Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02329

Experiment: Ethanolamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02328 and MPMX26_02329 are separated by 275 nucleotidesMPMX26_02329 and MPMX26_02330 are separated by 26 nucleotides MPMX26_02328: MPMX26_02328 - Lysine--tRNA ligase, heat inducible, at 2,402,026 to 2,403,555 _02328 MPMX26_02329: MPMX26_02329 - hypothetical protein, at 2,403,831 to 2,404,310 _02329 MPMX26_02330: MPMX26_02330 - Adenine phosphoribosyltransferase, at 2,404,337 to 2,404,879 _02330 Position (kb) 2403 2404 2405Strain fitness (log2 ratio) -1 0 1at 2403.629 kb on - strandat 2403.640 kb on - strandat 2403.861 kb on + strandat 2403.913 kb on + strand, within MPMX26_02329at 2403.995 kb on + strand, within MPMX26_02329at 2403.997 kb on + strand, within MPMX26_02329at 2403.999 kb on - strand, within MPMX26_02329at 2404.050 kb on - strand, within MPMX26_02329at 2404.144 kb on + strand, within MPMX26_02329at 2404.152 kb on - strand, within MPMX26_02329at 2404.152 kb on - strand, within MPMX26_02329at 2404.152 kb on - strand, within MPMX26_02329at 2404.154 kb on + strand, within MPMX26_02329at 2404.164 kb on + strand, within MPMX26_02329at 2404.166 kb on + strand, within MPMX26_02329at 2404.200 kb on - strand, within MPMX26_02329at 2404.210 kb on - strand, within MPMX26_02329at 2404.221 kb on + strand, within MPMX26_02329at 2404.221 kb on + strand, within MPMX26_02329at 2404.252 kb on - strand, within MPMX26_02329at 2404.287 kb on - strandat 2404.358 kb on - strandat 2404.368 kb on - strandat 2404.368 kb on - strandat 2404.368 kb on - strandat 2404.368 kb on - strandat 2404.368 kb on - strandat 2404.378 kb on - strandat 2404.378 kb on - strandat 2404.378 kb on - strandat 2404.378 kb on - strandat 2404.383 kb on - strandat 2404.383 kb on - strandat 2404.383 kb on - strandat 2404.402 kb on - strand, within MPMX26_02330at 2404.482 kb on - strand, within MPMX26_02330at 2404.482 kb on - strand, within MPMX26_02330at 2404.505 kb on - strand, within MPMX26_02330at 2404.537 kb on + strand, within MPMX26_02330at 2404.537 kb on + strand, within MPMX26_02330at 2404.573 kb on - strand, within MPMX26_02330at 2404.573 kb on - strand, within MPMX26_02330at 2404.573 kb on - strand, within MPMX26_02330at 2404.573 kb on - strand, within MPMX26_02330at 2404.573 kb on - strand, within MPMX26_02330at 2404.573 kb on - strand, within MPMX26_02330at 2404.576 kb on + strand, within MPMX26_02330at 2404.577 kb on - strand, within MPMX26_02330at 2404.582 kb on - strand, within MPMX26_02330at 2404.582 kb on - strand, within MPMX26_02330at 2404.582 kb on - strand, within MPMX26_02330at 2404.584 kb on - strand, within MPMX26_02330at 2404.584 kb on - strand, within MPMX26_02330at 2404.584 kb on - strand, within MPMX26_02330at 2404.584 kb on - strand, within MPMX26_02330at 2404.584 kb on - strand, within MPMX26_02330at 2404.584 kb on - strand, within MPMX26_02330at 2404.584 kb on - strand, within MPMX26_02330at 2404.596 kb on - strand, within MPMX26_02330at 2404.600 kb on + strand, within MPMX26_02330at 2404.608 kb on - strand, within MPMX26_02330at 2404.608 kb on - strand, within MPMX26_02330at 2404.631 kb on - strand, within MPMX26_02330at 2404.681 kb on - strand, within MPMX26_02330at 2404.686 kb on - strand, within MPMX26_02330at 2404.686 kb on - strand, within MPMX26_02330at 2404.717 kb on - strand, within MPMX26_02330at 2404.778 kb on - strand, within MPMX26_02330at 2404.792 kb on - strand, within MPMX26_02330at 2404.792 kb on - strand, within MPMX26_02330at 2404.832 kb on - strandat 2404.832 kb on - strandat 2404.837 kb on - strandat 2404.837 kb on - strandat 2404.837 kb on - strandat 2404.837 kb on - strandat 2404.837 kb on - strandat 2404.837 kb on - strandat 2404.837 kb on - strandat 2404.837 kb on - strandat 2404.859 kb on - strandat 2404.868 kb on - strandat 2404.882 kb on - strandat 2404.882 kb on - strandat 2404.882 kb on - strandat 2404.882 kb on - strandat 2405.290 kb on + strandat 2405.290 kb on + strandat 2405.301 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Ethanolamine (N)
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2,403,629 - +0.1
2,403,640 - +0.6
2,403,861 + +0.2
2,403,913 + MPMX26_02329 0.17 +1.7
2,403,995 + MPMX26_02329 0.34 -0.6
2,403,997 + MPMX26_02329 0.35 -0.3
2,403,999 - MPMX26_02329 0.35 +1.1
2,404,050 - MPMX26_02329 0.46 +0.7
2,404,144 + MPMX26_02329 0.65 +0.1
2,404,152 - MPMX26_02329 0.67 +0.5
2,404,152 - MPMX26_02329 0.67 +0.2
2,404,152 - MPMX26_02329 0.67 +0.9
2,404,154 + MPMX26_02329 0.67 +1.2
2,404,164 + MPMX26_02329 0.69 +0.2
2,404,166 + MPMX26_02329 0.70 +0.1
2,404,200 - MPMX26_02329 0.77 +0.8
2,404,210 - MPMX26_02329 0.79 -0.1
2,404,221 + MPMX26_02329 0.81 +1.3
2,404,221 + MPMX26_02329 0.81 +0.8
2,404,252 - MPMX26_02329 0.88 +0.4
2,404,287 - +0.2
2,404,358 - +0.2
2,404,368 - -0.2
2,404,368 - +0.3
2,404,368 - +0.1
2,404,368 - -0.3
2,404,368 - +0.0
2,404,378 - -0.2
2,404,378 - -0.0
2,404,378 - -0.1
2,404,378 - +0.2
2,404,383 - +1.2
2,404,383 - -0.1
2,404,383 - -0.3
2,404,402 - MPMX26_02330 0.12 +0.5
2,404,482 - MPMX26_02330 0.27 -0.2
2,404,482 - MPMX26_02330 0.27 +0.0
2,404,505 - MPMX26_02330 0.31 +0.0
2,404,537 + MPMX26_02330 0.37 -0.0
2,404,537 + MPMX26_02330 0.37 -0.4
2,404,573 - MPMX26_02330 0.43 +0.2
2,404,573 - MPMX26_02330 0.43 +0.2
2,404,573 - MPMX26_02330 0.43 +0.2
2,404,573 - MPMX26_02330 0.43 +1.0
2,404,573 - MPMX26_02330 0.43 +0.2
2,404,573 - MPMX26_02330 0.43 -0.0
2,404,576 + MPMX26_02330 0.44 -0.2
2,404,577 - MPMX26_02330 0.44 -0.2
2,404,582 - MPMX26_02330 0.45 +0.1
2,404,582 - MPMX26_02330 0.45 -0.2
2,404,582 - MPMX26_02330 0.45 +0.1
2,404,584 - MPMX26_02330 0.45 -0.2
2,404,584 - MPMX26_02330 0.45 +0.2
2,404,584 - MPMX26_02330 0.45 +0.4
2,404,584 - MPMX26_02330 0.45 +0.2
2,404,584 - MPMX26_02330 0.45 -0.3
2,404,584 - MPMX26_02330 0.45 +0.7
2,404,584 - MPMX26_02330 0.45 -0.2
2,404,596 - MPMX26_02330 0.48 +0.4
2,404,600 + MPMX26_02330 0.48 -0.3
2,404,608 - MPMX26_02330 0.50 -0.4
2,404,608 - MPMX26_02330 0.50 +0.1
2,404,631 - MPMX26_02330 0.54 +0.1
2,404,681 - MPMX26_02330 0.63 -0.2
2,404,686 - MPMX26_02330 0.64 +0.5
2,404,686 - MPMX26_02330 0.64 +0.3
2,404,717 - MPMX26_02330 0.70 +0.2
2,404,778 - MPMX26_02330 0.81 +0.1
2,404,792 - MPMX26_02330 0.84 -0.3
2,404,792 - MPMX26_02330 0.84 +0.2
2,404,832 - +0.7
2,404,832 - +0.9
2,404,837 - +0.4
2,404,837 - -0.0
2,404,837 - -0.3
2,404,837 - +0.7
2,404,837 - -0.2
2,404,837 - +0.2
2,404,837 - +0.2
2,404,837 - -0.7
2,404,859 - -0.1
2,404,868 - -0.3
2,404,882 - -0.3
2,404,882 - -0.1
2,404,882 - -0.0
2,404,882 - +0.4
2,405,290 + +0.0
2,405,290 + +0.0
2,405,301 + +0.0

Or see this region's nucleotide sequence