Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_02685

Experiment: Laminarin from Laminaria digitata 2.5 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Laminarin from Laminaria digitata 2.5 mg/mL (C)
89,295	+		BACOVA_02683	0.71	-1.4
89,314	+		BACOVA_02683	0.73	+0.2
89,320	+		BACOVA_02683	0.73	+0.0
89,380	-		BACOVA_02683	0.79	+0.4
89,382	-		BACOVA_02683	0.79	-2.6
89,382	-		BACOVA_02683	0.79	-0.9
89,382	-		BACOVA_02683	0.79	-0.6
89,388	+		BACOVA_02683	0.80	-0.2
89,458	+		BACOVA_02683	0.87	+0.9
89,470	+		BACOVA_02683	0.88	-0.0
89,477	+		BACOVA_02683	0.89	-2.3
89,478	-		BACOVA_02683	0.89	-0.4
89,537	+				-0.9
89,543	+				-0.8
89,555	+				-1.3
89,556	-				-0.5
89,556	-				-1.4
89,558	-				-0.7
89,562	+				-0.5
89,562	+				-0.3
89,562	+				+0.1
89,563	-				-1.4
89,563	-				+0.3
89,563	-				+3.0
89,563	-				-1.0
89,564	+				-1.7
89,601	+				+1.1
89,613	+				+1.0
89,617	-				-0.4
89,628	+				-0.4
89,629	-				+0.3
89,645	+				-0.6
89,713	-				-1.6
89,758	+		BACOVA_02684	0.17	-0.3
89,758	+		BACOVA_02684	0.17	-1.1
89,799	+		BACOVA_02684	0.24	+0.2
89,799	+		BACOVA_02684	0.24	-1.0
89,800	-		BACOVA_02684	0.25	-1.3
89,800	-		BACOVA_02684	0.25	+1.1
89,800	-		BACOVA_02684	0.25	-0.6
89,801	+		BACOVA_02684	0.25	-0.8
89,802	-		BACOVA_02684	0.25	-0.3
89,809	-		BACOVA_02684	0.26	+0.9
89,809	-		BACOVA_02684	0.26	-0.1
89,855	-		BACOVA_02684	0.34	-2.3
89,882	-		BACOVA_02684	0.39	-0.4
89,934	+		BACOVA_02684	0.48	-0.4
89,935	-		BACOVA_02684	0.48	-0.8
89,946	+		BACOVA_02684	0.50	-0.4
89,947	-		BACOVA_02684	0.50	-1.2
89,947	-		BACOVA_02684	0.50	-0.3
89,986	+		BACOVA_02684	0.57	+0.3
90,037	+		BACOVA_02684	0.65	-3.4
90,037	+		BACOVA_02684	0.65	+1.0
90,038	-		BACOVA_02684	0.65	-0.1
90,067	+		BACOVA_02684	0.70	-0.5
90,253	-				-1.6
90,259	-				-1.0
90,259	-				-1.4
90,263	+				-0.5
90,263	+				+0.1
90,299	-				-1.2
90,343	+				-1.6
90,347	+				-0.4
90,348	-				-2.0
90,348	-				-0.6
90,464	+		BACOVA_02685	0.10	-0.5
90,488	+		BACOVA_02685	0.12	+0.3
90,517	+		BACOVA_02685	0.13	-0.4
90,529	+		BACOVA_02685	0.14	+0.1
90,665	-		BACOVA_02685	0.21	-1.3
90,691	-		BACOVA_02685	0.22	-1.4
90,692	+		BACOVA_02685	0.23	+0.6
90,693	-		BACOVA_02685	0.23	-1.6
90,842	+		BACOVA_02685	0.31	-3.2
90,842	+		BACOVA_02685	0.31	-0.9
90,887	-		BACOVA_02685	0.33	-0.9
90,899	+		BACOVA_02685	0.34	-1.0
90,919	+		BACOVA_02685	0.35	+1.0
90,952	+		BACOVA_02685	0.36	-0.5
90,999	+		BACOVA_02685	0.39	-1.2
91,028	-		BACOVA_02685	0.40	-0.1
91,028	-		BACOVA_02685	0.40	-2.3
91,039	+		BACOVA_02685	0.41	-1.1
91,049	-		BACOVA_02685	0.42	-0.5
91,083	-		BACOVA_02685	0.43	-0.1
91,245	+		BACOVA_02685	0.52	-0.1
91,283	+		BACOVA_02685	0.54	-1.5
91,316	-		BACOVA_02685	0.56	-3.1
91,321	+		BACOVA_02685	0.56	+0.1
91,321	+		BACOVA_02685	0.56	-0.7
91,322	-		BACOVA_02685	0.56	-2.3
91,324	+		BACOVA_02685	0.56	-1.9
91,336	-		BACOVA_02685	0.57	+0.4
91,455	-		BACOVA_02685	0.63	-1.5
91,473	-		BACOVA_02685	0.64	-0.1
91,554	+		BACOVA_02685	0.68	-1.1
91,557	-		BACOVA_02685	0.69	-1.6
91,590	+		BACOVA_02685	0.70	-0.0
91,612	+		BACOVA_02685	0.72	-0.8
91,626	-		BACOVA_02685	0.72	-1.6
91,626	-		BACOVA_02685	0.72	-0.2
91,627	+		BACOVA_02685	0.72	-1.1
91,688	-		BACOVA_02685	0.76	-1.1
91,699	+		BACOVA_02685	0.76	+0.5
91,699	+		BACOVA_02685	0.76	+0.7
91,700	-		BACOVA_02685	0.76	-0.0
91,771	+		BACOVA_02685	0.80	-0.9
91,786	-		BACOVA_02685	0.81	-0.2
91,891	+		BACOVA_02685	0.86	+0.0
91,910	-		BACOVA_02685	0.87	+1.1
92,036	+				-0.9
92,036	+				+1.1
92,036	+				-1.5
92,125	+				+0.2
92,125	+				+1.2
92,146	+				+1.1
92,146	+				+0.3
92,146	+				+1.2
92,147	-				-1.1
92,166	+				+0.1
92,175	-				-0.1
92,206	-				+0.0
92,209	+				-0.2
92,312	-		BACOVA_02686	0.12	-0.4
92,320	-		BACOVA_02686	0.13	+2.2
92,345	+		BACOVA_02686	0.15	-0.5
92,346	-		BACOVA_02686	0.15	+0.9
92,384	-		BACOVA_02686	0.18	-0.4
92,400	+		BACOVA_02686	0.19	+0.9
92,403	+		BACOVA_02686	0.19	+0.4
92,407	-		BACOVA_02686	0.20	-0.6
92,430	+		BACOVA_02686	0.21	+1.4
92,431	-		BACOVA_02686	0.22	+0.7
92,442	+		BACOVA_02686	0.22	-0.2
92,442	+		BACOVA_02686	0.22	+0.8
92,442	+		BACOVA_02686	0.22	-1.4
92,454	+		BACOVA_02686	0.23	-0.2
92,557	+		BACOVA_02686	0.32	-0.5
92,558	-		BACOVA_02686	0.32	-0.1
92,562	+		BACOVA_02686	0.32	+0.9
92,562	+		BACOVA_02686	0.32	-0.3
92,563	-		BACOVA_02686	0.32	-1.7
92,680	+		BACOVA_02686	0.41	-0.6
92,680	+		BACOVA_02686	0.41	-0.9
92,708	+		BACOVA_02686	0.43	-2.2
92,708	+		BACOVA_02686	0.43	+1.2
92,708	+		BACOVA_02686	0.43	-0.7
92,709	-		BACOVA_02686	0.44	-1.4
92,763	+		BACOVA_02686	0.48	+0.7
92,764	-		BACOVA_02686	0.48	+0.3
92,852	+		BACOVA_02686	0.55	-0.3
92,895	+		BACOVA_02686	0.58	-0.4
92,904	-		BACOVA_02686	0.59	-0.6
92,904	-		BACOVA_02686	0.59	-0.0
92,926	-		BACOVA_02686	0.61	-1.1
92,927	+		BACOVA_02686	0.61	-0.6
92,936	-		BACOVA_02686	0.61	+1.3
93,043	+		BACOVA_02686	0.70	-0.5
93,043	+		BACOVA_02686	0.70	+1.1
93,044	-		BACOVA_02686	0.70	-1.1
93,047	-		BACOVA_02686	0.70	-1.2
93,047	-		BACOVA_02686	0.70	+0.4
93,074	+		BACOVA_02686	0.72	-0.4
93,074	+		BACOVA_02686	0.72	-0.1
93,074	+		BACOVA_02686	0.72	-1.4
93,074	+		BACOVA_02686	0.72	-0.6
93,075	-		BACOVA_02686	0.72	-0.6
93,075	-		BACOVA_02686	0.72	-0.6
93,117	-		BACOVA_02686	0.76	-0.9
93,136	-		BACOVA_02686	0.77	-0.4
93,138	-		BACOVA_02686	0.77	+0.4