Experiment: phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EFB2_00414 and EFB2_00415 are separated by 58 nucleotides EFB2_00415 and EFB2_00416 are separated by 37 nucleotides EFB2_00416 and EFB2_00417 are separated by 28 nucleotides EFB2_00417 and EFB2_00418 are separated by 232 nucleotides
EFB2_00414: EFB2_00414 - Fe/S biogenesis protein NfuA, at 437,351 to 437,926
_00414
EFB2_00415: EFB2_00415 - Putative ribose-phosphate pyrophosphokinase, at 437,985 to 438,668
_00415
EFB2_00416: EFB2_00416 - Pimeloyl-[acyl-carrier protein] methyl ester esterase, at 438,706 to 439,476
_00416
EFB2_00417: EFB2_00417 - ISNCY family transposase ISRor2, at 439,505 to 440,098
_00417
EFB2_00418: EFB2_00418 - putative [Fe-S]-dependent transcriptional repressor FeoC, at 440,331 to 440,567
_00418
Position (kb) 438
439
440 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 437.712 kb on + strand, within EFB2_00414 at 437.712 kb on + strand, within EFB2_00414 at 437.713 kb on - strand, within EFB2_00414 at 437.723 kb on + strand, within EFB2_00414 at 437.723 kb on + strand, within EFB2_00414 at 437.724 kb on - strand, within EFB2_00414 at 437.724 kb on - strand, within EFB2_00414 at 437.724 kb on - strand, within EFB2_00414 at 437.736 kb on + strand, within EFB2_00414 at 437.736 kb on + strand, within EFB2_00414 at 437.736 kb on + strand, within EFB2_00414 at 437.736 kb on + strand, within EFB2_00414 at 437.736 kb on + strand, within EFB2_00414 at 437.736 kb on + strand, within EFB2_00414 at 437.736 kb on + strand, within EFB2_00414 at 437.737 kb on - strand, within EFB2_00414 at 437.737 kb on - strand, within EFB2_00414 at 437.799 kb on + strand, within EFB2_00414 at 437.800 kb on - strand, within EFB2_00414 at 437.800 kb on - strand, within EFB2_00414 at 437.837 kb on - strand, within EFB2_00414 at 437.847 kb on - strand, within EFB2_00414 at 437.917 kb on + strand at 437.926 kb on + strand at 437.926 kb on + strand at 437.926 kb on + strand at 437.926 kb on + strand at 437.926 kb on + strand at 437.926 kb on + strand at 437.927 kb on - strand at 437.927 kb on - strand at 437.927 kb on - strand at 437.927 kb on - strand at 437.927 kb on - strand at 437.927 kb on - strand at 437.927 kb on - strand at 437.927 kb on - strand at 437.927 kb on - strand at 437.927 kb on - strand at 437.929 kb on + strand at 437.929 kb on + strand at 437.929 kb on + strand at 437.929 kb on + strand at 437.929 kb on + strand at 437.930 kb on - strand at 437.930 kb on - strand at 437.930 kb on - strand at 437.930 kb on - strand at 437.930 kb on - strand at 437.930 kb on - strand at 437.930 kb on - strand at 437.930 kb on - strand at 437.930 kb on - strand at 437.937 kb on + strand at 437.938 kb on - strand at 437.940 kb on + strand at 437.940 kb on + strand at 437.940 kb on + strand at 437.940 kb on + strand at 437.940 kb on + strand at 437.940 kb on + strand at 437.941 kb on - strand at 437.941 kb on - strand at 437.941 kb on - strand at 437.941 kb on - strand at 437.949 kb on - strand at 437.954 kb on - strand at 437.954 kb on - strand at 437.961 kb on + strand at 437.961 kb on + strand at 437.961 kb on + strand at 437.961 kb on + strand at 437.961 kb on + strand at 437.961 kb on + strand at 437.961 kb on + strand at 437.962 kb on - strand at 437.962 kb on - strand at 437.962 kb on - strand at 437.962 kb on - strand at 437.962 kb on - strand at 437.962 kb on - strand at 437.963 kb on + strand at 437.963 kb on + strand at 437.964 kb on - strand at 437.964 kb on - strand at 437.964 kb on - strand at 437.964 kb on - strand at 437.964 kb on - strand at 437.967 kb on - strand at 437.967 kb on - strand at 437.967 kb on - strand at 437.986 kb on + strand at 437.986 kb on + strand at 437.986 kb on + strand at 437.986 kb on + strand at 437.987 kb on - strand at 437.987 kb on - strand at 437.987 kb on - strand at 437.987 kb on - strand at 437.987 kb on - strand at 437.987 kb on - strand at 437.987 kb on - strand at 437.987 kb on - strand at 438.036 kb on + strand at 438.037 kb on - strand at 438.037 kb on - strand at 438.065 kb on + strand, within EFB2_00415 at 438.066 kb on - strand, within EFB2_00415 at 438.066 kb on - strand, within EFB2_00415 at 438.066 kb on - strand, within EFB2_00415 at 438.066 kb on - strand, within EFB2_00415 at 438.077 kb on + strand, within EFB2_00415 at 438.102 kb on - strand, within EFB2_00415 at 438.102 kb on - strand, within EFB2_00415 at 438.234 kb on + strand, within EFB2_00415 at 438.234 kb on + strand, within EFB2_00415 at 438.235 kb on - strand, within EFB2_00415 at 438.235 kb on - strand, within EFB2_00415 at 438.235 kb on - strand, within EFB2_00415 at 438.235 kb on - strand, within EFB2_00415 at 438.275 kb on + strand, within EFB2_00415 at 438.276 kb on - strand, within EFB2_00415 at 438.276 kb on - strand, within EFB2_00415 at 438.306 kb on + strand, within EFB2_00415 at 438.363 kb on + strand, within EFB2_00415 at 438.364 kb on - strand, within EFB2_00415 at 438.364 kb on - strand, within EFB2_00415 at 438.375 kb on + strand, within EFB2_00415 at 438.375 kb on + strand, within EFB2_00415 at 438.375 kb on + strand, within EFB2_00415 at 438.375 kb on + strand, within EFB2_00415 at 438.376 kb on - strand, within EFB2_00415 at 438.376 kb on - strand, within EFB2_00415 at 438.376 kb on - strand, within EFB2_00415 at 438.378 kb on + strand, within EFB2_00415 at 438.378 kb on + strand, within EFB2_00415 at 438.378 kb on + strand, within EFB2_00415 at 438.378 kb on + strand, within EFB2_00415 at 438.379 kb on - strand, within EFB2_00415 at 438.425 kb on + strand, within EFB2_00415 at 438.425 kb on + strand, within EFB2_00415 at 438.425 kb on + strand, within EFB2_00415 at 438.425 kb on + strand, within EFB2_00415 at 438.425 kb on + strand, within EFB2_00415 at 438.426 kb on - strand, within EFB2_00415 at 438.426 kb on - strand, within EFB2_00415 at 438.426 kb on - strand, within EFB2_00415 at 438.426 kb on - strand, within EFB2_00415 at 438.447 kb on + strand, within EFB2_00415 at 438.447 kb on + strand, within EFB2_00415 at 438.447 kb on + strand, within EFB2_00415 at 438.448 kb on - strand, within EFB2_00415 at 438.448 kb on - strand, within EFB2_00415 at 438.448 kb on - strand, within EFB2_00415 at 438.448 kb on - strand, within EFB2_00415 at 438.448 kb on - strand, within EFB2_00415 at 438.460 kb on + strand, within EFB2_00415 at 438.461 kb on - strand, within EFB2_00415 at 438.561 kb on + strand, within EFB2_00415 at 438.562 kb on - strand, within EFB2_00415 at 438.562 kb on - strand, within EFB2_00415 at 438.562 kb on - strand, within EFB2_00415 at 438.569 kb on + strand, within EFB2_00415 at 438.569 kb on + strand, within EFB2_00415 at 438.569 kb on + strand, within EFB2_00415 at 438.569 kb on + strand, within EFB2_00415 at 438.569 kb on + strand, within EFB2_00415 at 438.569 kb on + strand, within EFB2_00415 at 438.569 kb on + strand, within EFB2_00415 at 438.569 kb on + strand, within EFB2_00415 at 438.570 kb on - strand, within EFB2_00415 at 438.570 kb on - strand, within EFB2_00415 at 438.570 kb on - strand, within EFB2_00415 at 438.570 kb on - strand, within EFB2_00415 at 438.570 kb on - strand, within EFB2_00415 at 438.575 kb on + strand, within EFB2_00415 at 438.576 kb on - strand, within EFB2_00415 at 438.618 kb on + strand at 438.618 kb on + strand at 438.618 kb on + strand at 438.618 kb on + strand at 438.619 kb on - strand at 438.619 kb on - strand at 438.619 kb on - strand at 438.619 kb on - strand at 438.619 kb on - strand at 438.619 kb on - strand at 438.639 kb on + strand at 438.640 kb on - strand at 438.648 kb on + strand at 438.648 kb on + strand at 438.648 kb on + strand at 438.648 kb on + strand at 438.648 kb on + strand at 438.648 kb on + strand at 438.657 kb on + strand at 438.663 kb on + strand at 438.663 kb on + strand at 438.663 kb on + strand at 438.663 kb on + strand at 438.664 kb on - strand at 438.664 kb on - strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.668 kb on + strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.669 kb on - strand at 438.682 kb on + strand at 438.682 kb on + strand at 438.682 kb on + strand at 438.682 kb on + strand at 438.682 kb on + strand at 438.682 kb on + strand at 438.683 kb on - strand at 438.683 kb on - strand at 438.683 kb on - strand at 438.683 kb on - strand at 438.683 kb on - strand at 438.683 kb on - strand at 438.683 kb on - strand at 438.683 kb on - strand at 438.683 kb on - strand at 438.683 kb on - strand at 438.683 kb on - strand at 438.683 kb on - strand at 438.683 kb on - strand at 438.683 kb on - strand at 438.683 kb on - strand at 438.686 kb on + strand at 438.686 kb on + strand at 438.687 kb on - strand at 438.687 kb on - strand at 438.687 kb on - strand at 438.700 kb on + strand at 438.711 kb on + strand at 438.711 kb on + strand at 438.711 kb on + strand at 438.711 kb on + strand at 438.712 kb on - strand at 438.712 kb on - strand at 438.712 kb on - strand at 438.712 kb on - strand at 438.712 kb on - strand at 438.813 kb on + strand, within EFB2_00416 at 438.813 kb on + strand, within EFB2_00416 at 438.813 kb on + strand, within EFB2_00416 at 438.813 kb on + strand, within EFB2_00416 at 438.813 kb on + strand, within EFB2_00416 at 438.813 kb on + strand, within EFB2_00416 at 438.813 kb on + strand, within EFB2_00416 at 438.813 kb on + strand, within EFB2_00416 at 438.813 kb on + strand, within EFB2_00416 at 438.813 kb on + strand, within EFB2_00416 at 438.813 kb on + strand, within EFB2_00416 at 438.813 kb on + strand, within EFB2_00416 at 438.814 kb on - strand, within EFB2_00416 at 438.814 kb on - strand, within EFB2_00416 at 438.814 kb on - strand, within EFB2_00416 at 438.814 kb on - strand, within EFB2_00416 at 438.814 kb on - strand, within EFB2_00416 at 438.814 kb on - strand, within EFB2_00416 at 438.814 kb on - strand, within EFB2_00416 at 438.814 kb on - strand, within EFB2_00416 at 438.814 kb on - strand, within EFB2_00416 at 438.814 kb on - strand, within EFB2_00416 at 438.814 kb on - strand, within EFB2_00416 at 438.814 kb on - strand, within EFB2_00416 at 438.814 kb on - strand, within EFB2_00416 at 438.814 kb on - strand, within EFB2_00416 at 438.814 kb on - strand, within EFB2_00416 at 438.825 kb on + strand, within EFB2_00416 at 438.825 kb on + strand, within EFB2_00416 at 438.826 kb on - strand, within EFB2_00416 at 438.862 kb on - strand, within EFB2_00416 at 438.881 kb on + strand, within EFB2_00416 at 438.882 kb on - strand, within EFB2_00416 at 438.895 kb on - strand, within EFB2_00416 at 438.927 kb on + strand, within EFB2_00416 at 438.928 kb on - strand, within EFB2_00416 at 439.038 kb on + strand, within EFB2_00416 at 439.038 kb on + strand, within EFB2_00416 at 439.039 kb on - strand, within EFB2_00416 at 439.039 kb on - strand, within EFB2_00416 at 439.039 kb on - strand, within EFB2_00416 at 439.039 kb on - strand, within EFB2_00416 at 439.065 kb on - strand, within EFB2_00416 at 439.119 kb on + strand, within EFB2_00416 at 439.119 kb on + strand, within EFB2_00416 at 439.119 kb on + strand, within EFB2_00416 at 439.119 kb on + strand, within EFB2_00416 at 439.119 kb on + strand, within EFB2_00416 at 439.119 kb on + strand, within EFB2_00416 at 439.119 kb on + strand, within EFB2_00416 at 439.119 kb on + strand, within EFB2_00416 at 439.119 kb on + strand, within EFB2_00416 at 439.119 kb on + strand, within EFB2_00416 at 439.120 kb on - strand, within EFB2_00416 at 439.120 kb on - strand, within EFB2_00416 at 439.120 kb on - strand, within EFB2_00416 at 439.120 kb on - strand, within EFB2_00416 at 439.120 kb on - strand, within EFB2_00416 at 439.120 kb on - strand, within EFB2_00416 at 439.142 kb on + strand, within EFB2_00416 at 439.233 kb on + strand, within EFB2_00416 at 439.233 kb on + strand, within EFB2_00416 at 439.234 kb on - strand, within EFB2_00416 at 439.234 kb on - strand, within EFB2_00416 at 439.234 kb on - strand, within EFB2_00416 at 439.234 kb on - strand, within EFB2_00416 at 439.234 kb on - strand, within EFB2_00416 at 439.312 kb on + strand, within EFB2_00416 at 439.312 kb on + strand, within EFB2_00416 at 439.312 kb on + strand, within EFB2_00416 at 439.312 kb on + strand, within EFB2_00416 at 439.312 kb on + strand, within EFB2_00416 at 439.312 kb on + strand, within EFB2_00416 at 439.312 kb on + strand, within EFB2_00416 at 439.312 kb on + strand, within EFB2_00416 at 439.312 kb on + strand, within EFB2_00416 at 439.312 kb on + strand, within EFB2_00416 at 439.312 kb on + strand, within EFB2_00416 at 439.312 kb on + strand, within EFB2_00416 at 439.312 kb on + strand, within EFB2_00416 at 439.312 kb on + strand, within EFB2_00416 at 439.312 kb on + strand, within EFB2_00416 at 439.312 kb on + strand, within EFB2_00416 at 439.312 kb on + strand, within EFB2_00416 at 439.312 kb on + strand, within EFB2_00416 at 439.312 kb on + strand, within EFB2_00416 at 439.312 kb on + strand, within EFB2_00416 at 439.312 kb on + strand, within EFB2_00416 at 439.312 kb on + strand, within EFB2_00416 at 439.312 kb on + strand, within EFB2_00416 at 439.312 kb on + strand, within EFB2_00416 at 439.312 kb on + strand, within EFB2_00416 at 439.312 kb on + strand, within EFB2_00416 at 439.312 kb on + strand, within EFB2_00416 at 439.312 kb on + strand, within EFB2_00416 at 439.312 kb on + strand, within EFB2_00416 at 439.312 kb on + strand, within EFB2_00416 at 439.312 kb on + strand, within EFB2_00416 at 439.312 kb on + strand, within EFB2_00416 at 439.312 kb on + strand, within EFB2_00416 at 439.312 kb on + strand, within EFB2_00416 at 439.312 kb on + strand, within EFB2_00416 at 439.312 kb on + strand, within EFB2_00416 at 439.312 kb on + strand, within EFB2_00416 at 439.312 kb on + strand, within EFB2_00416 at 439.312 kb on + strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.313 kb on - strand, within EFB2_00416 at 439.314 kb on - strand, within EFB2_00416 at 439.318 kb on + strand, within EFB2_00416 at 439.319 kb on - strand, within EFB2_00416 at 439.319 kb on - strand, within EFB2_00416 at 439.362 kb on + strand, within EFB2_00416 at 439.387 kb on + strand, within EFB2_00416 at 439.387 kb on + strand, within EFB2_00416 at 439.387 kb on + strand, within EFB2_00416 at 439.387 kb on + strand, within EFB2_00416 at 439.387 kb on + strand, within EFB2_00416 at 439.387 kb on + strand, within EFB2_00416 at 439.387 kb on + strand, within EFB2_00416 at 439.387 kb on + strand, within EFB2_00416 at 439.387 kb on + strand, within EFB2_00416 at 439.387 kb on + strand, within EFB2_00416 at 439.387 kb on + strand, within EFB2_00416 at 439.387 kb on + strand, within EFB2_00416 at 439.387 kb on + strand, within EFB2_00416 at 439.387 kb on + strand, within EFB2_00416 at 439.387 kb on + strand, within EFB2_00416 at 439.387 kb on + strand, within EFB2_00416 at 439.387 kb on + strand, within EFB2_00416 at 439.387 kb on + strand, within EFB2_00416 at 439.387 kb on + strand, within EFB2_00416 at 439.387 kb on + strand, within EFB2_00416 at 439.387 kb on + strand, within EFB2_00416 at 439.387 kb on + strand, within EFB2_00416 at 439.387 kb on + strand, within EFB2_00416 at 439.387 kb on + strand, within EFB2_00416 at 439.387 kb on + strand, within EFB2_00416 at 439.387 kb on + strand, within EFB2_00416 at 439.387 kb on + strand, within EFB2_00416 at 439.387 kb on + strand, within EFB2_00416 at 439.387 kb on + strand, within EFB2_00416 at 439.387 kb on + strand, within EFB2_00416 at 439.387 kb on + strand, within EFB2_00416 at 439.387 kb on + strand, within EFB2_00416 at 439.387 kb on + strand, within EFB2_00416 at 439.387 kb on + strand, within EFB2_00416 at 439.387 kb on + strand, within EFB2_00416 at 439.388 kb on - strand, within EFB2_00416 at 439.388 kb on - strand, within EFB2_00416 at 439.388 kb on - strand, within EFB2_00416 at 439.388 kb on - strand, within EFB2_00416 at 439.388 kb on - strand, within EFB2_00416 at 439.388 kb on - strand, within EFB2_00416 at 439.388 kb on - strand, within EFB2_00416 at 439.388 kb on - strand, within EFB2_00416 at 439.388 kb on - strand, within EFB2_00416 at 439.388 kb on - strand, within EFB2_00416 at 439.388 kb on - strand, within EFB2_00416 at 439.388 kb on - strand, within EFB2_00416 at 439.388 kb on - strand, within EFB2_00416 at 439.388 kb on - strand, within EFB2_00416 at 439.388 kb on - strand, within EFB2_00416 at 439.388 kb on - strand, within EFB2_00416 at 439.388 kb on - strand, within EFB2_00416 at 439.388 kb on - strand, within EFB2_00416 at 439.388 kb on - strand, within EFB2_00416 at 439.388 kb on - strand, within EFB2_00416 at 439.388 kb on - strand, within EFB2_00416 at 439.388 kb on - strand, within EFB2_00416 at 439.388 kb on - strand, within EFB2_00416 at 439.388 kb on - strand, within EFB2_00416 at 439.388 kb on - strand, within EFB2_00416 at 439.388 kb on - strand, within EFB2_00416 at 439.388 kb on - strand, within EFB2_00416 at 439.388 kb on - strand, within EFB2_00416 at 439.388 kb on - strand, within EFB2_00416 at 439.388 kb on - strand, within EFB2_00416 at 439.388 kb on - strand, within EFB2_00416 at 439.388 kb on - strand, within EFB2_00416 at 439.388 kb on - strand, within EFB2_00416 at 439.388 kb on - strand, within EFB2_00416 at 439.388 kb on - strand, within EFB2_00416 at 439.388 kb on - strand, within EFB2_00416 at 439.388 kb on - strand, within EFB2_00416 at 439.388 kb on - strand, within EFB2_00416 at 439.388 kb on - strand, within EFB2_00416 at 439.388 kb on - strand, within EFB2_00416 at 439.388 kb on - strand, within EFB2_00416 at 439.388 kb on - strand, within EFB2_00416 at 439.388 kb on - strand, within EFB2_00416 at 439.388 kb on - strand, within EFB2_00416 at 439.388 kb on - strand, within EFB2_00416 at 439.388 kb on - strand, within EFB2_00416 at 439.388 kb on - strand, within EFB2_00416 at 439.388 kb on - strand, within EFB2_00416 at 439.388 kb on - strand, within EFB2_00416 at 439.388 kb on - strand, within EFB2_00416 at 439.389 kb on + strand, within EFB2_00416 at 439.389 kb on + strand, within EFB2_00416 at 439.389 kb on + strand, within EFB2_00416 at 439.389 kb on + strand, within EFB2_00416 at 439.389 kb on + strand, within EFB2_00416 at 439.389 kb on + strand, within EFB2_00416 at 439.389 kb on + strand, within EFB2_00416 at 439.389 kb on + strand, within EFB2_00416 at 439.389 kb on + strand, within EFB2_00416 at 439.389 kb on + strand, within EFB2_00416 at 439.389 kb on + strand, within EFB2_00416 at 439.389 kb on + strand, within EFB2_00416 at 439.389 kb on + strand, within EFB2_00416 at 439.389 kb on + strand, within EFB2_00416 at 439.389 kb on + strand, within EFB2_00416 at 439.389 kb on + strand, within EFB2_00416 at 439.389 kb on + strand, within EFB2_00416 at 439.389 kb on + strand, within EFB2_00416 at 439.389 kb on + strand, within EFB2_00416 at 439.390 kb on - strand, within EFB2_00416 at 439.390 kb on - strand, within EFB2_00416 at 439.390 kb on - strand, within EFB2_00416 at 439.390 kb on - strand, within EFB2_00416 at 439.390 kb on - strand, within EFB2_00416 at 439.390 kb on - strand, within EFB2_00416 at 439.390 kb on - strand, within EFB2_00416 at 439.390 kb on - strand, within EFB2_00416 at 439.390 kb on - strand, within EFB2_00416 at 439.390 kb on - strand, within EFB2_00416 at 439.390 kb on - strand, within EFB2_00416 at 439.419 kb on + strand at 439.419 kb on + strand at 439.419 kb on + strand at 439.419 kb on + strand at 439.419 kb on + strand at 439.419 kb on + strand at 439.420 kb on - strand at 439.420 kb on - strand at 439.420 kb on - strand at 439.474 kb on + strand at 439.474 kb on + strand at 439.474 kb on + strand at 439.474 kb on + strand at 439.474 kb on + strand at 439.474 kb on + strand at 439.474 kb on + strand at 439.474 kb on + strand at 439.474 kb on + strand at 439.474 kb on + strand at 439.474 kb on + strand at 439.474 kb on + strand at 439.474 kb on + strand at 439.474 kb on + strand at 439.474 kb on + strand at 439.474 kb on + strand at 439.474 kb on + strand at 439.474 kb on + strand at 439.475 kb on - strand at 439.475 kb on - strand at 439.475 kb on - strand at 439.475 kb on - strand at 439.475 kb on - strand at 439.475 kb on - strand at 439.475 kb on - strand at 439.475 kb on - strand at 439.475 kb on - strand at 439.475 kb on - strand at 439.475 kb on - strand at 439.475 kb on - strand at 439.475 kb on - strand at 439.506 kb on + strand at 439.506 kb on + strand at 439.547 kb on - strand at 439.590 kb on - strand, within EFB2_00417 at 439.598 kb on + strand, within EFB2_00417 at 439.598 kb on + strand, within EFB2_00417 at 439.598 kb on + strand, within EFB2_00417 at 439.598 kb on + strand, within EFB2_00417 at 439.598 kb on + strand, within EFB2_00417 at 439.598 kb on + strand, within EFB2_00417 at 439.599 kb on - strand, within EFB2_00417 at 439.599 kb on - strand, within EFB2_00417 at 439.599 kb on - strand, within EFB2_00417 at 439.599 kb on - strand, within EFB2_00417 at 439.600 kb on + strand, within EFB2_00417 at 439.600 kb on + strand, within EFB2_00417 at 439.600 kb on + strand, within EFB2_00417 at 439.600 kb on + strand, within EFB2_00417 at 439.600 kb on + strand, within EFB2_00417 at 439.600 kb on + strand, within EFB2_00417 at 439.600 kb on + strand, within EFB2_00417 at 439.600 kb on + strand, within EFB2_00417 at 439.600 kb on + strand, within EFB2_00417 at 439.600 kb on + strand, within EFB2_00417 at 439.600 kb on + strand, within EFB2_00417 at 439.600 kb on + strand, within EFB2_00417 at 439.600 kb on + strand, within EFB2_00417 at 439.600 kb on + strand, within EFB2_00417 at 439.600 kb on + strand, within EFB2_00417 at 439.600 kb on + strand, within EFB2_00417 at 439.600 kb on + strand, within EFB2_00417 at 439.600 kb on + strand, within EFB2_00417 at 439.600 kb on + strand, within EFB2_00417 at 439.600 kb on + strand, within EFB2_00417 at 439.600 kb on + strand, within EFB2_00417 at 439.600 kb on + strand, within EFB2_00417 at 439.600 kb on + strand, within EFB2_00417 at 439.600 kb on + strand, within EFB2_00417 at 439.600 kb on + strand, within EFB2_00417 at 439.600 kb on + strand, within EFB2_00417 at 439.600 kb on + strand, within EFB2_00417 at 439.600 kb on + strand, within EFB2_00417 at 439.600 kb on + strand, within EFB2_00417 at 439.601 kb on - strand, within EFB2_00417 at 439.601 kb on - strand, within EFB2_00417 at 439.601 kb on - strand, within EFB2_00417 at 439.601 kb on - strand, within EFB2_00417 at 439.601 kb on - strand, within EFB2_00417 at 439.601 kb on - strand, within EFB2_00417 at 439.601 kb on - strand, within EFB2_00417 at 439.601 kb on - strand, within EFB2_00417 at 439.601 kb on - strand, within EFB2_00417 at 439.601 kb on - strand, within EFB2_00417 at 439.601 kb on - strand, within EFB2_00417 at 439.601 kb on - strand, within EFB2_00417 at 439.601 kb on - strand, within EFB2_00417 at 439.601 kb on - strand, within EFB2_00417 at 439.601 kb on - strand, within EFB2_00417 at 439.601 kb on - strand, within EFB2_00417 at 439.601 kb on - strand, within EFB2_00417 at 439.601 kb on - strand, within EFB2_00417 at 439.601 kb on - strand, within EFB2_00417 at 439.648 kb on + strand, within EFB2_00417 at 439.648 kb on + strand, within EFB2_00417 at 439.648 kb on + strand, within EFB2_00417 at 439.648 kb on + strand, within EFB2_00417 at 439.648 kb on + strand, within EFB2_00417 at 439.649 kb on - strand, within EFB2_00417 at 439.649 kb on - strand, within EFB2_00417 at 439.649 kb on - strand, within EFB2_00417 at 439.649 kb on - strand, within EFB2_00417 at 439.649 kb on - strand, within EFB2_00417 at 439.649 kb on - strand, within EFB2_00417 at 439.649 kb on - strand, within EFB2_00417 at 439.649 kb on - strand, within EFB2_00417 at 439.655 kb on + strand, within EFB2_00417 at 439.655 kb on + strand, within EFB2_00417 at 439.655 kb on + strand, within EFB2_00417 at 439.656 kb on - strand, within EFB2_00417 at 439.656 kb on - strand, within EFB2_00417 at 439.656 kb on - strand, within EFB2_00417 at 439.656 kb on - strand, within EFB2_00417 at 439.736 kb on + strand, within EFB2_00417 at 439.736 kb on + strand, within EFB2_00417 at 439.736 kb on + strand, within EFB2_00417 at 439.736 kb on + strand, within EFB2_00417 at 439.736 kb on + strand, within EFB2_00417 at 439.736 kb on + strand, within EFB2_00417 at 439.736 kb on + strand, within EFB2_00417 at 439.737 kb on - strand, within EFB2_00417 at 439.737 kb on - strand, within EFB2_00417 at 439.737 kb on - strand, within EFB2_00417 at 439.737 kb on - strand, within EFB2_00417 at 439.740 kb on + strand, within EFB2_00417 at 439.740 kb on + strand, within EFB2_00417 at 439.740 kb on + strand, within EFB2_00417 at 439.740 kb on + strand, within EFB2_00417 at 439.740 kb on + strand, within EFB2_00417 at 439.740 kb on + strand, within EFB2_00417 at 439.740 kb on + strand, within EFB2_00417 at 439.740 kb on + strand, within EFB2_00417 at 439.741 kb on - strand, within EFB2_00417 at 439.741 kb on - strand, within EFB2_00417 at 439.741 kb on - strand, within EFB2_00417 at 439.741 kb on - strand, within EFB2_00417 at 439.741 kb on - strand, within EFB2_00417 at 439.741 kb on - strand, within EFB2_00417 at 439.741 kb on - strand, within EFB2_00417 at 439.741 kb on - strand, within EFB2_00417 at 439.741 kb on - strand, within EFB2_00417 at 439.741 kb on - strand, within EFB2_00417 at 439.744 kb on + strand, within EFB2_00417 at 439.745 kb on - strand, within EFB2_00417 at 439.771 kb on + strand, within EFB2_00417 at 439.776 kb on + strand, within EFB2_00417 at 439.777 kb on - strand, within EFB2_00417 at 439.777 kb on - strand, within EFB2_00417 at 439.777 kb on - strand, within EFB2_00417 at 439.783 kb on + strand, within EFB2_00417 at 439.784 kb on - strand, within EFB2_00417 at 439.787 kb on + strand, within EFB2_00417 at 439.787 kb on + strand, within EFB2_00417 at 439.787 kb on + strand, within EFB2_00417 at 439.787 kb on + strand, within EFB2_00417 at 439.787 kb on + strand, within EFB2_00417 at 439.787 kb on + strand, within EFB2_00417 at 439.787 kb on + strand, within EFB2_00417 at 439.787 kb on + strand, within EFB2_00417 at 439.787 kb on + strand, within EFB2_00417 at 439.787 kb on + strand, within EFB2_00417 at 439.787 kb on + strand, within EFB2_00417 at 439.788 kb on - strand, within EFB2_00417 at 439.788 kb on - strand, within EFB2_00417 at 439.788 kb on - strand, within EFB2_00417 at 439.788 kb on - strand, within EFB2_00417 at 439.788 kb on - strand, within EFB2_00417 at 439.788 kb on - strand, within EFB2_00417 at 439.788 kb on - strand, within EFB2_00417 at 439.788 kb on - strand, within EFB2_00417 at 439.788 kb on - strand, within EFB2_00417 at 439.788 kb on - strand, within EFB2_00417 at 439.788 kb on - strand, within EFB2_00417 at 439.788 kb on - strand, within EFB2_00417 at 439.788 kb on - strand, within EFB2_00417 at 439.788 kb on - strand, within EFB2_00417 at 439.790 kb on + strand, within EFB2_00417 at 439.790 kb on + strand, within EFB2_00417 at 439.791 kb on - strand, within EFB2_00417 at 439.791 kb on - strand, within EFB2_00417 at 439.791 kb on - strand, within EFB2_00417 at 439.791 kb on - strand, within EFB2_00417 at 439.791 kb on - strand, within EFB2_00417 at 439.791 kb on - strand, within EFB2_00417 at 439.791 kb on - strand, within EFB2_00417 at 439.791 kb on - strand, within EFB2_00417 at 439.791 kb on - strand, within EFB2_00417 at 439.808 kb on + strand, within EFB2_00417 at 439.837 kb on + strand, within EFB2_00417 at 439.837 kb on + strand, within EFB2_00417 at 439.838 kb on - strand, within EFB2_00417 at 439.838 kb on - strand, within EFB2_00417 at 439.867 kb on + strand, within EFB2_00417 at 439.867 kb on + strand, within EFB2_00417 at 439.867 kb on + strand, within EFB2_00417 at 439.867 kb on + strand, within EFB2_00417 at 439.867 kb on + strand, within EFB2_00417 at 439.868 kb on - strand, within EFB2_00417 at 439.868 kb on - strand, within EFB2_00417 at 439.868 kb on - strand, within EFB2_00417 at 439.868 kb on - strand, within EFB2_00417 at 439.868 kb on - strand, within EFB2_00417 at 439.868 kb on - strand, within EFB2_00417 at 439.868 kb on - strand, within EFB2_00417 at 439.868 kb on - strand, within EFB2_00417 at 439.935 kb on + strand, within EFB2_00417 at 439.935 kb on + strand, within EFB2_00417 at 439.935 kb on + strand, within EFB2_00417 at 439.935 kb on + strand, within EFB2_00417 at 439.935 kb on + strand, within EFB2_00417 at 439.935 kb on + strand, within EFB2_00417 at 439.935 kb on + strand, within EFB2_00417 at 439.935 kb on + strand, within EFB2_00417 at 439.936 kb on - strand, within EFB2_00417 at 439.936 kb on - strand, within EFB2_00417 at 439.936 kb on - strand, within EFB2_00417 at 439.936 kb on - strand, within EFB2_00417 at 439.936 kb on - strand, within EFB2_00417 at 439.936 kb on - strand, within EFB2_00417 at 439.936 kb on - strand, within EFB2_00417 at 439.936 kb on - strand, within EFB2_00417 at 439.936 kb on - strand, within EFB2_00417 at 439.936 kb on - strand, within EFB2_00417 at 439.936 kb on - strand, within EFB2_00417 at 439.936 kb on - strand, within EFB2_00417 at 439.936 kb on - strand, within EFB2_00417 at 439.936 kb on - strand, within EFB2_00417 at 439.996 kb on - strand, within EFB2_00417 at 439.996 kb on - strand, within EFB2_00417 at 440.009 kb on - strand, within EFB2_00417 at 440.016 kb on + strand, within EFB2_00417 at 440.017 kb on - strand, within EFB2_00417 at 440.017 kb on - strand, within EFB2_00417 at 440.017 kb on - strand, within EFB2_00417 at 440.052 kb on + strand at 440.147 kb on + strand at 440.147 kb on + strand at 440.147 kb on + strand at 440.147 kb on + strand at 440.148 kb on - strand at 440.148 kb on - strand at 440.148 kb on - strand at 440.166 kb on + strand at 440.166 kb on + strand at 440.167 kb on - strand at 440.231 kb on + strand at 440.231 kb on + strand at 440.231 kb on + strand at 440.231 kb on + strand at 440.231 kb on + strand at 440.231 kb on + strand at 440.231 kb on + strand at 440.231 kb on + strand at 440.231 kb on + strand at 440.231 kb on + strand at 440.231 kb on + strand at 440.231 kb on + strand at 440.231 kb on + strand at 440.231 kb on + strand at 440.231 kb on + strand at 440.231 kb on + strand at 440.231 kb on + strand at 440.231 kb on + strand at 440.231 kb on + strand at 440.231 kb on + strand at 440.231 kb on + strand at 440.232 kb on - strand at 440.232 kb on - strand at 440.232 kb on - strand at 440.232 kb on - strand at 440.232 kb on - strand at 440.232 kb on - strand at 440.232 kb on - strand at 440.232 kb on - strand at 440.232 kb on - strand at 440.232 kb on - strand at 440.232 kb on - strand at 440.232 kb on - strand at 440.232 kb on - strand at 440.298 kb on + strand at 440.384 kb on + strand, within EFB2_00418 at 440.384 kb on + strand, within EFB2_00418 at 440.384 kb on + strand, within EFB2_00418 at 440.385 kb on - strand, within EFB2_00418 at 440.385 kb on - strand, within EFB2_00418 at 440.385 kb on - strand, within EFB2_00418 at 440.442 kb on - strand, within EFB2_00418 at 440.448 kb on + strand, within EFB2_00418 at 440.449 kb on - strand, within EFB2_00418 at 440.449 kb on - strand, within EFB2_00418 at 440.449 kb on - strand, within EFB2_00418 at 440.449 kb on - strand, within EFB2_00418 at 440.449 kb on - strand, within EFB2_00418 at 440.449 kb on - strand, within EFB2_00418 at 440.468 kb on + strand, within EFB2_00418
Per-strain Table
Position Strand Gene LocusTag Fraction phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) remove 437,712 + EFB2_00414 0.63 +0.3 437,712 + EFB2_00414 0.63 -1.7 437,713 - EFB2_00414 0.63 +0.4 437,723 + EFB2_00414 0.65 -3.5 437,723 + EFB2_00414 0.65 -1.7 437,724 - EFB2_00414 0.65 -1.3 437,724 - EFB2_00414 0.65 -3.3 437,724 - EFB2_00414 0.65 -0.9 437,736 + EFB2_00414 0.67 +0.3 437,736 + EFB2_00414 0.67 -2.0 437,736 + EFB2_00414 0.67 -1.8 437,736 + EFB2_00414 0.67 +0.9 437,736 + EFB2_00414 0.67 +1.6 437,736 + EFB2_00414 0.67 +0.3 437,736 + EFB2_00414 0.67 +0.2 437,737 - EFB2_00414 0.67 -0.6 437,737 - EFB2_00414 0.67 -1.9 437,799 + EFB2_00414 0.78 +2.6 437,800 - EFB2_00414 0.78 +1.3 437,800 - EFB2_00414 0.78 -0.4 437,837 - EFB2_00414 0.84 -0.6 437,847 - EFB2_00414 0.86 +1.1 437,917 + +0.3 437,926 + +0.0 437,926 + +2.2 437,926 + -0.4 437,926 + -1.7 437,926 + +0.5 437,926 + -0.8 437,927 - -2.3 437,927 - 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EFB2_00417 0.73 +0.6 439,936 - EFB2_00417 0.73 -0.9 439,936 - EFB2_00417 0.73 +0.0 439,936 - EFB2_00417 0.73 +0.2 439,936 - EFB2_00417 0.73 +1.9 439,936 - EFB2_00417 0.73 -0.0 439,936 - EFB2_00417 0.73 +0.8 439,936 - EFB2_00417 0.73 +0.8 439,936 - EFB2_00417 0.73 +0.5 439,936 - EFB2_00417 0.73 +0.6 439,936 - EFB2_00417 0.73 -0.0 439,936 - EFB2_00417 0.73 -0.1 439,936 - EFB2_00417 0.73 +3.1 439,936 - EFB2_00417 0.73 +0.5 439,996 - EFB2_00417 0.83 -0.4 439,996 - EFB2_00417 0.83 +1.1 440,009 - EFB2_00417 0.85 -0.6 440,016 + EFB2_00417 0.86 +0.2 440,017 - EFB2_00417 0.86 +0.5 440,017 - EFB2_00417 0.86 +1.5 440,017 - EFB2_00417 0.86 -1.9 440,052 + -0.7 440,147 + -2.6 440,147 + +1.5 440,147 + -0.7 440,147 + +0.4 440,148 - -0.0 440,148 - -0.2 440,148 - +0.3 440,166 + +1.4 440,166 + +1.4 440,167 - +0.4 440,231 + -0.3 440,231 + +1.9 440,231 + +0.2 440,231 + +1.9 440,231 + +0.0 440,231 + +0.8 440,231 + -1.1 440,231 + +1.8 440,231 + +0.7 440,231 + -1.1 440,231 + +1.4 440,231 + +1.9 440,231 + +1.9 440,231 + +0.6 440,231 + +0.9 440,231 + +0.9 440,231 + +0.1 440,231 + +1.4 440,231 + +0.8 440,231 + +0.4 440,231 + +1.8 440,232 - 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Or see this region's nucleotide sequence