Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_03127

Experiment: Urea (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_03126 and MPMX26_03127 are separated by 314 nucleotidesMPMX26_03127 and MPMX26_03128 are separated by 44 nucleotidesMPMX26_03128 and MPMX26_03129 are separated by 4 nucleotidesMPMX26_03129 and MPMX26_03130 are separated by 5 nucleotides MPMX26_03126: MPMX26_03126 - DNA-invertase hin, at 39,339 to 39,905 _03126 MPMX26_03127: MPMX26_03127 - Arsenate reductase, at 40,220 to 40,648 _03127 MPMX26_03128: MPMX26_03128 - hypothetical protein, at 40,693 to 41,016 _03128 MPMX26_03129: MPMX26_03129 - Arsenate reductase, at 41,021 to 41,494 _03129 MPMX26_03130: MPMX26_03130 - Arsenical-resistance protein Acr3, at 41,500 to 42,540 _03130 Position (kb) 40 41Strain fitness (log2 ratio) -2 -1 0 1 2at 39.417 kb on + strand, within MPMX26_03126at 39.435 kb on + strand, within MPMX26_03126at 39.448 kb on + strand, within MPMX26_03126at 39.512 kb on + strand, within MPMX26_03126at 39.858 kb on - strandat 39.873 kb on - strandat 39.873 kb on - strandat 39.881 kb on - strandat 40.243 kb on + strandat 40.250 kb on + strandat 40.255 kb on + strandat 40.267 kb on + strand, within MPMX26_03127at 40.349 kb on + strand, within MPMX26_03127at 40.376 kb on + strand, within MPMX26_03127at 40.412 kb on + strand, within MPMX26_03127at 40.412 kb on + strand, within MPMX26_03127at 40.454 kb on + strand, within MPMX26_03127at 40.454 kb on + strand, within MPMX26_03127at 40.520 kb on + strand, within MPMX26_03127at 40.527 kb on + strand, within MPMX26_03127at 40.527 kb on + strand, within MPMX26_03127at 40.686 kb on + strandat 40.686 kb on + strandat 40.735 kb on + strand, within MPMX26_03128at 40.735 kb on + strand, within MPMX26_03128at 40.737 kb on + strand, within MPMX26_03128at 40.831 kb on + strand, within MPMX26_03128at 40.832 kb on + strand, within MPMX26_03128at 40.832 kb on + strand, within MPMX26_03128at 40.850 kb on + strand, within MPMX26_03128at 40.850 kb on + strand, within MPMX26_03128at 40.861 kb on + strand, within MPMX26_03128at 40.886 kb on + strand, within MPMX26_03128at 40.886 kb on + strand, within MPMX26_03128at 40.888 kb on + strand, within MPMX26_03128at 40.888 kb on + strand, within MPMX26_03128at 40.888 kb on + strand, within MPMX26_03128at 40.893 kb on + strand, within MPMX26_03128at 40.954 kb on + strand, within MPMX26_03128at 40.962 kb on - strand, within MPMX26_03128at 40.971 kb on + strand, within MPMX26_03128at 40.979 kb on + strand, within MPMX26_03128at 40.979 kb on + strand, within MPMX26_03128at 41.102 kb on + strand, within MPMX26_03129at 41.111 kb on + strand, within MPMX26_03129at 41.113 kb on + strand, within MPMX26_03129at 41.125 kb on + strand, within MPMX26_03129at 41.125 kb on + strand, within MPMX26_03129at 41.168 kb on + strand, within MPMX26_03129at 41.189 kb on + strand, within MPMX26_03129at 41.225 kb on + strand, within MPMX26_03129at 41.230 kb on + strand, within MPMX26_03129at 41.235 kb on + strand, within MPMX26_03129at 41.255 kb on + strand, within MPMX26_03129at 41.255 kb on + strand, within MPMX26_03129at 41.257 kb on + strand, within MPMX26_03129at 41.257 kb on + strand, within MPMX26_03129at 41.273 kb on + strand, within MPMX26_03129at 41.315 kb on + strand, within MPMX26_03129at 41.315 kb on + strand, within MPMX26_03129at 41.315 kb on + strand, within MPMX26_03129at 41.333 kb on + strand, within MPMX26_03129at 41.563 kb on + strandat 41.563 kb on + strandat 41.563 kb on + strandat 41.571 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Urea (N)
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39,417 + MPMX26_03126 0.14 +0.7
39,435 + MPMX26_03126 0.17 +0.3
39,448 + MPMX26_03126 0.19 +1.2
39,512 + MPMX26_03126 0.31 -0.5
39,858 - +0.2
39,873 - +0.5
39,873 - -1.2
39,881 - -0.1
40,243 + +0.3
40,250 + +0.1
40,255 + +1.9
40,267 + MPMX26_03127 0.11 -1.3
40,349 + MPMX26_03127 0.30 +0.1
40,376 + MPMX26_03127 0.36 -0.2
40,412 + MPMX26_03127 0.45 -0.9
40,412 + MPMX26_03127 0.45 +1.5
40,454 + MPMX26_03127 0.55 -0.3
40,454 + MPMX26_03127 0.55 +0.5
40,520 + MPMX26_03127 0.70 +1.0
40,527 + MPMX26_03127 0.72 +0.1
40,527 + MPMX26_03127 0.72 +0.3
40,686 + -0.2
40,686 + -1.3
40,735 + MPMX26_03128 0.13 +0.1
40,735 + MPMX26_03128 0.13 +0.7
40,737 + MPMX26_03128 0.14 +0.9
40,831 + MPMX26_03128 0.43 -0.6
40,832 + MPMX26_03128 0.43 -0.1
40,832 + MPMX26_03128 0.43 -0.1
40,850 + MPMX26_03128 0.48 -2.5
40,850 + MPMX26_03128 0.48 +0.1
40,861 + MPMX26_03128 0.52 -0.1
40,886 + MPMX26_03128 0.60 +0.4
40,886 + MPMX26_03128 0.60 -0.8
40,888 + MPMX26_03128 0.60 +0.1
40,888 + MPMX26_03128 0.60 -0.0
40,888 + MPMX26_03128 0.60 +1.6
40,893 + MPMX26_03128 0.62 +0.6
40,954 + MPMX26_03128 0.81 -0.4
40,962 - MPMX26_03128 0.83 +1.7
40,971 + MPMX26_03128 0.86 -0.2
40,979 + MPMX26_03128 0.88 +0.4
40,979 + MPMX26_03128 0.88 +0.4
41,102 + MPMX26_03129 0.17 -0.7
41,111 + MPMX26_03129 0.19 -0.3
41,113 + MPMX26_03129 0.19 +1.0
41,125 + MPMX26_03129 0.22 +0.7
41,125 + MPMX26_03129 0.22 -1.8
41,168 + MPMX26_03129 0.31 +0.9
41,189 + MPMX26_03129 0.35 +0.1
41,225 + MPMX26_03129 0.43 -0.1
41,230 + MPMX26_03129 0.44 +0.9
41,235 + MPMX26_03129 0.45 +0.6
41,255 + MPMX26_03129 0.49 -0.3
41,255 + MPMX26_03129 0.49 +0.7
41,257 + MPMX26_03129 0.50 -0.3
41,257 + MPMX26_03129 0.50 -0.3
41,273 + MPMX26_03129 0.53 +2.5
41,315 + MPMX26_03129 0.62 -0.4
41,315 + MPMX26_03129 0.62 -0.8
41,315 + MPMX26_03129 0.62 +0.3
41,333 + MPMX26_03129 0.66 +0.1
41,563 + -0.5
41,563 + +0.6
41,563 + +0.8
41,571 - +2.1

Or see this region's nucleotide sequence