetical protein, at 364,779 to 365,048
_00350
EFB2_00351: EFB2_00351 - Ribosomal RNA small subunit methyltransferase D, at 365,038 to 365,634
_00351
EFB2_00352: EFB2_00352 - Signal recognition particle receptor FtsY, at 365,784 to 367,280
_00352
Position (kb) 364
365
366 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 363.872 kb on - strand, within EFB2_00348 at 363.883 kb on + strand, within EFB2_00348 at 363.883 kb on + strand, within EFB2_00348 at 363.883 kb on + strand, within EFB2_00348 at 363.883 kb on + strand, within EFB2_00348 at 363.883 kb on + strand, within EFB2_00348 at 363.883 kb on + strand, within EFB2_00348 at 363.883 kb on + strand, within EFB2_00348 at 363.883 kb on + strand, within EFB2_00348 at 363.884 kb on - strand, within EFB2_00348 at 363.884 kb on - strand, within EFB2_00348 at 363.884 kb on - strand, within EFB2_00348 at 363.884 kb on - strand, within EFB2_00348 at 363.894 kb on + strand, within EFB2_00348 at 363.894 kb on + strand, within EFB2_00348 at 363.894 kb on + strand, within EFB2_00348 at 363.894 kb on + strand, within EFB2_00348 at 363.895 kb on - strand, within EFB2_00348 at 363.895 kb on - strand, within EFB2_00348 at 363.895 kb on - strand, within EFB2_00348 at 363.916 kb on + strand, within EFB2_00348 at 363.916 kb on + strand, within EFB2_00348 at 363.926 kb on + strand, within EFB2_00348 at 363.926 kb on + strand, within EFB2_00348 at 363.999 kb on + strand, within EFB2_00348 at 363.999 kb on + strand, within EFB2_00348 at 363.999 kb on + strand, within EFB2_00348 at 363.999 kb on + strand, within EFB2_00348 at 363.999 kb on + strand, within EFB2_00348 at 363.999 kb on + strand, within EFB2_00348 at 363.999 kb on + strand, within EFB2_00348 at 363.999 kb on + strand, within EFB2_00348 at 364.000 kb on - strand, within EFB2_00348 at 364.000 kb on - strand, within EFB2_00348 at 364.000 kb on - strand, within EFB2_00348 at 364.000 kb on - strand, within EFB2_00348 at 364.000 kb on - strand, within EFB2_00348 at 364.000 kb on - strand, within EFB2_00348 at 364.000 kb on - strand, within EFB2_00348 at 364.000 kb on - strand, within EFB2_00348 at 364.000 kb on - strand, within EFB2_00348 at 364.008 kb on + strand, within EFB2_00348 at 364.008 kb on + strand, within EFB2_00348 at 364.008 kb on + strand, within EFB2_00348 at 364.008 kb on + strand, within EFB2_00348 at 364.008 kb on + strand, within EFB2_00348 at 364.008 kb on + strand, within EFB2_00348 at 364.008 kb on + strand, within EFB2_00348 at 364.008 kb on + strand, within EFB2_00348 at 364.008 kb on + strand, within EFB2_00348 at 364.008 kb on + strand, within EFB2_00348 at 364.008 kb on + strand, within EFB2_00348 at 364.008 kb on + strand, within EFB2_00348 at 364.008 kb on + strand, within EFB2_00348 at 364.008 kb on + strand, within EFB2_00348 at 364.009 kb on - strand, within EFB2_00348 at 364.009 kb on - strand, within EFB2_00348 at 364.009 kb on - strand, within EFB2_00348 at 364.009 kb on - strand, within EFB2_00348 at 364.009 kb on - strand, within EFB2_00348 at 364.009 kb on - strand, within EFB2_00348 at 364.009 kb on - strand, within EFB2_00348 at 364.009 kb on - strand, within EFB2_00348 at 364.009 kb on - strand, within EFB2_00348 at 364.009 kb on - strand, within EFB2_00348 at 364.009 kb on - strand, within EFB2_00348 at 364.009 kb on - strand, within EFB2_00348 at 364.044 kb on + strand, within EFB2_00348 at 364.044 kb on + strand, within EFB2_00348 at 364.044 kb on + strand, within EFB2_00348 at 364.044 kb on + strand, within EFB2_00348 at 364.044 kb on + strand, within EFB2_00348 at 364.044 kb on + strand, within EFB2_00348 at 364.045 kb on - strand, within EFB2_00348 at 364.045 kb on - strand, within EFB2_00348 at 364.045 kb on - strand, within EFB2_00348 at 364.045 kb on - strand, within EFB2_00348 at 364.045 kb on - strand, within EFB2_00348 at 364.045 kb on - strand, within EFB2_00348 at 364.045 kb on - strand, within EFB2_00348 at 364.045 kb on - strand, within EFB2_00348 at 364.119 kb on + strand, within EFB2_00348 at 364.119 kb on + strand, within EFB2_00348 at 364.119 kb on + strand, within EFB2_00348 at 364.119 kb on + strand, within EFB2_00348 at 364.119 kb on + strand, within EFB2_00348 at 364.119 kb on + strand, within EFB2_00348 at 364.119 kb on + strand, within EFB2_00348 at 364.120 kb on - strand, within EFB2_00348 at 364.120 kb on - strand, within EFB2_00348 at 364.120 kb on - strand, within EFB2_00348 at 364.120 kb on - strand, within EFB2_00348 at 364.120 kb on - strand, within EFB2_00348 at 364.120 kb on - strand, within EFB2_00348 at 364.120 kb on - strand, within EFB2_00348 at 364.120 kb on - strand, within EFB2_00348 at 364.123 kb on + strand, within EFB2_00348 at 364.123 kb on + strand, within EFB2_00348 at 364.123 kb on + strand, within EFB2_00348 at 364.123 kb on + strand, within EFB2_00348 at 364.123 kb on + strand, within EFB2_00348 at 364.123 kb on + strand, within EFB2_00348 at 364.123 kb on + strand, within EFB2_00348 at 364.123 kb on + strand, within EFB2_00348 at 364.123 kb on + strand, within EFB2_00348 at 364.123 kb on + strand, within EFB2_00348 at 364.123 kb on + strand, within EFB2_00348 at 364.123 kb on + strand, within EFB2_00348 at 364.123 kb on + strand, within EFB2_00348 at 364.123 kb on + strand, within EFB2_00348 at 364.124 kb on - strand, within EFB2_00348 at 364.124 kb on - strand, within EFB2_00348 at 364.124 kb on - strand, within EFB2_00348 at 364.124 kb on - strand, within EFB2_00348 at 364.124 kb on - strand, within EFB2_00348 at 364.124 kb on - strand, within EFB2_00348 at 364.124 kb on - strand, within EFB2_00348 at 364.124 kb on - strand, within EFB2_00348 at 364.124 kb on - strand, within EFB2_00348 at 364.124 kb on - strand, within EFB2_00348 at 364.124 kb on - strand, within EFB2_00348 at 364.186 kb on + strand, within EFB2_00348 at 364.186 kb on + strand, within EFB2_00348 at 364.186 kb on + strand, within EFB2_00348 at 364.186 kb on + strand, within EFB2_00348 at 364.218 kb on + strand at 364.218 kb on + strand at 364.235 kb on + strand at 364.235 kb on + strand at 364.235 kb on + strand at 364.235 kb on + strand at 364.235 kb on + strand at 364.236 kb on - strand at 364.236 kb on - strand at 364.236 kb on - strand at 364.236 kb on - strand at 364.236 kb on - strand at 364.236 kb on - strand at 364.279 kb on + strand at 364.279 kb on + strand at 364.279 kb on + strand at 364.279 kb on + strand at 364.279 kb on + strand at 364.280 kb on - strand at 364.280 kb on - strand at 364.280 kb on - strand at 364.280 kb on - strand at 364.280 kb on - strand at 364.280 kb on - strand at 364.280 kb on - strand at 364.280 kb on - strand at 364.280 kb on - strand at 364.280 kb on - strand at 364.319 kb on + strand at 364.320 kb on - strand at 364.320 kb on - strand at 364.369 kb on + strand at 364.369 kb on + strand at 364.369 kb on + strand at 364.369 kb on + strand at 364.369 kb on + strand at 364.370 kb on - strand at 364.370 kb on - strand at 364.370 kb on - strand at 364.370 kb on - strand at 364.370 kb on - strand at 364.381 kb on + strand at 364.382 kb on - strand at 364.382 kb on - strand at 364.382 kb on - strand at 364.388 kb on - strand at 364.388 kb on - strand at 364.388 kb on - strand at 364.446 kb on + strand at 364.512 kb on + strand, within EFB2_00349 at 364.512 kb on + strand, within EFB2_00349 at 364.513 kb on - strand, within EFB2_00349 at 364.575 kb on + strand, within EFB2_00349 at 364.576 kb on - strand, within EFB2_00349 at 364.620 kb on + strand, within EFB2_00349 at 364.620 kb on + strand, within EFB2_00349 at 364.620 kb on + strand, within EFB2_00349 at 364.620 kb on + strand, within EFB2_00349 at 364.620 kb on + strand, within EFB2_00349 at 364.620 kb on + strand, within EFB2_00349 at 364.620 kb on + strand, within EFB2_00349 at 364.620 kb on + strand, within EFB2_00349 at 364.620 kb on + strand, within EFB2_00349 at 364.620 kb on + strand, within EFB2_00349 at 364.620 kb on + strand, within EFB2_00349 at 364.620 kb on + strand, within EFB2_00349 at 364.620 kb on + strand, within EFB2_00349 at 364.620 kb on + strand, within EFB2_00349 at 364.620 kb on + strand, within EFB2_00349 at 364.620 kb on + strand, within EFB2_00349 at 364.620 kb on + strand, within EFB2_00349 at 364.620 kb on + strand, within EFB2_00349 at 364.620 kb on + strand, within EFB2_00349 at 364.620 kb on + strand, within EFB2_00349 at 364.620 kb on + strand, within EFB2_00349 at 364.620 kb on + strand, within EFB2_00349 at 364.620 kb on + strand, within EFB2_00349 at 364.620 kb on + strand, within EFB2_00349 at 364.620 kb on + strand, within EFB2_00349 at 364.620 kb on + strand, within EFB2_00349 at 364.620 kb on + strand, within EFB2_00349 at 364.620 kb on + strand, within EFB2_00349 at 364.620 kb on + strand, within EFB2_00349 at 364.620 kb on + strand, within EFB2_00349 at 364.620 kb on + strand, within EFB2_00349 at 364.621 kb on - strand, within EFB2_00349 at 364.621 kb on - strand, within EFB2_00349 at 364.621 kb on - strand, within EFB2_00349 at 364.621 kb on - strand, within EFB2_00349 at 364.621 kb on - strand, within EFB2_00349 at 364.621 kb on - strand, within EFB2_00349 at 364.621 kb on - strand, within EFB2_00349 at 364.621 kb on - strand, within EFB2_00349 at 364.621 kb on - strand, within EFB2_00349 at 364.621 kb on - strand, within EFB2_00349 at 364.621 kb on - strand, within EFB2_00349 at 364.621 kb on - strand, within EFB2_00349 at 364.621 kb on - strand, within EFB2_00349 at 364.621 kb on - strand, within EFB2_00349 at 364.621 kb on - strand, within EFB2_00349 at 364.621 kb on - strand, within EFB2_00349 at 364.621 kb on - strand, within EFB2_00349 at 364.621 kb on - strand, within EFB2_00349 at 364.621 kb on - strand, within EFB2_00349 at 364.621 kb on - strand, within EFB2_00349 at 364.621 kb on - strand, within EFB2_00349 at 364.621 kb on - strand, within EFB2_00349 at 364.621 kb on - strand, within EFB2_00349 at 364.623 kb on + strand, within EFB2_00349 at 364.623 kb on + strand, within EFB2_00349 at 364.623 kb on + strand, within EFB2_00349 at 364.623 kb on + strand, within EFB2_00349 at 364.623 kb on + strand, within EFB2_00349 at 364.623 kb on + strand, within EFB2_00349 at 364.623 kb on + strand, within EFB2_00349 at 364.623 kb on + strand, within EFB2_00349 at 364.623 kb on + strand, within EFB2_00349 at 364.623 kb on + strand, within EFB2_00349 at 364.623 kb on + strand, within EFB2_00349 at 364.623 kb on + strand, within EFB2_00349 at 364.623 kb on + strand, within EFB2_00349 at 364.623 kb on + strand, within EFB2_00349 at 364.623 kb on + strand, within EFB2_00349 at 364.624 kb on - strand, within EFB2_00349 at 364.624 kb on - strand, within EFB2_00349 at 364.624 kb on - strand, within EFB2_00349 at 364.624 kb on - strand, within EFB2_00349 at 364.624 kb on - strand, within EFB2_00349 at 364.624 kb on - strand, within EFB2_00349 at 364.624 kb on - strand, within EFB2_00349 at 364.624 kb on - strand, within EFB2_00349 at 364.624 kb on - strand, within EFB2_00349 at 364.624 kb on - strand, within EFB2_00349 at 364.624 kb on - strand, within EFB2_00349 at 364.624 kb on - strand, within EFB2_00349 at 364.624 kb on - strand, within EFB2_00349 at 364.631 kb on - strand, within EFB2_00349 at 364.696 kb on + strand, within EFB2_00349 at 364.696 kb on + strand, within EFB2_00349 at 364.697 kb on - strand, within EFB2_00349 at 364.697 kb on - strand, within EFB2_00349 at 364.719 kb on + strand, within EFB2_00349 at 364.720 kb on - strand, within EFB2_00349 at 364.726 kb on - strand, within EFB2_00349 at 364.735 kb on + strand, within EFB2_00349 at 364.735 kb on + strand, within EFB2_00349 at 364.735 kb on + strand, within EFB2_00349 at 364.735 kb on + strand, within EFB2_00349 at 364.735 kb on + strand, within EFB2_00349 at 364.736 kb on - strand, within EFB2_00349 at 364.736 kb on - strand, within EFB2_00349 at 364.736 kb on - strand, within EFB2_00349 at 364.737 kb on + strand, within EFB2_00349 at 364.737 kb on + strand, within EFB2_00349 at 364.737 kb on + strand, within EFB2_00349 at 364.737 kb on + strand, within EFB2_00349 at 364.737 kb on + strand, within EFB2_00349 at 364.737 kb on + strand, within EFB2_00349 at 364.738 kb on - strand, within EFB2_00349 at 364.763 kb on + strand at 364.764 kb on - strand at 364.764 kb on - strand at 364.774 kb on + strand at 364.774 kb on + strand at 364.774 kb on + strand at 364.774 kb on + strand at 364.774 kb on + strand at 364.775 kb on - strand at 364.775 kb on - strand at 364.775 kb on - strand at 364.775 kb on - strand at 364.775 kb on - strand at 364.775 kb on - strand at 364.775 kb on - strand at 364.775 kb on - strand at 364.776 kb on - strand at 364.780 kb on + strand at 364.780 kb on + strand at 364.788 kb on - strand at 364.788 kb on - strand at 364.794 kb on - strand at 364.794 kb on - strand at 364.899 kb on + strand, within EFB2_00350 at 364.913 kb on + strand, within EFB2_00350 at 364.913 kb on + strand, within EFB2_00350 at 364.913 kb on + strand, within EFB2_00350 at 364.913 kb on + strand, within EFB2_00350 at 364.913 kb on + strand, within EFB2_00350 at 364.913 kb on + strand, within EFB2_00350 at 364.913 kb on + strand, within EFB2_00350 at 364.913 kb on + strand, within EFB2_00350 at 364.913 kb on + strand, within EFB2_00350 at 364.913 kb on + strand, within EFB2_00350 at 364.913 kb on + strand, within EFB2_00350 at 364.913 kb on + strand, within EFB2_00350 at 364.914 kb on - strand, within EFB2_00350 at 364.914 kb on - strand, within EFB2_00350 at 364.914 kb on - strand, within EFB2_00350 at 364.914 kb on - strand, within EFB2_00350 at 364.914 kb on - strand, within EFB2_00350 at 364.914 kb on - strand, within EFB2_00350 at 364.914 kb on - strand, within EFB2_00350 at 364.914 kb on - strand, within EFB2_00350 at 364.914 kb on - strand, within EFB2_00350 at 364.914 kb on - strand, within EFB2_00350 at 364.915 kb on - strand, within EFB2_00350 at 365.022 kb on + strand at 365.022 kb on + strand at 365.022 kb on + strand at 365.022 kb on + strand at 365.022 kb on + strand at 365.023 kb on - strand at 365.023 kb on - strand at 365.036 kb on + strand at 365.036 kb on + strand at 365.037 kb on - strand at 365.039 kb on + strand at 365.039 kb on + strand at 365.039 kb on + strand at 365.040 kb on - strand at 365.040 kb on - strand at 365.040 kb on - strand at 365.075 kb on + strand at 365.075 kb on + strand at 365.076 kb on - strand at 365.076 kb on - strand at 365.076 kb on - strand at 365.076 kb on - strand at 365.076 kb on - strand at 365.076 kb on - strand at 365.084 kb on + strand at 365.085 kb on - strand at 365.116 kb on + strand, within EFB2_00351 at 365.116 kb on + strand, within EFB2_00351 at 365.116 kb on + strand, within EFB2_00351 at 365.116 kb on + strand, within EFB2_00351 at 365.116 kb on + strand, within EFB2_00351 at 365.116 kb on + strand, within EFB2_00351 at 365.116 kb on + strand, within EFB2_00351 at 365.116 kb on + strand, within EFB2_00351 at 365.116 kb on + strand, within EFB2_00351 at 365.116 kb on + strand, within EFB2_00351 at 365.116 kb on + strand, within EFB2_00351 at 365.116 kb on + strand, within EFB2_00351 at 365.116 kb on + strand, within EFB2_00351 at 365.116 kb on + strand, within EFB2_00351 at 365.116 kb on + strand, within EFB2_00351 at 365.117 kb on - strand, within EFB2_00351 at 365.117 kb on - strand, within EFB2_00351 at 365.117 kb on - strand, within EFB2_00351 at 365.117 kb on - strand, within EFB2_00351 at 365.117 kb on - strand, within EFB2_00351 at 365.117 kb on - strand, within EFB2_00351 at 365.117 kb on - strand, within EFB2_00351 at 365.117 kb on - strand, within EFB2_00351 at 365.117 kb on - strand, within EFB2_00351 at 365.117 kb on - strand, within EFB2_00351 at 365.117 kb on - strand, within EFB2_00351 at 365.117 kb on - strand, within EFB2_00351 at 365.117 kb on - strand, within EFB2_00351 at 365.117 kb on - strand, within EFB2_00351 at 365.117 kb on - strand, within EFB2_00351 at 365.117 kb on - strand, within EFB2_00351 at 365.117 kb on - strand, within EFB2_00351 at 365.117 kb on - strand, within EFB2_00351 at 365.117 kb on - strand, within EFB2_00351 at 365.117 kb on - strand, within EFB2_00351 at 365.171 kb on + strand, within EFB2_00351 at 365.171 kb on + strand, within EFB2_00351 at 365.171 kb on + strand, within EFB2_00351 at 365.171 kb on + strand, within EFB2_00351 at 365.171 kb on + strand, within EFB2_00351 at 365.171 kb on + strand, within EFB2_00351 at 365.171 kb on + strand, within EFB2_00351 at 365.172 kb on - strand, within EFB2_00351 at 365.172 kb on - strand, within EFB2_00351 at 365.172 kb on - strand, within EFB2_00351 at 365.172 kb on - strand, within EFB2_00351 at 365.172 kb on - strand, within EFB2_00351 at 365.172 kb on - strand, within EFB2_00351 at 365.172 kb on - strand, within EFB2_00351 at 365.172 kb on - strand, within EFB2_00351 at 365.202 kb on + strand, within EFB2_00351 at 365.202 kb on + strand, within EFB2_00351 at 365.230 kb on + strand, within EFB2_00351 at 365.230 kb on + strand, within EFB2_00351 at 365.230 kb on + strand, within EFB2_00351 at 365.230 kb on + strand, within EFB2_00351 at 365.231 kb on - strand, within EFB2_00351 at 365.231 kb on - strand, within EFB2_00351 at 365.231 kb on - strand, within EFB2_00351 at 365.231 kb on - strand, within EFB2_00351 at 365.231 kb on - strand, within EFB2_00351 at 365.268 kb on + strand, within EFB2_00351 at 365.268 kb on + strand, within EFB2_00351 at 365.268 kb on + strand, within EFB2_00351 at 365.269 kb on - strand, within EFB2_00351 at 365.269 kb on - strand, within EFB2_00351 at 365.271 kb on + strand, within EFB2_00351 at 365.272 kb on - strand, within EFB2_00351 at 365.272 kb on - strand, within EFB2_00351 at 365.272 kb on - strand, within EFB2_00351 at 365.272 kb on - strand, within EFB2_00351 at 365.272 kb on - strand, within EFB2_00351 at 365.272 kb on - strand, within EFB2_00351 at 365.272 kb on - strand, within EFB2_00351 at 365.272 kb on - strand, within EFB2_00351 at 365.272 kb on - strand, within EFB2_00351 at 365.272 kb on - strand, within EFB2_00351 at 365.341 kb on + strand, within EFB2_00351 at 365.341 kb on + strand, within EFB2_00351 at 365.341 kb on + strand, within EFB2_00351 at 365.341 kb on + strand, within EFB2_00351 at 365.341 kb on + strand, within EFB2_00351 at 365.341 kb on + strand, within EFB2_00351 at 365.342 kb on - strand, within EFB2_00351 at 365.342 kb on - strand, within EFB2_00351 at 365.342 kb on - strand, within EFB2_00351 at 365.342 kb on - strand, within EFB2_00351 at 365.342 kb on - strand, within EFB2_00351 at 365.342 kb on - strand, within EFB2_00351 at 365.342 kb on - strand, within EFB2_00351 at 365.358 kb on + strand, within EFB2_00351 at 365.358 kb on + strand, within EFB2_00351 at 365.358 kb on + strand, within EFB2_00351 at 365.359 kb on - strand, within EFB2_00351 at 365.359 kb on - strand, within EFB2_00351 at 365.362 kb on + strand, within EFB2_00351 at 365.362 kb on + strand, within EFB2_00351 at 365.362 kb on + strand, within EFB2_00351 at 365.362 kb on + strand, within EFB2_00351 at 365.362 kb on + strand, within EFB2_00351 at 365.362 kb on + strand, within EFB2_00351 at 365.363 kb on - strand, within EFB2_00351 at 365.363 kb on - strand, within EFB2_00351 at 365.502 kb on + strand, within EFB2_00351 at 365.502 kb on + strand, within EFB2_00351 at 365.502 kb on + strand, within EFB2_00351 at 365.502 kb on + strand, within EFB2_00351 at 365.503 kb on - strand, within EFB2_00351 at 365.550 kb on + strand, within EFB2_00351 at 365.550 kb on + strand, within EFB2_00351 at 365.551 kb on - strand, within EFB2_00351 at 365.569 kb on - strand, within EFB2_00351 at 365.569 kb on - strand, within EFB2_00351 at 365.637 kb on + strand at 365.637 kb on + strand at 365.637 kb on + strand at 365.637 kb on + strand at 365.638 kb on - strand at 365.638 kb on - strand at 365.638 kb on - strand at 365.638 kb on - strand at 365.638 kb on - strand at 365.638 kb on - strand at 365.658 kb on + strand at 365.658 kb on + strand at 365.659 kb on - strand at 365.659 kb on - strand at 365.659 kb on - strand at 365.659 kb on - strand at 365.665 kb on + strand at 365.665 kb on + strand at 365.665 kb on + strand at 365.665 kb on + strand at 365.665 kb on + strand at 365.665 kb on + strand at 365.665 kb on + strand at 365.665 kb on + strand at 365.665 kb on + strand at 365.665 kb on + strand at 365.665 kb on + strand at 365.665 kb on + strand at 365.665 kb on + strand at 365.665 kb on + strand at 365.665 kb on + strand at 365.665 kb on + strand at 365.665 kb on + strand at 365.665 kb on + strand at 365.666 kb on - strand at 365.666 kb on - strand at 365.666 kb on - strand at 365.666 kb on - strand at 365.666 kb on - strand at 365.666 kb on - strand at 365.666 kb on - strand at 365.666 kb on - strand at 365.666 kb on - strand at 365.666 kb on - strand at 365.666 kb on - strand at 365.666 kb on - strand at 365.666 kb on - strand at 365.666 kb on - strand at 365.666 kb on - strand at 365.666 kb on - strand at 365.666 kb on - strand at 365.666 kb on - strand at 365.666 kb on - strand at 365.666 kb on - strand at 365.666 kb on - strand at 365.666 kb on - strand at 365.666 kb on - strand at 365.666 kb on - strand at 365.666 kb on - strand at 365.666 kb on - strand at 365.666 kb on - strand at 365.666 kb on - strand at 365.666 kb on - strand at 365.666 kb on - strand at 365.666 kb on - strand at 365.666 kb on - strand at 365.666 kb on - strand at 365.666 kb on - strand at 365.688 kb on + strand at 365.688 kb on + strand at 365.693 kb on + strand at 365.693 kb on + strand at 365.693 kb on + strand at 365.693 kb on + strand at 365.694 kb on - strand at 365.694 kb on - strand at 365.694 kb on - strand at 365.694 kb on - strand at 365.694 kb on - strand at 365.700 kb on + strand at 365.700 kb on + strand at 365.700 kb on + strand at 365.700 kb on + strand at 365.700 kb on + strand at 365.700 kb on + strand at 365.705 kb on + strand at 365.705 kb on + strand at 365.705 kb on + strand at 365.705 kb on + strand at 365.705 kb on + strand at 365.705 kb on + strand at 365.705 kb on + strand at 365.705 kb on + strand at 365.728 kb on + strand at 365.728 kb on + strand at 365.728 kb on + strand at 365.728 kb on + strand at 365.728 kb on + strand at 365.728 kb on + strand at 365.728 kb on + strand at 365.728 kb on + strand at 365.728 kb on + strand at 365.728 kb on + strand at 365.728 kb on + strand at 365.728 kb on + strand at 365.728 kb on + strand at 365.728 kb on + strand at 365.728 kb on + strand at 365.728 kb on + strand at 365.728 kb on + strand at 365.728 kb on + strand at 365.728 kb on + strand at 365.728 kb on + strand at 365.728 kb on + strand at 365.728 kb on + strand at 365.728 kb on + strand at 365.728 kb on + strand at 365.728 kb on + strand at 365.728 kb on + strand at 365.728 kb on + strand at 365.728 kb on + strand at 365.728 kb on + strand at 365.728 kb on + strand at 365.728 kb on + strand at 365.728 kb on + strand at 365.728 kb on + strand at 365.728 kb on + strand at 365.728 kb on + strand at 365.728 kb on + strand at 365.732 kb on + strand at 365.732 kb on + strand at 365.732 kb on + strand at 365.732 kb on + strand at 365.732 kb on + strand at 365.732 kb on + strand at 365.732 kb on + strand at 365.732 kb on + strand at 365.732 kb on + strand at 365.732 kb on + strand at 365.732 kb on + strand at 365.732 kb on + strand at 365.732 kb on + strand at 365.732 kb on + strand at 365.732 kb on + strand at 365.732 kb on + strand at 365.732 kb on + strand at 365.732 kb on + strand at 365.732 kb on + strand at 365.732 kb on + strand at 365.732 kb on + strand at 365.732 kb on + strand at 365.732 kb on + strand at 365.732 kb on + strand at 365.732 kb on + strand at 365.732 kb on + strand at 365.732 kb on + strand at 365.732 kb on + strand at 365.732 kb on + strand at 365.732 kb on + strand at 365.732 kb on + strand at 365.732 kb on + strand at 365.732 kb on + strand at 365.732 kb on + strand at 365.732 kb on + strand at 365.732 kb on + strand at 365.732 kb on + strand at 365.732 kb on + strand at 365.732 kb on + strand at 365.732 kb on + strand at 365.732 kb on + strand at 365.732 kb on + strand at 365.736 kb on + strand at 365.736 kb on + strand at 365.736 kb on + strand at 365.736 kb on + strand at 365.736 kb on + strand at 365.736 kb on + strand at 365.736 kb on + strand at 365.736 kb on + strand at 365.736 kb on + strand at 365.736 kb on + strand at 365.736 kb on + strand at 365.736 kb on + strand at 365.736 kb on + strand at 365.736 kb on + strand at 365.736 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) remove 363,872 - EFB2_00348 0.35 +4.2 363,883 + EFB2_00348 0.37 +0.5 363,883 + EFB2_00348 0.37 -0.3 363,883 + EFB2_00348 0.37 -0.4 363,883 + EFB2_00348 0.37 +0.6 363,883 + EFB2_00348 0.37 -2.1 363,883 + EFB2_00348 0.37 +0.7 363,883 + EFB2_00348 0.37 -0.4 363,883 + EFB2_00348 0.37 -1.0 363,884 - EFB2_00348 0.37 -0.9 363,884 - EFB2_00348 0.37 +0.1 363,884 - EFB2_00348 0.37 +1.3 363,884 - EFB2_00348 0.37 +2.5 363,894 + EFB2_00348 0.39 +0.4 363,894 + EFB2_00348 0.39 +1.3 363,894 + EFB2_00348 0.39 +0.9 363,894 + EFB2_00348 0.39 +0.7 363,895 - EFB2_00348 0.39 -0.1 363,895 - EFB2_00348 0.39 +0.4 363,895 - EFB2_00348 0.39 +0.5 363,916 + EFB2_00348 0.42 +1.4 363,916 + EFB2_00348 0.42 +1.6 363,926 + EFB2_00348 0.44 -1.5 363,926 + EFB2_00348 0.44 -1.0 363,999 + EFB2_00348 0.56 -1.8 363,999 + EFB2_00348 0.56 +2.2 363,999 + EFB2_00348 0.56 +1.5 363,999 + EFB2_00348 0.56 -0.4 363,999 + EFB2_00348 0.56 -2.6 363,999 + EFB2_00348 0.56 -0.7 363,999 + EFB2_00348 0.56 -1.6 363,999 + EFB2_00348 0.56 +0.9 364,000 - EFB2_00348 0.56 -2.2 364,000 - EFB2_00348 0.56 +0.5 364,000 - EFB2_00348 0.56 -0.8 364,000 - EFB2_00348 0.56 -2.4 364,000 - EFB2_00348 0.56 -0.5 364,000 - EFB2_00348 0.56 -4.0 364,000 - EFB2_00348 0.56 +0.7 364,000 - EFB2_00348 0.56 +0.2 364,000 - EFB2_00348 0.56 +0.3 364,008 + EFB2_00348 0.57 +0.4 364,008 + EFB2_00348 0.57 +0.3 364,008 + EFB2_00348 0.57 -1.4 364,008 + EFB2_00348 0.57 -0.2 364,008 + EFB2_00348 0.57 -0.4 364,008 + EFB2_00348 0.57 -1.0 364,008 + EFB2_00348 0.57 +0.2 364,008 + EFB2_00348 0.57 -0.1 364,008 + EFB2_00348 0.57 -3.2 364,008 + EFB2_00348 0.57 +0.7 364,008 + EFB2_00348 0.57 -1.4 364,008 + EFB2_00348 0.57 +2.3 364,008 + EFB2_00348 0.57 +1.3 364,008 + EFB2_00348 0.57 +3.3 364,009 - EFB2_00348 0.57 +0.1 364,009 - EFB2_00348 0.57 -0.3 364,009 - EFB2_00348 0.57 -0.4 364,009 - EFB2_00348 0.57 +1.0 364,009 - EFB2_00348 0.57 -0.1 364,009 - EFB2_00348 0.57 -1.0 364,009 - EFB2_00348 0.57 -1.3 364,009 - EFB2_00348 0.57 -0.5 364,009 - EFB2_00348 0.57 -0.5 364,009 - EFB2_00348 0.57 +0.6 364,009 - EFB2_00348 0.57 +0.1 364,009 - EFB2_00348 0.57 -3.2 364,044 + EFB2_00348 0.63 +0.1 364,044 + EFB2_00348 0.63 -0.3 364,044 + EFB2_00348 0.63 +0.3 364,044 + EFB2_00348 0.63 +0.6 364,044 + EFB2_00348 0.63 -1.3 364,044 + EFB2_00348 0.63 +0.4 364,045 - EFB2_00348 0.63 +0.2 364,045 - EFB2_00348 0.63 -1.2 364,045 - EFB2_00348 0.63 +1.4 364,045 - EFB2_00348 0.63 -2.2 364,045 - EFB2_00348 0.63 +0.4 364,045 - EFB2_00348 0.63 +0.1 364,045 - EFB2_00348 0.63 +1.4 364,045 - EFB2_00348 0.63 +0.1 364,119 + EFB2_00348 0.75 -0.7 364,119 + EFB2_00348 0.75 -1.4 364,119 + EFB2_00348 0.75 +1.0 364,119 + EFB2_00348 0.75 -2.9 364,119 + EFB2_00348 0.75 -3.3 364,119 + EFB2_00348 0.75 +0.6 364,119 + EFB2_00348 0.75 -2.5 364,120 - EFB2_00348 0.75 +0.4 364,120 - EFB2_00348 0.75 +1.7 364,120 - EFB2_00348 0.75 -1.0 364,120 - EFB2_00348 0.75 -0.1 364,120 - EFB2_00348 0.75 -1.3 364,120 - EFB2_00348 0.75 -0.1 364,120 - EFB2_00348 0.75 -0.9 364,120 - EFB2_00348 0.75 -1.2 364,123 + EFB2_00348 0.75 +0.7 364,123 + EFB2_00348 0.75 +0.8 364,123 + EFB2_00348 0.75 -2.2 364,123 + EFB2_00348 0.75 -0.4 364,123 + EFB2_00348 0.75 +0.6 364,123 + EFB2_00348 0.75 -0.9 364,123 + EFB2_00348 0.75 +0.7 364,123 + EFB2_00348 0.75 -0.1 364,123 + EFB2_00348 0.75 -0.0 364,123 + EFB2_00348 0.75 +1.9 364,123 + EFB2_00348 0.75 +0.7 364,123 + EFB2_00348 0.75 +0.7 364,123 + EFB2_00348 0.75 +0.7 364,123 + EFB2_00348 0.75 +0.8 364,124 - EFB2_00348 0.76 -2.0 364,124 - EFB2_00348 0.76 -0.3 364,124 - EFB2_00348 0.76 +0.4 364,124 - EFB2_00348 0.76 +0.5 364,124 - EFB2_00348 0.76 +0.7 364,124 - EFB2_00348 0.76 -0.8 364,124 - EFB2_00348 0.76 +0.5 364,124 - EFB2_00348 0.76 +0.5 364,124 - EFB2_00348 0.76 +0.4 364,124 - EFB2_00348 0.76 -0.1 364,124 - EFB2_00348 0.76 +0.4 364,186 + EFB2_00348 0.85 +0.6 364,186 + EFB2_00348 0.85 -1.3 364,186 + EFB2_00348 0.85 -0.1 364,186 + EFB2_00348 0.85 +0.2 364,218 + +0.0 364,218 + -0.4 364,235 + -0.7 364,235 + -0.1 364,235 + +0.1 364,235 + -2.2 364,235 + -1.5 364,236 - +0.3 364,236 - -0.3 364,236 - +1.4 364,236 - +1.2 364,236 - +0.6 364,236 - -2.4 364,279 + -0.4 364,279 + -2.4 364,279 + -1.0 364,279 + +0.5 364,279 + -0.5 364,280 - +0.0 364,280 - -1.3 364,280 - +0.6 364,280 - -1.7 364,280 - -1.7 364,280 - +1.1 364,280 - +0.4 364,280 - -0.9 364,280 - +0.9 364,280 - -2.2 364,319 + -0.4 364,320 - -2.4 364,320 - +0.3 364,369 + -1.4 364,369 + -0.9 364,369 + -1.4 364,369 + -1.0 364,369 + -0.1 364,370 - -0.1 364,370 - -1.7 364,370 - -0.6 364,370 - +0.3 364,370 - +0.4 364,381 + +1.4 364,382 - +1.7 364,382 - -0.3 364,382 - +0.2 364,388 - -2.2 364,388 - -0.3 364,388 - +2.2 364,446 + +0.9 364,512 + EFB2_00349 0.26 +0.1 364,512 + EFB2_00349 0.26 +0.4 364,513 - EFB2_00349 0.27 +0.7 364,575 + EFB2_00349 0.44 -1.7 364,576 - EFB2_00349 0.44 -1.0 364,620 + EFB2_00349 0.56 +2.0 364,620 + EFB2_00349 0.56 +1.1 364,620 + EFB2_00349 0.56 +1.2 364,620 + EFB2_00349 0.56 +0.5 364,620 + EFB2_00349 0.56 -1.1 364,620 + EFB2_00349 0.56 -3.1 364,620 + EFB2_00349 0.56 +0.4 364,620 + EFB2_00349 0.56 -2.0 364,620 + EFB2_00349 0.56 +0.0 364,620 + EFB2_00349 0.56 -3.3 364,620 + EFB2_00349 0.56 -2.8 364,620 + EFB2_00349 0.56 -0.4 364,620 + EFB2_00349 0.56 -0.8 364,620 + EFB2_00349 0.56 +0.5 364,620 + EFB2_00349 0.56 -2.2 364,620 + EFB2_00349 0.56 +0.1 364,620 + EFB2_00349 0.56 -0.3 364,620 + EFB2_00349 0.56 +0.1 364,620 + EFB2_00349 0.56 -0.6 364,620 + EFB2_00349 0.56 +1.2 364,620 + EFB2_00349 0.56 -0.1 364,620 + EFB2_00349 0.56 -0.4 364,620 + EFB2_00349 0.56 +0.4 364,620 + EFB2_00349 0.56 -1.6 364,620 + EFB2_00349 0.56 -0.5 364,620 + EFB2_00349 0.56 +0.1 364,620 + EFB2_00349 0.56 +0.3 364,620 + EFB2_00349 0.56 -0.3 364,620 + EFB2_00349 0.56 +0.5 364,620 + EFB2_00349 0.56 -0.0 364,620 + EFB2_00349 0.56 +0.6 364,621 - EFB2_00349 0.57 -0.1 364,621 - EFB2_00349 0.57 +1.9 364,621 - EFB2_00349 0.57 +0.8 364,621 - EFB2_00349 0.57 -2.5 364,621 - EFB2_00349 0.57 -0.2 364,621 - EFB2_00349 0.57 -0.7 364,621 - EFB2_00349 0.57 +2.7 364,621 - EFB2_00349 0.57 -0.3 364,621 - EFB2_00349 0.57 +1.6 364,621 - EFB2_00349 0.57 -0.1 364,621 - EFB2_00349 0.57 -1.5 364,621 - EFB2_00349 0.57 -0.5 364,621 - EFB2_00349 0.57 -0.8 364,621 - EFB2_00349 0.57 +1.5 364,621 - EFB2_00349 0.57 +0.5 364,621 - EFB2_00349 0.57 +1.2 364,621 - EFB2_00349 0.57 -1.4 364,621 - EFB2_00349 0.57 +0.5 364,621 - EFB2_00349 0.57 -2.3 364,621 - EFB2_00349 0.57 +1.1 364,621 - EFB2_00349 0.57 +1.3 364,621 - EFB2_00349 0.57 -1.6 364,621 - EFB2_00349 0.57 +0.2 364,623 + EFB2_00349 0.57 +0.6 364,623 + EFB2_00349 0.57 -0.2 364,623 + EFB2_00349 0.57 -0.1 364,623 + EFB2_00349 0.57 +0.8 364,623 + EFB2_00349 0.57 -1.5 364,623 + EFB2_00349 0.57 -3.8 364,623 + EFB2_00349 0.57 -1.0 364,623 + EFB2_00349 0.57 +1.0 364,623 + EFB2_00349 0.57 +0.4 364,623 + EFB2_00349 0.57 +0.7 364,623 + EFB2_00349 0.57 -1.8 364,623 + EFB2_00349 0.57 +0.2 364,623 + EFB2_00349 0.57 +1.9 364,623 + EFB2_00349 0.57 -0.8 364,623 + EFB2_00349 0.57 -2.0 364,624 - EFB2_00349 0.57 -0.3 364,624 - EFB2_00349 0.57 +1.2 364,624 - EFB2_00349 0.57 +0.8 364,624 - EFB2_00349 0.57 -1.9 364,624 - EFB2_00349 0.57 +0.9 364,624 - EFB2_00349 0.57 -1.3 364,624 - EFB2_00349 0.57 -1.1 364,624 - EFB2_00349 0.57 -2.0 364,624 - EFB2_00349 0.57 +0.5 364,624 - EFB2_00349 0.57 -0.6 364,624 - EFB2_00349 0.57 +1.3 364,624 - EFB2_00349 0.57 +0.6 364,624 - EFB2_00349 0.57 -0.9 364,631 - EFB2_00349 0.59 +0.9 364,696 + EFB2_00349 0.78 +0.0 364,696 + EFB2_00349 0.78 +0.4 364,697 - EFB2_00349 0.78 -0.4 364,697 - EFB2_00349 0.78 -2.4 364,719 + EFB2_00349 0.84 -0.0 364,720 - EFB2_00349 0.84 -1.2 364,726 - EFB2_00349 0.86 +0.1 364,735 + EFB2_00349 0.88 -1.7 364,735 + EFB2_00349 0.88 -0.7 364,735 + EFB2_00349 0.88 -2.6 364,735 + EFB2_00349 0.88 -0.2 364,735 + EFB2_00349 0.88 +0.3 364,736 - EFB2_00349 0.89 -0.2 364,736 - EFB2_00349 0.89 +0.9 364,736 - EFB2_00349 0.89 +1.3 364,737 + EFB2_00349 0.89 +0.9 364,737 + EFB2_00349 0.89 +1.0 364,737 + EFB2_00349 0.89 -0.5 364,737 + EFB2_00349 0.89 -0.2 364,737 + EFB2_00349 0.89 -0.1 364,737 + EFB2_00349 0.89 +0.2 364,738 - EFB2_00349 0.89 -2.9 364,763 + -0.7 364,764 - -1.7 364,764 - +0.1 364,774 + +0.4 364,774 + -0.0 364,774 + -0.4 364,774 + -0.2 364,774 + -0.1 364,775 - +1.7 364,775 - +2.3 364,775 - -2.1 364,775 - +0.9 364,775 - +1.1 364,775 - +1.9 364,775 - +1.4 364,775 - +0.1 364,776 - +1.3 364,780 + -4.0 364,780 + -1.6 364,788 - -1.2 364,788 - -0.7 364,794 - +1.0 364,794 - +0.0 364,899 + EFB2_00350 0.44 +2.7 364,913 + EFB2_00350 0.50 +1.1 364,913 + EFB2_00350 0.50 -0.6 364,913 + EFB2_00350 0.50 +1.1 364,913 + EFB2_00350 0.50 -1.0 364,913 + EFB2_00350 0.50 -2.0 364,913 + EFB2_00350 0.50 +1.8 364,913 + EFB2_00350 0.50 -0.3 364,913 + EFB2_00350 0.50 -0.7 364,913 + EFB2_00350 0.50 +0.8 364,913 + EFB2_00350 0.50 +0.0 364,913 + EFB2_00350 0.50 -0.3 364,913 + EFB2_00350 0.50 -0.5 364,914 - EFB2_00350 0.50 -1.8 364,914 - EFB2_00350 0.50 -1.2 364,914 - EFB2_00350 0.50 -2.8 364,914 - EFB2_00350 0.50 +0.6 364,914 - EFB2_00350 0.50 +0.4 364,914 - EFB2_00350 0.50 -0.4 364,914 - EFB2_00350 0.50 -2.3 364,914 - EFB2_00350 0.50 -1.4 364,914 - EFB2_00350 0.50 +1.4 364,914 - EFB2_00350 0.50 +0.9 364,915 - EFB2_00350 0.50 -3.4 365,022 + +0.4 365,022 + -1.1 365,022 + -0.4 365,022 + +1.0 365,022 + +1.1 365,023 - +1.5 365,023 - -0.3 365,036 + +0.8 365,036 + -1.6 365,037 - -0.3 365,039 + +0.7 365,039 + -2.7 365,039 + -2.0 365,040 - +0.3 365,040 - -0.7 365,040 - -0.0 365,075 + -3.3 365,075 + +0.1 365,076 - -0.1 365,076 - -0.7 365,076 - +0.7 365,076 - -0.0 365,076 - -1.8 365,076 - -0.4 365,084 + -0.1 365,085 - -0.1 365,116 + EFB2_00351 0.13 +0.1 365,116 + EFB2_00351 0.13 -0.6 365,116 + EFB2_00351 0.13 -2.8 365,116 + EFB2_00351 0.13 +1.3 365,116 + EFB2_00351 0.13 -1.9 365,116 + EFB2_00351 0.13 +2.7 365,116 + EFB2_00351 0.13 +0.4 365,116 + EFB2_00351 0.13 -0.4 365,116 + EFB2_00351 0.13 -2.2 365,116 + EFB2_00351 0.13 +1.3 365,116 + EFB2_00351 0.13 +0.7 365,116 + EFB2_00351 0.13 -0.8 365,116 + EFB2_00351 0.13 -1.1 365,116 + EFB2_00351 0.13 +0.9 365,116 + EFB2_00351 0.13 -2.4 365,117 - EFB2_00351 0.13 +1.2 365,117 - EFB2_00351 0.13 -0.2 365,117 - EFB2_00351 0.13 -0.8 365,117 - EFB2_00351 0.13 +0.4 365,117 - EFB2_00351 0.13 +1.7 365,117 - EFB2_00351 0.13 +0.6 365,117 - EFB2_00351 0.13 +0.8 365,117 - EFB2_00351 0.13 -3.6 365,117 - EFB2_00351 0.13 +0.5 365,117 - EFB2_00351 0.13 +0.3 365,117 - EFB2_00351 0.13 -1.5 365,117 - EFB2_00351 0.13 +0.5 365,117 - EFB2_00351 0.13 -0.2 365,117 - EFB2_00351 0.13 -1.1 365,117 - EFB2_00351 0.13 +0.5 365,117 - EFB2_00351 0.13 -3.1 365,117 - EFB2_00351 0.13 +1.6 365,117 - EFB2_00351 0.13 -0.2 365,117 - EFB2_00351 0.13 -0.3 365,117 - EFB2_00351 0.13 -0.9 365,171 + EFB2_00351 0.22 -2.6 365,171 + EFB2_00351 0.22 +1.7 365,171 + EFB2_00351 0.22 +0.1 365,171 + EFB2_00351 0.22 +1.2 365,171 + EFB2_00351 0.22 +0.3 365,171 + EFB2_00351 0.22 -1.2 365,171 + EFB2_00351 0.22 +0.8 365,172 - EFB2_00351 0.22 -2.0 365,172 - EFB2_00351 0.22 -2.2 365,172 - EFB2_00351 0.22 -0.8 365,172 - EFB2_00351 0.22 -3.1 365,172 - EFB2_00351 0.22 +0.3 365,172 - EFB2_00351 0.22 -1.4 365,172 - EFB2_00351 0.22 -2.4 365,172 - EFB2_00351 0.22 +0.9 365,202 + EFB2_00351 0.27 +1.1 365,202 + EFB2_00351 0.27 -0.6 365,230 + EFB2_00351 0.32 -2.6 365,230 + EFB2_00351 0.32 -0.0 365,230 + EFB2_00351 0.32 -0.4 365,230 + EFB2_00351 0.32 +0.6 365,231 - 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Or see this region's nucleotide sequence