Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02616

Experiment: Urea (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02615 and MPMX26_02616 are separated by 255 nucleotidesMPMX26_02616 and MPMX26_02617 are separated by 265 nucleotides MPMX26_02615: MPMX26_02615 - hypothetical protein, at 2,709,250 to 2,710,245 _02615 MPMX26_02616: MPMX26_02616 - hypothetical protein, at 2,710,501 to 2,711,010 _02616 MPMX26_02617: MPMX26_02617 - Tryptophan synthase beta chain, at 2,711,276 to 2,712,505 _02617 Position (kb) 2710 2711 2712Strain fitness (log2 ratio) -7 -6 -5 -4 -3 -2 -1 0 1at 2709.735 kb on - strand, within MPMX26_02615at 2709.789 kb on - strand, within MPMX26_02615at 2709.870 kb on - strand, within MPMX26_02615at 2710.273 kb on - strandat 2710.692 kb on - strand, within MPMX26_02616at 2710.704 kb on - strand, within MPMX26_02616at 2710.704 kb on - strand, within MPMX26_02616at 2710.807 kb on - strand, within MPMX26_02616at 2710.869 kb on - strand, within MPMX26_02616at 2710.893 kb on + strand, within MPMX26_02616at 2711.236 kb on - strandat 2711.238 kb on - strandat 2711.298 kb on - strandat 2711.298 kb on - strandat 2711.298 kb on - strandat 2711.298 kb on - strandat 2711.311 kb on - strandat 2711.324 kb on - strandat 2711.324 kb on - strandat 2711.368 kb on - strandat 2711.386 kb on - strandat 2711.387 kb on - strandat 2711.387 kb on - strandat 2711.387 kb on - strandat 2711.391 kb on - strandat 2711.405 kb on - strand, within MPMX26_02617at 2711.411 kb on - strand, within MPMX26_02617at 2711.418 kb on - strand, within MPMX26_02617at 2711.423 kb on - strand, within MPMX26_02617at 2711.433 kb on - strand, within MPMX26_02617at 2711.453 kb on - strand, within MPMX26_02617at 2711.474 kb on - strand, within MPMX26_02617at 2711.482 kb on - strand, within MPMX26_02617at 2711.492 kb on - strand, within MPMX26_02617at 2711.518 kb on - strand, within MPMX26_02617at 2711.536 kb on - strand, within MPMX26_02617at 2711.547 kb on - strand, within MPMX26_02617at 2711.552 kb on - strand, within MPMX26_02617at 2711.558 kb on - strand, within MPMX26_02617at 2711.558 kb on - strand, within MPMX26_02617at 2711.563 kb on - strand, within MPMX26_02617at 2711.563 kb on - strand, within MPMX26_02617at 2711.563 kb on - strand, within MPMX26_02617at 2711.563 kb on - strand, within MPMX26_02617at 2711.563 kb on - strand, within MPMX26_02617at 2711.563 kb on - strand, within MPMX26_02617at 2711.563 kb on - strand, within MPMX26_02617at 2711.563 kb on - strand, within MPMX26_02617at 2711.563 kb on - strand, within MPMX26_02617at 2711.563 kb on - strand, within MPMX26_02617at 2711.563 kb on - strand, within MPMX26_02617at 2711.597 kb on - strand, within MPMX26_02617at 2711.607 kb on - strand, within MPMX26_02617at 2711.607 kb on - strand, within MPMX26_02617at 2711.607 kb on - strand, within MPMX26_02617at 2711.636 kb on - strand, within MPMX26_02617at 2711.636 kb on - strand, within MPMX26_02617at 2711.638 kb on - strand, within MPMX26_02617at 2711.641 kb on - strand, within MPMX26_02617at 2711.660 kb on - strand, within MPMX26_02617at 2711.671 kb on - strand, within MPMX26_02617at 2711.677 kb on - strand, within MPMX26_02617at 2711.695 kb on - strand, within MPMX26_02617at 2711.709 kb on - strand, within MPMX26_02617at 2711.709 kb on - strand, within MPMX26_02617at 2711.712 kb on - strand, within MPMX26_02617at 2711.714 kb on - strand, within MPMX26_02617at 2711.714 kb on - strand, within MPMX26_02617at 2711.714 kb on - strand, within MPMX26_02617at 2711.717 kb on - strand, within MPMX26_02617at 2711.781 kb on - strand, within MPMX26_02617at 2711.791 kb on - strand, within MPMX26_02617at 2711.813 kb on - strand, within MPMX26_02617at 2711.813 kb on - strand, within MPMX26_02617at 2711.813 kb on - strand, within MPMX26_02617at 2711.813 kb on - strand, within MPMX26_02617at 2711.842 kb on - strand, within MPMX26_02617at 2711.875 kb on - strand, within MPMX26_02617at 2711.880 kb on - strand, within MPMX26_02617at 2711.909 kb on - strand, within MPMX26_02617at 2711.960 kb on - strand, within MPMX26_02617at 2711.960 kb on - strand, within MPMX26_02617at 2711.960 kb on - strand, within MPMX26_02617at 2712.006 kb on - strand, within MPMX26_02617at 2712.006 kb on - strand, within MPMX26_02617

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Per-strain Table

Position Strand Gene LocusTag Fraction Urea (N)
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2,709,735 - MPMX26_02615 0.49 -0.0
2,709,789 - MPMX26_02615 0.54 -0.3
2,709,870 - MPMX26_02615 0.62 +0.1
2,710,273 - -0.5
2,710,692 - MPMX26_02616 0.37 -0.8
2,710,704 - MPMX26_02616 0.40 -0.6
2,710,704 - MPMX26_02616 0.40 -0.3
2,710,807 - MPMX26_02616 0.60 -0.4
2,710,869 - MPMX26_02616 0.72 +1.3
2,710,893 + MPMX26_02616 0.77 -0.5
2,711,236 - -0.2
2,711,238 - -0.7
2,711,298 - +0.4
2,711,298 - -0.0
2,711,298 - -0.4
2,711,298 - +0.2
2,711,311 - -0.6
2,711,324 - -3.7
2,711,324 - -4.0
2,711,368 - -5.6
2,711,386 - -4.6
2,711,387 - -3.9
2,711,387 - -5.5
2,711,387 - -4.8
2,711,391 - -3.1
2,711,405 - MPMX26_02617 0.10 -3.8
2,711,411 - MPMX26_02617 0.11 -5.5
2,711,418 - MPMX26_02617 0.12 -4.5
2,711,423 - MPMX26_02617 0.12 -1.8
2,711,433 - MPMX26_02617 0.13 -5.6
2,711,453 - MPMX26_02617 0.14 -5.7
2,711,474 - MPMX26_02617 0.16 -5.1
2,711,482 - MPMX26_02617 0.17 -5.1
2,711,492 - MPMX26_02617 0.18 -6.8
2,711,518 - MPMX26_02617 0.20 -5.4
2,711,536 - MPMX26_02617 0.21 -5.1
2,711,547 - MPMX26_02617 0.22 -2.6
2,711,552 - MPMX26_02617 0.22 -5.4
2,711,558 - MPMX26_02617 0.23 -2.8
2,711,558 - MPMX26_02617 0.23 -4.5
2,711,563 - MPMX26_02617 0.23 -5.6
2,711,563 - MPMX26_02617 0.23 -5.4
2,711,563 - MPMX26_02617 0.23 -3.6
2,711,563 - MPMX26_02617 0.23 -5.2
2,711,563 - MPMX26_02617 0.23 -3.4
2,711,563 - MPMX26_02617 0.23 -5.3
2,711,563 - MPMX26_02617 0.23 -4.8
2,711,563 - MPMX26_02617 0.23 -3.5
2,711,563 - MPMX26_02617 0.23 -5.6
2,711,563 - MPMX26_02617 0.23 -5.6
2,711,563 - MPMX26_02617 0.23 -4.6
2,711,597 - MPMX26_02617 0.26 -4.5
2,711,607 - MPMX26_02617 0.27 -4.8
2,711,607 - MPMX26_02617 0.27 -5.2
2,711,607 - MPMX26_02617 0.27 -5.6
2,711,636 - MPMX26_02617 0.29 -4.9
2,711,636 - MPMX26_02617 0.29 -5.4
2,711,638 - MPMX26_02617 0.29 -4.5
2,711,641 - MPMX26_02617 0.30 -4.7
2,711,660 - MPMX26_02617 0.31 -4.2
2,711,671 - MPMX26_02617 0.32 -5.8
2,711,677 - MPMX26_02617 0.33 -6.2
2,711,695 - MPMX26_02617 0.34 -3.2
2,711,709 - MPMX26_02617 0.35 -4.7
2,711,709 - MPMX26_02617 0.35 -3.8
2,711,712 - MPMX26_02617 0.35 -5.3
2,711,714 - MPMX26_02617 0.36 -5.2
2,711,714 - MPMX26_02617 0.36 -3.8
2,711,714 - MPMX26_02617 0.36 -5.2
2,711,717 - MPMX26_02617 0.36 -4.7
2,711,781 - MPMX26_02617 0.41 -5.3
2,711,791 - MPMX26_02617 0.42 -4.3
2,711,813 - MPMX26_02617 0.44 -4.9
2,711,813 - MPMX26_02617 0.44 -4.1
2,711,813 - MPMX26_02617 0.44 -5.1
2,711,813 - MPMX26_02617 0.44 -4.2
2,711,842 - MPMX26_02617 0.46 -4.0
2,711,875 - MPMX26_02617 0.49 -6.0
2,711,880 - MPMX26_02617 0.49 -4.3
2,711,909 - MPMX26_02617 0.51 -4.1
2,711,960 - MPMX26_02617 0.56 -5.3
2,711,960 - MPMX26_02617 0.56 -4.6
2,711,960 - MPMX26_02617 0.56 -4.2
2,712,006 - MPMX26_02617 0.59 -4.4
2,712,006 - MPMX26_02617 0.59 -4.5

Or see this region's nucleotide sequence