Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_03166

Experiment: Urea (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_03164 and MPMX26_03165 overlap by 4 nucleotidesMPMX26_03165 and MPMX26_03166 are separated by 18 nucleotidesMPMX26_03166 and MPMX26_03167 are separated by 140 nucleotides MPMX26_03164: MPMX26_03164 - Thiol:disulfide interchange protein DsbD, at 18,836 to 20,764 _03164 MPMX26_03165: MPMX26_03165 - Thiol-disulfide oxidoreductase ResA, at 20,761 to 21,606 _03165 MPMX26_03166: MPMX26_03166 - Thiol:disulfide interchange protein DsbG, at 21,625 to 22,374 _03166 MPMX26_03167: MPMX26_03167 - IS6 family transposase ISOur1, at 22,515 to 23,219 _03167 Position (kb) 21 22 23Strain fitness (log2 ratio) -1 0 1 2 3at 20.669 kb on + strandat 20.727 kb on - strandat 20.740 kb on + strandat 20.776 kb on + strandat 20.797 kb on + strandat 20.804 kb on + strandat 20.805 kb on - strandat 20.883 kb on + strand, within MPMX26_03165at 20.883 kb on + strand, within MPMX26_03165at 20.891 kb on - strand, within MPMX26_03165at 20.946 kb on - strand, within MPMX26_03165at 21.029 kb on + strand, within MPMX26_03165at 21.039 kb on + strand, within MPMX26_03165at 21.056 kb on + strand, within MPMX26_03165at 21.102 kb on + strand, within MPMX26_03165at 21.135 kb on + strand, within MPMX26_03165at 21.266 kb on + strand, within MPMX26_03165at 21.408 kb on - strand, within MPMX26_03165at 21.427 kb on - strand, within MPMX26_03165at 21.503 kb on - strand, within MPMX26_03165at 21.515 kb on + strand, within MPMX26_03165at 21.528 kb on - strandat 21.557 kb on + strandat 21.637 kb on + strandat 21.679 kb on + strandat 21.776 kb on + strand, within MPMX26_03166at 21.776 kb on + strand, within MPMX26_03166at 21.945 kb on + strand, within MPMX26_03166at 21.945 kb on + strand, within MPMX26_03166at 21.962 kb on - strand, within MPMX26_03166at 21.988 kb on + strand, within MPMX26_03166at 21.988 kb on + strand, within MPMX26_03166at 21.996 kb on - strand, within MPMX26_03166at 21.996 kb on - strand, within MPMX26_03166at 22.089 kb on + strand, within MPMX26_03166at 22.092 kb on - strand, within MPMX26_03166at 22.092 kb on - strand, within MPMX26_03166at 22.112 kb on + strand, within MPMX26_03166at 22.123 kb on - strand, within MPMX26_03166at 22.147 kb on - strand, within MPMX26_03166at 22.319 kb on + strandat 22.330 kb on + strandat 22.338 kb on - strandat 23.267 kb on + strandat 23.267 kb on + strandat 23.267 kb on + strandat 23.301 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Urea (N)
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20,669 + +1.0
20,727 - +1.6
20,740 + +0.0
20,776 + +0.0
20,797 + +0.0
20,804 + +0.5
20,805 - +0.6
20,883 + MPMX26_03165 0.14 +1.0
20,883 + MPMX26_03165 0.14 +0.6
20,891 - MPMX26_03165 0.15 +0.5
20,946 - MPMX26_03165 0.22 -0.4
21,029 + MPMX26_03165 0.32 -1.5
21,039 + MPMX26_03165 0.33 +0.3
21,056 + MPMX26_03165 0.35 -0.8
21,102 + MPMX26_03165 0.40 +1.2
21,135 + MPMX26_03165 0.44 +1.3
21,266 + MPMX26_03165 0.60 +0.8
21,408 - MPMX26_03165 0.76 +0.5
21,427 - MPMX26_03165 0.79 +2.9
21,503 - MPMX26_03165 0.88 +0.3
21,515 + MPMX26_03165 0.89 -0.4
21,528 - +0.5
21,557 + +0.0
21,637 + +1.8
21,679 + +0.2
21,776 + MPMX26_03166 0.20 +0.6
21,776 + MPMX26_03166 0.20 +0.6
21,945 + MPMX26_03166 0.43 +0.0
21,945 + MPMX26_03166 0.43 +0.1
21,962 - MPMX26_03166 0.45 +0.8
21,988 + MPMX26_03166 0.48 +1.2
21,988 + MPMX26_03166 0.48 +0.7
21,996 - MPMX26_03166 0.49 +0.3
21,996 - MPMX26_03166 0.49 -0.5
22,089 + MPMX26_03166 0.62 +0.4
22,092 - MPMX26_03166 0.62 +1.2
22,092 - MPMX26_03166 0.62 +1.0
22,112 + MPMX26_03166 0.65 +0.1
22,123 - MPMX26_03166 0.66 +0.8
22,147 - MPMX26_03166 0.70 -0.7
22,319 + +0.4
22,330 + +0.5
22,338 - +0.6
23,267 + -0.1
23,267 + +0.7
23,267 + +1.6
23,301 - +0.6

Or see this region's nucleotide sequence