Experiment: Ethanolamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02848 and MPMX26_02849 are separated by 422 nucleotides MPMX26_02849 and MPMX26_02850 are separated by 217 nucleotides
MPMX26_02848: MPMX26_02848 - Ribonuclease D, at 2,939,183 to 2,939,839
_02848
MPMX26_02849: MPMX26_02849 - 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, at 2,940,262 to 2,941,002
_02849
MPMX26_02850: MPMX26_02850 - hypothetical protein, at 2,941,220 to 2,942,167
_02850
Position (kb)
2940
2941
2942 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 2939.413 kb on - strand, within MPMX26_02848 at 2939.415 kb on + strand, within MPMX26_02848 at 2939.755 kb on - strand, within MPMX26_02848 at 2939.834 kb on - strand at 2939.834 kb on - strand at 2940.308 kb on + strand at 2940.308 kb on + strand at 2940.308 kb on + strand at 2940.308 kb on + strand at 2940.308 kb on + strand at 2940.308 kb on + strand at 2940.308 kb on + strand at 2940.313 kb on + strand at 2940.325 kb on + strand at 2940.362 kb on + strand, within MPMX26_02849 at 2940.362 kb on + strand, within MPMX26_02849 at 2940.362 kb on + strand, within MPMX26_02849 at 2940.372 kb on + strand, within MPMX26_02849 at 2940.372 kb on + strand, within MPMX26_02849 at 2940.372 kb on + strand, within MPMX26_02849 at 2940.372 kb on + strand, within MPMX26_02849 at 2940.372 kb on + strand, within MPMX26_02849 at 2940.372 kb on + strand, within MPMX26_02849 at 2940.372 kb on + strand, within MPMX26_02849 at 2940.398 kb on + strand, within MPMX26_02849 at 2940.433 kb on + strand, within MPMX26_02849 at 2940.433 kb on + strand, within MPMX26_02849 at 2940.451 kb on + strand, within MPMX26_02849 at 2940.457 kb on + strand, within MPMX26_02849 at 2940.479 kb on + strand, within MPMX26_02849 at 2940.484 kb on + strand, within MPMX26_02849 at 2940.493 kb on + strand, within MPMX26_02849 at 2940.510 kb on + strand, within MPMX26_02849 at 2940.573 kb on + strand, within MPMX26_02849 at 2940.662 kb on + strand, within MPMX26_02849 at 2940.673 kb on + strand, within MPMX26_02849 at 2940.673 kb on + strand, within MPMX26_02849 at 2940.673 kb on + strand, within MPMX26_02849 at 2940.712 kb on + strand, within MPMX26_02849 at 2940.712 kb on + strand, within MPMX26_02849 at 2940.739 kb on + strand, within MPMX26_02849 at 2940.742 kb on + strand, within MPMX26_02849 at 2940.744 kb on + strand, within MPMX26_02849 at 2940.744 kb on + strand, within MPMX26_02849 at 2940.744 kb on + strand, within MPMX26_02849 at 2940.749 kb on + strand, within MPMX26_02849 at 2940.749 kb on + strand, within MPMX26_02849 at 2940.797 kb on + strand, within MPMX26_02849 at 2940.807 kb on + strand, within MPMX26_02849 at 2940.809 kb on + strand, within MPMX26_02849 at 2940.809 kb on + strand, within MPMX26_02849 at 2940.809 kb on + strand, within MPMX26_02849 at 2940.809 kb on + strand, within MPMX26_02849 at 2940.820 kb on + strand, within MPMX26_02849 at 2940.825 kb on + strand, within MPMX26_02849 at 2940.825 kb on + strand, within MPMX26_02849 at 2940.878 kb on + strand, within MPMX26_02849 at 2940.885 kb on + strand, within MPMX26_02849 at 2940.901 kb on + strand, within MPMX26_02849 at 2940.916 kb on + strand, within MPMX26_02849 at 2940.918 kb on + strand, within MPMX26_02849 at 2940.940 kb on + strand at 2940.940 kb on + strand at 2940.940 kb on + strand at 2940.940 kb on + strand at 2940.944 kb on + strand at 2940.944 kb on + strand at 2940.944 kb on + strand at 2940.954 kb on + strand at 2941.004 kb on + strand at 2941.014 kb on + strand at 2941.014 kb on + strand at 2941.014 kb on + strand at 2941.014 kb on + strand at 2941.014 kb on + strand at 2941.027 kb on + strand at 2941.079 kb on - strand at 2941.171 kb on + strand at 2941.246 kb on + strand at 2941.289 kb on + strand at 2941.300 kb on + strand at 2941.333 kb on + strand, within MPMX26_02850 at 2941.333 kb on + strand, within MPMX26_02850 at 2941.402 kb on + strand, within MPMX26_02850 at 2941.422 kb on + strand, within MPMX26_02850 at 2941.422 kb on + strand, within MPMX26_02850 at 2941.499 kb on + strand, within MPMX26_02850 at 2941.575 kb on + strand, within MPMX26_02850 at 2941.600 kb on + strand, within MPMX26_02850 at 2941.600 kb on + strand, within MPMX26_02850 at 2941.601 kb on + strand, within MPMX26_02850 at 2941.606 kb on + strand, within MPMX26_02850 at 2941.606 kb on + strand, within MPMX26_02850 at 2941.622 kb on + strand, within MPMX26_02850 at 2941.638 kb on + strand, within MPMX26_02850 at 2941.645 kb on + strand, within MPMX26_02850 at 2941.662 kb on + strand, within MPMX26_02850 at 2941.693 kb on + strand, within MPMX26_02850 at 2941.705 kb on + strand, within MPMX26_02850 at 2941.715 kb on + strand, within MPMX26_02850 at 2941.766 kb on + strand, within MPMX26_02850 at 2941.776 kb on + strand, within MPMX26_02850 at 2941.782 kb on + strand, within MPMX26_02850 at 2941.795 kb on + strand, within MPMX26_02850 at 2941.808 kb on + strand, within MPMX26_02850 at 2941.831 kb on + strand, within MPMX26_02850 at 2941.838 kb on + strand, within MPMX26_02850 at 2941.895 kb on + strand, within MPMX26_02850 at 2941.895 kb on + strand, within MPMX26_02850 at 2941.895 kb on + strand, within MPMX26_02850 at 2941.922 kb on + strand, within MPMX26_02850 at 2941.922 kb on + strand, within MPMX26_02850 at 2941.927 kb on + strand, within MPMX26_02850 at 2941.927 kb on + strand, within MPMX26_02850 at 2941.929 kb on + strand, within MPMX26_02850 at 2941.932 kb on + strand, within MPMX26_02850 at 2941.932 kb on + strand, within MPMX26_02850 at 2941.932 kb on + strand, within MPMX26_02850 at 2941.939 kb on + strand, within MPMX26_02850 at 2941.939 kb on + strand, within MPMX26_02850 at 2941.939 kb on + strand, within MPMX26_02850 at 2941.939 kb on + strand, within MPMX26_02850 at 2941.939 kb on + strand, within MPMX26_02850 at 2941.939 kb on + strand, within MPMX26_02850 at 2941.939 kb on + strand, within MPMX26_02850 at 2941.939 kb on + strand, within MPMX26_02850 at 2941.939 kb on + strand, within MPMX26_02850 at 2941.939 kb on + strand, within MPMX26_02850 at 2941.939 kb on + strand, within MPMX26_02850 at 2941.939 kb on + strand, within MPMX26_02850 at 2941.939 kb on + strand, within MPMX26_02850 at 2941.939 kb on + strand, within MPMX26_02850 at 2941.941 kb on + strand, within MPMX26_02850 at 2941.944 kb on + strand, within MPMX26_02850 at 2941.944 kb on + strand, within MPMX26_02850 at 2941.944 kb on + strand, within MPMX26_02850 at 2941.944 kb on + strand, within MPMX26_02850 at 2941.944 kb on + strand, within MPMX26_02850 at 2941.944 kb on + strand, within MPMX26_02850 at 2941.947 kb on - strand, within MPMX26_02850 at 2941.979 kb on + strand, within MPMX26_02850 at 2941.982 kb on + strand, within MPMX26_02850 at 2941.987 kb on + strand, within MPMX26_02850
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanolamine (N) remove 2,939,413 - MPMX26_02848 0.35 +0.3 2,939,415 + MPMX26_02848 0.35 -1.7 2,939,755 - MPMX26_02848 0.87 +0.4 2,939,834 - +0.4 2,939,834 - +0.3 2,940,308 + -3.7 2,940,308 + -3.1 2,940,308 + -2.1 2,940,308 + -2.4 2,940,308 + -1.8 2,940,308 + -3.8 2,940,308 + -2.9 2,940,313 + -3.9 2,940,325 + -4.2 2,940,362 + MPMX26_02849 0.13 -3.6 2,940,362 + MPMX26_02849 0.13 -3.5 2,940,362 + MPMX26_02849 0.13 -3.3 2,940,372 + MPMX26_02849 0.15 -5.5 2,940,372 + MPMX26_02849 0.15 -3.1 2,940,372 + MPMX26_02849 0.15 -4.0 2,940,372 + MPMX26_02849 0.15 -2.9 2,940,372 + MPMX26_02849 0.15 -3.6 2,940,372 + MPMX26_02849 0.15 -4.0 2,940,372 + MPMX26_02849 0.15 -3.7 2,940,398 + MPMX26_02849 0.18 -3.9 2,940,433 + MPMX26_02849 0.23 -4.7 2,940,433 + MPMX26_02849 0.23 -3.9 2,940,451 + MPMX26_02849 0.26 -2.9 2,940,457 + MPMX26_02849 0.26 -3.1 2,940,479 + MPMX26_02849 0.29 -3.7 2,940,484 + MPMX26_02849 0.30 -2.7 2,940,493 + MPMX26_02849 0.31 -4.4 2,940,510 + MPMX26_02849 0.33 -2.9 2,940,573 + MPMX26_02849 0.42 -3.4 2,940,662 + MPMX26_02849 0.54 -1.9 2,940,673 + MPMX26_02849 0.55 -4.3 2,940,673 + MPMX26_02849 0.55 -2.5 2,940,673 + MPMX26_02849 0.55 -3.0 2,940,712 + MPMX26_02849 0.61 -3.7 2,940,712 + MPMX26_02849 0.61 -3.7 2,940,739 + MPMX26_02849 0.64 -1.1 2,940,742 + MPMX26_02849 0.65 -1.5 2,940,744 + MPMX26_02849 0.65 -2.9 2,940,744 + MPMX26_02849 0.65 -4.2 2,940,744 + MPMX26_02849 0.65 -4.4 2,940,749 + MPMX26_02849 0.66 -4.5 2,940,749 + MPMX26_02849 0.66 -3.1 2,940,797 + MPMX26_02849 0.72 -3.4 2,940,807 + MPMX26_02849 0.74 -4.9 2,940,809 + MPMX26_02849 0.74 -3.5 2,940,809 + MPMX26_02849 0.74 -5.1 2,940,809 + MPMX26_02849 0.74 -3.4 2,940,809 + MPMX26_02849 0.74 -2.5 2,940,820 + MPMX26_02849 0.75 -4.4 2,940,825 + MPMX26_02849 0.76 -3.2 2,940,825 + MPMX26_02849 0.76 -4.0 2,940,878 + MPMX26_02849 0.83 -4.3 2,940,885 + MPMX26_02849 0.84 -2.7 2,940,901 + MPMX26_02849 0.86 -3.9 2,940,916 + MPMX26_02849 0.88 -4.9 2,940,918 + MPMX26_02849 0.89 -2.6 2,940,940 + -4.4 2,940,940 + -4.8 2,940,940 + -1.9 2,940,940 + -4.8 2,940,944 + -0.3 2,940,944 + -0.3 2,940,944 + -0.4 2,940,954 + +0.2 2,941,004 + +0.3 2,941,014 + +0.1 2,941,014 + +0.3 2,941,014 + -0.1 2,941,014 + +0.2 2,941,014 + -0.9 2,941,027 + -0.0 2,941,079 - -0.1 2,941,171 + -1.1 2,941,246 + -0.7 2,941,289 + -0.2 2,941,300 + +0.2 2,941,333 + MPMX26_02850 0.12 +0.0 2,941,333 + MPMX26_02850 0.12 +0.2 2,941,402 + MPMX26_02850 0.19 +0.2 2,941,422 + MPMX26_02850 0.21 -0.1 2,941,422 + MPMX26_02850 0.21 +0.2 2,941,499 + MPMX26_02850 0.29 +0.0 2,941,575 + MPMX26_02850 0.37 +0.3 2,941,600 + MPMX26_02850 0.40 +0.3 2,941,600 + MPMX26_02850 0.40 +0.0 2,941,601 + MPMX26_02850 0.40 +0.1 2,941,606 + MPMX26_02850 0.41 -0.1 2,941,606 + MPMX26_02850 0.41 +0.1 2,941,622 + MPMX26_02850 0.42 +0.5 2,941,638 + MPMX26_02850 0.44 -0.7 2,941,645 + MPMX26_02850 0.45 +0.7 2,941,662 + MPMX26_02850 0.47 +0.0 2,941,693 + MPMX26_02850 0.50 +0.4 2,941,705 + MPMX26_02850 0.51 +0.3 2,941,715 + MPMX26_02850 0.52 +0.8 2,941,766 + MPMX26_02850 0.58 +1.3 2,941,776 + MPMX26_02850 0.59 +1.9 2,941,782 + MPMX26_02850 0.59 +0.8 2,941,795 + MPMX26_02850 0.61 -0.9 2,941,808 + MPMX26_02850 0.62 -0.6 2,941,831 + MPMX26_02850 0.64 +0.1 2,941,838 + MPMX26_02850 0.65 -0.5 2,941,895 + MPMX26_02850 0.71 +1.2 2,941,895 + MPMX26_02850 0.71 -0.3 2,941,895 + MPMX26_02850 0.71 -1.5 2,941,922 + MPMX26_02850 0.74 +0.4 2,941,922 + MPMX26_02850 0.74 +0.2 2,941,927 + MPMX26_02850 0.75 +0.1 2,941,927 + MPMX26_02850 0.75 +0.0 2,941,929 + MPMX26_02850 0.75 -0.4 2,941,932 + MPMX26_02850 0.75 +0.4 2,941,932 + MPMX26_02850 0.75 -0.1 2,941,932 + MPMX26_02850 0.75 +0.3 2,941,939 + MPMX26_02850 0.76 +0.5 2,941,939 + MPMX26_02850 0.76 -0.4 2,941,939 + MPMX26_02850 0.76 +0.3 2,941,939 + MPMX26_02850 0.76 -1.3 2,941,939 + MPMX26_02850 0.76 -0.3 2,941,939 + MPMX26_02850 0.76 -0.3 2,941,939 + MPMX26_02850 0.76 +0.3 2,941,939 + MPMX26_02850 0.76 +0.4 2,941,939 + MPMX26_02850 0.76 +0.4 2,941,939 + MPMX26_02850 0.76 -0.2 2,941,939 + MPMX26_02850 0.76 +0.6 2,941,939 + MPMX26_02850 0.76 +0.0 2,941,939 + MPMX26_02850 0.76 +1.1 2,941,939 + MPMX26_02850 0.76 -1.6 2,941,941 + MPMX26_02850 0.76 +0.5 2,941,944 + MPMX26_02850 0.76 -0.3 2,941,944 + MPMX26_02850 0.76 -0.5 2,941,944 + MPMX26_02850 0.76 +0.3 2,941,944 + MPMX26_02850 0.76 -0.6 2,941,944 + MPMX26_02850 0.76 +0.4 2,941,944 + MPMX26_02850 0.76 +0.3 2,941,947 - MPMX26_02850 0.77 -3.0 2,941,979 + MPMX26_02850 0.80 -0.0 2,941,982 + MPMX26_02850 0.80 +1.2 2,941,987 + MPMX26_02850 0.81 +0.5
Or see this region's nucleotide sequence