Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02694

Experiment: Urea (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02693 and MPMX26_02694 are separated by 53 nucleotidesMPMX26_02694 and MPMX26_02695 are separated by 180 nucleotidesMPMX26_02695 and MPMX26_02696 are separated by 18 nucleotides MPMX26_02693: MPMX26_02693 - Acyl-CoA dehydrogenase, at 2,787,247 to 2,788,419 _02693 MPMX26_02694: MPMX26_02694 - FAD-containing monooxygenase EthA, at 2,788,473 to 2,789,963 _02694 MPMX26_02695: MPMX26_02695 - 50S ribosomal protein L17, at 2,790,144 to 2,790,521 _02695 MPMX26_02696: MPMX26_02696 - DNA-directed RNA polymerase subunit alpha, at 2,790,540 to 2,791,547 _02696 Position (kb) 2788 2789 2790Strain fitness (log2 ratio) -1 0 1at 2788.505 kb on - strandat 2788.562 kb on - strandat 2788.581 kb on - strandat 2788.607 kb on - strandat 2788.608 kb on - strandat 2788.652 kb on - strand, within MPMX26_02694at 2788.652 kb on - strand, within MPMX26_02694at 2788.652 kb on - strand, within MPMX26_02694at 2788.652 kb on - strand, within MPMX26_02694at 2788.673 kb on - strand, within MPMX26_02694at 2788.680 kb on - strand, within MPMX26_02694at 2788.680 kb on - strand, within MPMX26_02694at 2788.685 kb on - strand, within MPMX26_02694at 2788.685 kb on - strand, within MPMX26_02694at 2788.685 kb on - strand, within MPMX26_02694at 2788.715 kb on - strand, within MPMX26_02694at 2788.758 kb on + strand, within MPMX26_02694at 2788.766 kb on - strand, within MPMX26_02694at 2788.806 kb on - strand, within MPMX26_02694at 2788.850 kb on - strand, within MPMX26_02694at 2788.850 kb on - strand, within MPMX26_02694at 2788.850 kb on - strand, within MPMX26_02694at 2788.850 kb on - strand, within MPMX26_02694at 2788.865 kb on - strand, within MPMX26_02694at 2788.886 kb on - strand, within MPMX26_02694at 2788.898 kb on - strand, within MPMX26_02694at 2788.908 kb on - strand, within MPMX26_02694at 2789.031 kb on - strand, within MPMX26_02694at 2789.042 kb on - strand, within MPMX26_02694at 2789.042 kb on - strand, within MPMX26_02694at 2789.042 kb on - strand, within MPMX26_02694at 2789.049 kb on - strand, within MPMX26_02694at 2789.061 kb on - strand, within MPMX26_02694at 2789.061 kb on - strand, within MPMX26_02694at 2789.061 kb on - strand, within MPMX26_02694at 2789.061 kb on - strand, within MPMX26_02694at 2789.061 kb on - strand, within MPMX26_02694at 2789.088 kb on - strand, within MPMX26_02694at 2789.109 kb on - strand, within MPMX26_02694at 2789.109 kb on - strand, within MPMX26_02694at 2789.109 kb on - strand, within MPMX26_02694at 2789.111 kb on - strand, within MPMX26_02694at 2789.351 kb on - strand, within MPMX26_02694at 2789.351 kb on - strand, within MPMX26_02694at 2789.351 kb on - strand, within MPMX26_02694at 2789.393 kb on - strand, within MPMX26_02694at 2789.393 kb on - strand, within MPMX26_02694at 2789.393 kb on - strand, within MPMX26_02694at 2789.393 kb on - strand, within MPMX26_02694at 2789.421 kb on - strand, within MPMX26_02694at 2789.448 kb on - strand, within MPMX26_02694at 2789.448 kb on - strand, within MPMX26_02694at 2789.493 kb on - strand, within MPMX26_02694at 2789.493 kb on - strand, within MPMX26_02694at 2789.493 kb on - strand, within MPMX26_02694at 2789.493 kb on - strand, within MPMX26_02694at 2789.504 kb on - strand, within MPMX26_02694at 2789.523 kb on - strand, within MPMX26_02694at 2789.578 kb on + strand, within MPMX26_02694at 2789.591 kb on - strand, within MPMX26_02694at 2789.591 kb on - strand, within MPMX26_02694at 2789.591 kb on - strand, within MPMX26_02694at 2789.598 kb on - strand, within MPMX26_02694at 2789.622 kb on - strand, within MPMX26_02694at 2789.622 kb on - strand, within MPMX26_02694at 2789.730 kb on - strand, within MPMX26_02694at 2789.844 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Urea (N)
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2,788,505 - -0.1
2,788,562 - +0.2
2,788,581 - -0.3
2,788,607 - -0.2
2,788,608 - +0.3
2,788,652 - MPMX26_02694 0.12 -0.3
2,788,652 - MPMX26_02694 0.12 -0.4
2,788,652 - MPMX26_02694 0.12 +0.8
2,788,652 - MPMX26_02694 0.12 -0.4
2,788,673 - MPMX26_02694 0.13 +0.3
2,788,680 - MPMX26_02694 0.14 -0.6
2,788,680 - MPMX26_02694 0.14 -0.2
2,788,685 - MPMX26_02694 0.14 -0.4
2,788,685 - MPMX26_02694 0.14 +0.2
2,788,685 - MPMX26_02694 0.14 -0.4
2,788,715 - MPMX26_02694 0.16 -0.4
2,788,758 + MPMX26_02694 0.19 -0.4
2,788,766 - MPMX26_02694 0.20 +0.3
2,788,806 - MPMX26_02694 0.22 -0.5
2,788,850 - MPMX26_02694 0.25 +0.3
2,788,850 - MPMX26_02694 0.25 -0.1
2,788,850 - MPMX26_02694 0.25 -0.8
2,788,850 - MPMX26_02694 0.25 +0.5
2,788,865 - MPMX26_02694 0.26 +0.5
2,788,886 - MPMX26_02694 0.28 +0.7
2,788,898 - MPMX26_02694 0.29 -0.6
2,788,908 - MPMX26_02694 0.29 +0.5
2,789,031 - MPMX26_02694 0.37 +0.4
2,789,042 - MPMX26_02694 0.38 -0.6
2,789,042 - MPMX26_02694 0.38 -0.6
2,789,042 - MPMX26_02694 0.38 -0.1
2,789,049 - MPMX26_02694 0.39 +0.4
2,789,061 - MPMX26_02694 0.39 -0.5
2,789,061 - MPMX26_02694 0.39 +0.1
2,789,061 - MPMX26_02694 0.39 +0.3
2,789,061 - MPMX26_02694 0.39 +0.2
2,789,061 - MPMX26_02694 0.39 +1.5
2,789,088 - MPMX26_02694 0.41 -0.0
2,789,109 - MPMX26_02694 0.43 +0.0
2,789,109 - MPMX26_02694 0.43 -0.3
2,789,109 - MPMX26_02694 0.43 -0.1
2,789,111 - MPMX26_02694 0.43 -0.2
2,789,351 - MPMX26_02694 0.59 -0.3
2,789,351 - MPMX26_02694 0.59 -1.5
2,789,351 - MPMX26_02694 0.59 -1.1
2,789,393 - MPMX26_02694 0.62 -0.6
2,789,393 - MPMX26_02694 0.62 -1.1
2,789,393 - MPMX26_02694 0.62 -0.4
2,789,393 - MPMX26_02694 0.62 +1.2
2,789,421 - MPMX26_02694 0.64 +0.1
2,789,448 - MPMX26_02694 0.65 -0.3
2,789,448 - MPMX26_02694 0.65 +0.7
2,789,493 - MPMX26_02694 0.68 +1.4
2,789,493 - MPMX26_02694 0.68 -0.3
2,789,493 - MPMX26_02694 0.68 -0.6
2,789,493 - MPMX26_02694 0.68 -0.3
2,789,504 - MPMX26_02694 0.69 -0.3
2,789,523 - MPMX26_02694 0.70 -0.0
2,789,578 + MPMX26_02694 0.74 -0.3
2,789,591 - MPMX26_02694 0.75 -0.5
2,789,591 - MPMX26_02694 0.75 +0.3
2,789,591 - MPMX26_02694 0.75 +0.2
2,789,598 - MPMX26_02694 0.75 +0.2
2,789,622 - MPMX26_02694 0.77 -0.5
2,789,622 - MPMX26_02694 0.77 +0.2
2,789,730 - MPMX26_02694 0.84 +0.9
2,789,844 - +0.0

Or see this region's nucleotide sequence