Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_05519

Experiment: Pectin from citrus peel; autoclaved 2.5 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pectin from citrus peel; autoclaved 2.5 mg/mL (C)
1,029,129	-		BACOVA_05518	0.16	-2.0
1,029,129	-		BACOVA_05518	0.16	+0.6
1,029,132	+		BACOVA_05518	0.16	+0.3
1,029,133	-		BACOVA_05518	0.16	-1.5
1,029,136	-		BACOVA_05518	0.16	-0.8
1,029,136	-		BACOVA_05518	0.16	-0.1
1,029,136	-		BACOVA_05518	0.16	+0.0
1,029,139	-		BACOVA_05518	0.17	-0.1
1,029,139	-		BACOVA_05518	0.17	+0.7
1,029,139	-		BACOVA_05518	0.17	+0.1
1,029,182	-		BACOVA_05518	0.20	-1.1
1,029,201	-		BACOVA_05518	0.22	+0.2
1,029,201	-		BACOVA_05518	0.22	-0.8
1,029,204	+		BACOVA_05518	0.22	-0.5
1,029,204	+		BACOVA_05518	0.22	-2.0
1,029,206	+		BACOVA_05518	0.22	+0.5
1,029,207	-		BACOVA_05518	0.22	+0.8
1,029,213	-		BACOVA_05518	0.23	-0.9
1,029,213	-		BACOVA_05518	0.23	+0.2
1,029,248	+		BACOVA_05518	0.26	-1.7
1,029,249	-		BACOVA_05518	0.26	+1.3
1,029,249	-		BACOVA_05518	0.26	-0.1
1,029,249	-		BACOVA_05518	0.26	-1.9
1,029,256	-		BACOVA_05518	0.26	+1.7
1,029,256	-		BACOVA_05518	0.26	-0.3
1,029,261	-		BACOVA_05518	0.27	+0.2
1,029,280	-		BACOVA_05518	0.28	-1.5
1,029,282	+		BACOVA_05518	0.29	-0.3
1,029,288	-		BACOVA_05518	0.29	+1.7
1,029,288	-		BACOVA_05518	0.29	+0.0
1,029,396	-		BACOVA_05518	0.38	+0.6
1,029,396	-		BACOVA_05518	0.38	+0.2
1,029,396	-		BACOVA_05518	0.38	-1.3
1,029,440	+		BACOVA_05518	0.42	-0.8
1,029,468	+		BACOVA_05518	0.44	-1.3
1,029,496	-		BACOVA_05518	0.47	-1.1
1,029,575	-		BACOVA_05518	0.54	+0.1
1,029,585	-		BACOVA_05518	0.54	+0.2
1,029,631	-		BACOVA_05518	0.58	-0.5
1,029,654	-		BACOVA_05518	0.60	-0.2
1,029,661	+		BACOVA_05518	0.61	+0.7
1,029,693	-		BACOVA_05518	0.64	+0.5
1,029,696	+		BACOVA_05518	0.64	-0.5
1,029,699	-		BACOVA_05518	0.64	-0.5
1,029,714	-		BACOVA_05518	0.65	-1.3
1,029,714	-		BACOVA_05518	0.65	+0.2
1,029,719	-		BACOVA_05518	0.66	-0.0
1,029,740	-		BACOVA_05518	0.68	-0.3
1,029,740	-		BACOVA_05518	0.68	+0.2
1,029,742	-		BACOVA_05518	0.68	-1.6
1,029,753	-		BACOVA_05518	0.69	+0.1
1,029,753	-		BACOVA_05518	0.69	+0.5
1,029,763	+		BACOVA_05518	0.69	+0.5
1,029,820	-		BACOVA_05518	0.74	-0.8
1,029,820	-		BACOVA_05518	0.74	+0.7
1,029,840	-		BACOVA_05518	0.76	-1.0
1,029,841	+		BACOVA_05518	0.76	-0.1
1,029,874	-		BACOVA_05518	0.79	-0.4
1,029,918	+		BACOVA_05518	0.83	-0.2
1,029,972	-		BACOVA_05518	0.87	+0.9
1,029,972	-		BACOVA_05518	0.87	-0.1
1,029,985	-		BACOVA_05518	0.88	-0.4
1,030,021	+				-0.4
1,030,024	-				-0.5
1,030,045	-				-0.3
1,030,052	-				+0.5
1,030,052	-				-1.0
1,030,116	-				+0.0
1,030,142	-				-0.8
1,030,169	-				+0.8
1,030,252	+		BACOVA_05519	0.10	+1.2
1,030,253	-		BACOVA_05519	0.10	-2.0
1,030,255	+		BACOVA_05519	0.10	-1.5
1,030,258	-		BACOVA_05519	0.11	-1.4
1,030,258	-		BACOVA_05519	0.11	-0.8
1,030,294	-		BACOVA_05519	0.14	-1.1
1,030,294	-		BACOVA_05519	0.14	-0.4
1,030,297	+		BACOVA_05519	0.14	-1.2
1,030,298	-		BACOVA_05519	0.14	+0.2
1,030,317	+		BACOVA_05519	0.15	+0.7
1,030,317	+		BACOVA_05519	0.15	+1.4
1,030,317	+		BACOVA_05519	0.15	+0.2
1,030,317	+		BACOVA_05519	0.15	-1.6
1,030,318	-		BACOVA_05519	0.15	+0.0
1,030,318	-		BACOVA_05519	0.15	-0.6
1,030,408	-		BACOVA_05519	0.23	-1.1
1,030,412	-		BACOVA_05519	0.23	+0.1
1,030,587	-		BACOVA_05519	0.37	-0.2
1,030,600	-		BACOVA_05519	0.38	-2.3
1,030,614	+		BACOVA_05519	0.39	+0.1
1,030,615	-		BACOVA_05519	0.39	+1.0
1,030,646	-		BACOVA_05519	0.42	+0.4
1,030,646	-		BACOVA_05519	0.42	+0.1
1,030,680	-		BACOVA_05519	0.44	+0.5
1,030,699	-		BACOVA_05519	0.46	-0.6
1,030,792	-		BACOVA_05519	0.53	-1.0
1,030,796	+		BACOVA_05519	0.54	-1.1
1,030,797	-		BACOVA_05519	0.54	-0.1
1,030,798	+		BACOVA_05519	0.54	-3.1
1,030,799	-		BACOVA_05519	0.54	-0.6
1,030,801	+		BACOVA_05519	0.54	+0.2
1,030,819	-		BACOVA_05519	0.55	-0.4
1,030,850	-		BACOVA_05519	0.58	-0.8
1,030,913	-		BACOVA_05519	0.63	+0.9
1,030,917	+		BACOVA_05519	0.63	-0.2
1,030,942	+		BACOVA_05519	0.65	+0.3
1,031,007	-		BACOVA_05519	0.70	-0.6
1,031,008	+		BACOVA_05519	0.70	-0.4
1,031,008	+		BACOVA_05519	0.70	-0.2
1,031,023	-		BACOVA_05519	0.72	-1.6
1,031,050	+		BACOVA_05519	0.74	+0.4
1,031,054	-		BACOVA_05519	0.74	-0.5
1,031,055	+		BACOVA_05519	0.74	-0.3
1,031,055	+		BACOVA_05519	0.74	+0.2
1,031,060	-		BACOVA_05519	0.75	+2.0
1,031,084	-		BACOVA_05519	0.77	-0.0
1,031,119	+		BACOVA_05519	0.79	+1.7
1,031,128	+		BACOVA_05519	0.80	-0.1
1,031,134	+		BACOVA_05519	0.81	-0.7
1,031,194	+		BACOVA_05519	0.85	+0.4
1,031,213	+		BACOVA_05519	0.87	+0.4
1,031,227	+		BACOVA_05519	0.88	+0.2
1,031,319	-				-0.1
1,031,320	+				+0.9
1,031,324	-				+0.8
1,031,349	+				+1.3
1,031,349	+				+0.3
1,031,353	+				+0.7
1,031,354	-				-1.3
1,031,359	+				+0.7
1,031,379	-				-0.9
1,031,390	-				+1.0
1,031,390	-				-1.0
1,031,390	-				+1.9
1,031,392	-				+1.5
1,031,415	-				+1.1
1,031,427	+				+0.4
1,031,428	-				-0.4
1,031,435	-				-0.7
1,031,437	-				+1.0
1,031,439	-				+0.2
1,031,439	-				-3.2
1,031,487	+		BACOVA_05520	0.13	+0.6
1,031,488	-		BACOVA_05520	0.13	+1.4
1,031,491	+		BACOVA_05520	0.13	+0.7
1,031,492	-		BACOVA_05520	0.13	-1.1
1,031,492	-		BACOVA_05520	0.13	-0.0
1,031,605	+		BACOVA_05520	0.26	+0.7
1,031,618	+		BACOVA_05520	0.28	+1.0
1,031,638	-		BACOVA_05520	0.30	+0.5
1,031,638	-		BACOVA_05520	0.30	-1.0
1,031,640	+		BACOVA_05520	0.30	+0.0
1,031,641	-		BACOVA_05520	0.30	-0.8
1,031,644	+		BACOVA_05520	0.31	+0.2
1,031,658	-		BACOVA_05520	0.32	-0.9
1,031,658	-		BACOVA_05520	0.32	-0.6
1,031,669	+		BACOVA_05520	0.34	-1.2
1,031,669	+		BACOVA_05520	0.34	+0.0
1,031,670	-		BACOVA_05520	0.34	+0.7
1,031,679	-		BACOVA_05520	0.35	-0.6
1,031,681	+		BACOVA_05520	0.35	-1.6
1,031,686	+		BACOVA_05520	0.36	-1.1
1,031,713	+		BACOVA_05520	0.39	+0.4
1,031,780	+		BACOVA_05520	0.47	+0.0
1,031,781	-		BACOVA_05520	0.47	+0.3
1,031,799	-		BACOVA_05520	0.49	-0.3
1,031,872	-		BACOVA_05520	0.57	-0.2
1,031,883	-		BACOVA_05520	0.59	+1.5
1,031,913	+		BACOVA_05520	0.62	-2.2
1,031,914	-		BACOVA_05520	0.62	-1.5
1,031,917	-		BACOVA_05520	0.62	-0.6
1,031,919	-		BACOVA_05520	0.63	+0.3
1,031,929	+		BACOVA_05520	0.64	+0.5
1,031,937	-		BACOVA_05520	0.65	+0.2
1,031,937	-		BACOVA_05520	0.65	-1.0
1,031,938	+		BACOVA_05520	0.65	+0.6
1,031,939	-		BACOVA_05520	0.65	-0.1
1,031,939	-		BACOVA_05520	0.65	+0.5
1,031,975	+		BACOVA_05520	0.69	-0.8
1,031,996	-		BACOVA_05520	0.72	-0.5
1,032,009	-		BACOVA_05520	0.73	+0.0
1,032,016	+		BACOVA_05520	0.74	+0.3
1,032,017	-		BACOVA_05520	0.74	-1.9
1,032,017	-		BACOVA_05520	0.74	+0.7
1,032,024	-		BACOVA_05520	0.75	-1.1
1,032,024	-		BACOVA_05520	0.75	+0.9
1,032,024	-		BACOVA_05520	0.75	+0.2
1,032,024	-		BACOVA_05520	0.75	-1.1
1,032,029	-		BACOVA_05520	0.75	-2.3
1,032,068	-		BACOVA_05520	0.80	+1.6
1,032,072	-		BACOVA_05520	0.80	+0.9
1,032,098	+		BACOVA_05520	0.84	-0.5
1,032,099	-		BACOVA_05520	0.84	-1.0
1,032,106	-		BACOVA_05520	0.84	+0.2
1,032,107	-		BACOVA_05520	0.85	+1.6
1,032,107	-		BACOVA_05520	0.85	+0.0
1,032,107	-		BACOVA_05520	0.85	+0.4
1,032,111	-		BACOVA_05520	0.85	+0.5
1,032,114	-		BACOVA_05520	0.85	-0.8
1,032,114	-		BACOVA_05520	0.85	-1.1
1,032,114	-		BACOVA_05520	0.85	-0.5
1,032,116	+		BACOVA_05520	0.86	+0.2
1,032,116	+		BACOVA_05520	0.86	-0.0
1,032,116	+		BACOVA_05520	0.86	+0.2
1,032,121	-		BACOVA_05520	0.86	+0.8
1,032,121	-		BACOVA_05520	0.86	+0.8
1,032,164	-				+0.9
1,032,169	+				-1.5
1,032,170	-				+0.2
1,032,170	-				-0.4
1,032,230	+				-0.4
1,032,231	-				+0.6
1,032,240	+				+0.5
1,032,240	+				+0.3
1,032,241	-				-1.1
1,032,241	-				-1.1
1,032,241	-				-0.1
1,032,241	-				+0.4
1,032,241	-				-0.7
1,032,246	+				-0.1
1,032,253	+				+0.1
1,032,253	+				+0.7
1,032,253	+				-0.2
1,032,257	-				-0.1
1,032,302	+				+1.4
1,032,305	+				+0.0
1,032,306	-				+0.7
1,032,306	-				+0.3
1,032,313	-				+0.9
1,032,314	+				+1.3
1,032,314	+				-0.8
1,032,314	+				+0.1
1,032,315	-				-0.7
1,032,317	+				+0.7
1,032,339	+				+0.4
1,032,339	+				-1.6
1,032,342	-				-1.4
1,032,342	-				-0.7
1,032,366	-				+1.0
1,032,371	+				-0.4