Experiment: Ethanolamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_03178 and MPMX26_03179 overlap by 4 nucleotides MPMX26_03179 and MPMX26_03180 are separated by 253 nucleotides MPMX26_03180 and MPMX26_03181 are separated by 203 nucleotides MPMX26_03181 and MPMX26_03182 are separated by 574 nucleotides
MPMX26_03178: MPMX26_03178 - hypothetical protein, at 34,527 to 34,859
_03178
MPMX26_03179: MPMX26_03179 - hypothetical protein, at 34,856 to 35,104
_03179
MPMX26_03180: MPMX26_03180 - hypothetical protein, at 35,358 to 35,561
_03180
MPMX26_03181: MPMX26_03181 - DNA-invertase hin, at 35,765 to 36,331
_03181
MPMX26_03182: MPMX26_03182 - HTH-type transcriptional regulator CysL, at 36,906 to 37,763
_03182
Position (kb) 35
36
37 Strain fitness (log2 ratio) -2
-1
0
1
2 at 34.871 kb on - strand at 34.893 kb on - strand, within MPMX26_03179 at 34.901 kb on - strand, within MPMX26_03179 at 34.901 kb on - strand, within MPMX26_03179 at 34.908 kb on - strand, within MPMX26_03179 at 34.916 kb on - strand, within MPMX26_03179 at 34.935 kb on - strand, within MPMX26_03179 at 34.940 kb on - strand, within MPMX26_03179 at 34.940 kb on - strand, within MPMX26_03179 at 34.940 kb on - strand, within MPMX26_03179 at 34.940 kb on - strand, within MPMX26_03179 at 34.940 kb on - strand, within MPMX26_03179 at 34.940 kb on - strand, within MPMX26_03179 at 35.119 kb on - strand at 35.124 kb on - strand at 35.124 kb on - strand at 35.130 kb on + strand at 35.132 kb on + strand at 35.132 kb on + strand at 35.132 kb on + strand at 35.132 kb on + strand at 35.132 kb on + strand at 35.132 kb on + strand at 35.132 kb on + strand at 35.132 kb on + strand at 35.140 kb on - strand at 35.140 kb on - strand at 35.140 kb on - strand at 35.140 kb on - strand at 35.140 kb on - strand at 35.140 kb on - strand at 35.140 kb on - strand at 35.204 kb on - strand at 35.291 kb on + strand at 35.291 kb on + strand at 35.291 kb on + strand at 35.291 kb on + strand at 35.291 kb on + strand at 35.291 kb on + strand at 35.291 kb on + strand at 35.291 kb on + strand at 35.291 kb on + strand at 35.299 kb on - strand at 35.332 kb on + strand at 35.342 kb on + strand at 35.342 kb on + strand at 35.397 kb on + strand, within MPMX26_03180 at 35.397 kb on + strand, within MPMX26_03180 at 35.397 kb on + strand, within MPMX26_03180 at 35.493 kb on + strand, within MPMX26_03180 at 35.514 kb on + strand, within MPMX26_03180 at 35.515 kb on + strand, within MPMX26_03180 at 35.518 kb on + strand, within MPMX26_03180 at 35.544 kb on + strand at 35.555 kb on + strand at 35.555 kb on + strand at 35.581 kb on + strand at 35.784 kb on - strand at 35.854 kb on - strand, within MPMX26_03181 at 35.856 kb on - strand, within MPMX26_03181 at 35.881 kb on - strand, within MPMX26_03181 at 35.882 kb on - strand, within MPMX26_03181 at 35.897 kb on - strand, within MPMX26_03181 at 35.911 kb on - strand, within MPMX26_03181 at 35.911 kb on - strand, within MPMX26_03181 at 35.918 kb on - strand, within MPMX26_03181 at 35.918 kb on - strand, within MPMX26_03181 at 35.929 kb on - strand, within MPMX26_03181 at 35.929 kb on - strand, within MPMX26_03181 at 35.929 kb on - strand, within MPMX26_03181 at 35.934 kb on - strand, within MPMX26_03181 at 35.934 kb on - strand, within MPMX26_03181 at 36.157 kb on - strand, within MPMX26_03181 at 36.162 kb on - strand, within MPMX26_03181 at 36.190 kb on - strand, within MPMX26_03181 at 36.190 kb on - strand, within MPMX26_03181 at 36.190 kb on - strand, within MPMX26_03181 at 36.190 kb on - strand, within MPMX26_03181 at 36.233 kb on - strand, within MPMX26_03181 at 36.287 kb on - strand at 36.287 kb on - strand at 36.297 kb on - strand at 36.299 kb on - strand at 36.302 kb on - strand at 36.302 kb on - strand at 36.305 kb on + strand at 36.307 kb on - strand at 36.312 kb on - strand at 36.313 kb on - strand at 36.520 kb on + strand at 36.531 kb on + strand at 36.560 kb on + strand at 36.703 kb on - strand at 36.727 kb on + strand at 36.729 kb on - strand at 36.735 kb on - strand at 36.741 kb on + strand at 36.741 kb on + strand at 36.741 kb on + strand at 36.749 kb on - strand at 36.812 kb on + strand at 36.820 kb on - strand at 36.820 kb on - strand at 36.878 kb on - strand at 36.880 kb on - strand at 36.880 kb on - strand at 36.909 kb on - strand at 36.962 kb on - strand at 37.023 kb on - strand, within MPMX26_03182 at 37.038 kb on - strand, within MPMX26_03182 at 37.038 kb on - strand, within MPMX26_03182 at 37.038 kb on - strand, within MPMX26_03182 at 37.038 kb on - strand, within MPMX26_03182 at 37.038 kb on - strand, within MPMX26_03182 at 37.038 kb on - strand, within MPMX26_03182 at 37.038 kb on - strand, within MPMX26_03182 at 37.038 kb on - strand, within MPMX26_03182 at 37.038 kb on - strand, within MPMX26_03182 at 37.038 kb on - strand, within MPMX26_03182 at 37.038 kb on - strand, within MPMX26_03182 at 37.038 kb on - strand, within MPMX26_03182 at 37.038 kb on - strand, within MPMX26_03182 at 37.038 kb on - strand, within MPMX26_03182 at 37.040 kb on - strand, within MPMX26_03182 at 37.059 kb on - strand, within MPMX26_03182 at 37.059 kb on - strand, within MPMX26_03182 at 37.059 kb on - strand, within MPMX26_03182 at 37.082 kb on - strand, within MPMX26_03182 at 37.082 kb on - strand, within MPMX26_03182 at 37.082 kb on - strand, within MPMX26_03182 at 37.082 kb on - strand, within MPMX26_03182 at 37.082 kb on - strand, within MPMX26_03182 at 37.082 kb on - strand, within MPMX26_03182 at 37.091 kb on - strand, within MPMX26_03182 at 37.091 kb on - strand, within MPMX26_03182 at 37.091 kb on - strand, within MPMX26_03182 at 37.091 kb on - strand, within MPMX26_03182 at 37.091 kb on - strand, within MPMX26_03182 at 37.096 kb on - strand, within MPMX26_03182 at 37.114 kb on - strand, within MPMX26_03182 at 37.122 kb on - strand, within MPMX26_03182 at 37.122 kb on - strand, within MPMX26_03182 at 37.122 kb on - strand, within MPMX26_03182 at 37.122 kb on - strand, within MPMX26_03182 at 37.135 kb on - strand, within MPMX26_03182 at 37.141 kb on - strand, within MPMX26_03182 at 37.181 kb on - strand, within MPMX26_03182 at 37.227 kb on - strand, within MPMX26_03182 at 37.297 kb on - strand, within MPMX26_03182 at 37.297 kb on - strand, within MPMX26_03182 at 37.297 kb on - strand, within MPMX26_03182 at 37.321 kb on - strand, within MPMX26_03182 at 37.321 kb on - strand, within MPMX26_03182 at 37.330 kb on - strand, within MPMX26_03182
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanolamine (N) remove 34,871 - +0.7 34,893 - MPMX26_03179 0.15 +0.2 34,901 - MPMX26_03179 0.18 +0.3 34,901 - MPMX26_03179 0.18 -0.2 34,908 - MPMX26_03179 0.21 +0.4 34,916 - MPMX26_03179 0.24 -1.4 34,935 - MPMX26_03179 0.32 +1.2 34,940 - MPMX26_03179 0.34 -0.4 34,940 - MPMX26_03179 0.34 +0.3 34,940 - MPMX26_03179 0.34 -1.9 34,940 - MPMX26_03179 0.34 +0.9 34,940 - MPMX26_03179 0.34 -0.6 34,940 - MPMX26_03179 0.34 -0.5 35,119 - -0.1 35,124 - +0.9 35,124 - -0.7 35,130 + +0.8 35,132 + -0.4 35,132 + -0.6 35,132 + -0.8 35,132 + -0.1 35,132 + +0.2 35,132 + -0.8 35,132 + -0.5 35,132 + -1.1 35,140 - -0.1 35,140 - -0.6 35,140 - -0.3 35,140 - +0.6 35,140 - -0.5 35,140 - +0.2 35,140 - +1.3 35,204 - +1.3 35,291 + +0.3 35,291 + -0.2 35,291 + -0.5 35,291 + +0.6 35,291 + -0.2 35,291 + +0.4 35,291 + -0.0 35,291 + +0.4 35,291 + +0.2 35,299 - +0.5 35,332 + -0.0 35,342 + -0.7 35,342 + +0.3 35,397 + MPMX26_03180 0.19 +1.3 35,397 + MPMX26_03180 0.19 +0.4 35,397 + MPMX26_03180 0.19 +0.3 35,493 + MPMX26_03180 0.66 +0.3 35,514 + MPMX26_03180 0.76 +0.1 35,515 + MPMX26_03180 0.77 +0.2 35,518 + MPMX26_03180 0.78 +0.7 35,544 + +0.1 35,555 + +0.9 35,555 + +2.5 35,581 + -0.2 35,784 - -1.7 35,854 - MPMX26_03181 0.16 +0.3 35,856 - MPMX26_03181 0.16 +0.7 35,881 - MPMX26_03181 0.20 -0.1 35,882 - MPMX26_03181 0.21 -0.2 35,897 - MPMX26_03181 0.23 +0.6 35,911 - MPMX26_03181 0.26 +0.6 35,911 - MPMX26_03181 0.26 -0.0 35,918 - MPMX26_03181 0.27 -0.3 35,918 - MPMX26_03181 0.27 +0.0 35,929 - MPMX26_03181 0.29 +0.3 35,929 - MPMX26_03181 0.29 -0.1 35,929 - MPMX26_03181 0.29 +0.5 35,934 - MPMX26_03181 0.30 +0.4 35,934 - MPMX26_03181 0.30 +0.9 36,157 - MPMX26_03181 0.69 +0.1 36,162 - MPMX26_03181 0.70 +0.9 36,190 - MPMX26_03181 0.75 -0.0 36,190 - MPMX26_03181 0.75 -0.1 36,190 - MPMX26_03181 0.75 +1.7 36,190 - MPMX26_03181 0.75 +1.1 36,233 - MPMX26_03181 0.83 -0.6 36,287 - +0.3 36,287 - +0.4 36,297 - +0.0 36,299 - +0.3 36,302 - +0.3 36,302 - +0.2 36,305 + +0.2 36,307 - -2.3 36,312 - -0.4 36,313 - -0.1 36,520 + +1.6 36,531 + +0.4 36,560 + +0.4 36,703 - +0.2 36,727 + +1.0 36,729 - -0.1 36,735 - +0.3 36,741 + -0.5 36,741 + +0.1 36,741 + +1.1 36,749 - +1.1 36,812 + -1.5 36,820 - +0.6 36,820 - -1.3 36,878 - +0.1 36,880 - -0.6 36,880 - +0.2 36,909 - +0.8 36,962 - +0.5 37,023 - MPMX26_03182 0.14 -0.9 37,038 - MPMX26_03182 0.15 +0.5 37,038 - MPMX26_03182 0.15 -0.3 37,038 - MPMX26_03182 0.15 -0.5 37,038 - MPMX26_03182 0.15 -0.0 37,038 - MPMX26_03182 0.15 +0.3 37,038 - MPMX26_03182 0.15 -0.2 37,038 - MPMX26_03182 0.15 -0.4 37,038 - MPMX26_03182 0.15 +0.3 37,038 - MPMX26_03182 0.15 -0.3 37,038 - MPMX26_03182 0.15 -1.0 37,038 - MPMX26_03182 0.15 +0.7 37,038 - MPMX26_03182 0.15 -0.3 37,038 - MPMX26_03182 0.15 -0.3 37,038 - MPMX26_03182 0.15 -0.3 37,040 - MPMX26_03182 0.16 +0.2 37,059 - MPMX26_03182 0.18 -1.0 37,059 - MPMX26_03182 0.18 +0.1 37,059 - MPMX26_03182 0.18 -0.4 37,082 - MPMX26_03182 0.21 +0.2 37,082 - MPMX26_03182 0.21 +0.3 37,082 - MPMX26_03182 0.21 -1.0 37,082 - MPMX26_03182 0.21 -0.6 37,082 - MPMX26_03182 0.21 +0.2 37,082 - MPMX26_03182 0.21 -0.0 37,091 - MPMX26_03182 0.22 -0.1 37,091 - MPMX26_03182 0.22 -1.0 37,091 - MPMX26_03182 0.22 +0.0 37,091 - MPMX26_03182 0.22 +0.1 37,091 - MPMX26_03182 0.22 +0.2 37,096 - MPMX26_03182 0.22 +0.8 37,114 - MPMX26_03182 0.24 -0.3 37,122 - MPMX26_03182 0.25 +0.8 37,122 - MPMX26_03182 0.25 +0.5 37,122 - MPMX26_03182 0.25 +0.1 37,122 - MPMX26_03182 0.25 +0.2 37,135 - MPMX26_03182 0.27 -0.1 37,141 - MPMX26_03182 0.27 +0.0 37,181 - MPMX26_03182 0.32 +0.4 37,227 - MPMX26_03182 0.37 +0.4 37,297 - MPMX26_03182 0.46 +0.6 37,297 - MPMX26_03182 0.46 -0.6 37,297 - MPMX26_03182 0.46 -0.6 37,321 - MPMX26_03182 0.48 -1.1 37,321 - MPMX26_03182 0.48 -0.2 37,330 - MPMX26_03182 0.49 +0.1
Or see this region's nucleotide sequence