Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02303

Experiment: Ethanolamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02302 and MPMX26_02303 are separated by 158 nucleotidesMPMX26_02303 and MPMX26_02304 are separated by 67 nucleotides MPMX26_02302: MPMX26_02302 - 4,5-DOPA dioxygenase extradiol, at 2,373,177 to 2,373,953 _02302 MPMX26_02303: MPMX26_02303 - hypothetical protein, at 2,374,112 to 2,375,215 _02303 MPMX26_02304: MPMX26_02304 - NADP-specific glutamate dehydrogenase, at 2,375,283 to 2,376,626 _02304 Position (kb) 2374 2375 2376Strain fitness (log2 ratio) -1 0 1at 2373.217 kb on + strandat 2373.248 kb on + strandat 2373.248 kb on + strandat 2373.248 kb on + strandat 2373.248 kb on + strandat 2373.248 kb on + strandat 2373.258 kb on + strand, within MPMX26_02302at 2373.258 kb on + strand, within MPMX26_02302at 2373.258 kb on + strand, within MPMX26_02302at 2373.267 kb on + strand, within MPMX26_02302at 2373.282 kb on - strand, within MPMX26_02302at 2373.327 kb on + strand, within MPMX26_02302at 2373.425 kb on + strand, within MPMX26_02302at 2373.486 kb on + strand, within MPMX26_02302at 2373.509 kb on + strand, within MPMX26_02302at 2373.528 kb on + strand, within MPMX26_02302at 2373.539 kb on + strand, within MPMX26_02302at 2373.587 kb on + strand, within MPMX26_02302at 2373.624 kb on + strand, within MPMX26_02302at 2373.624 kb on + strand, within MPMX26_02302at 2373.624 kb on + strand, within MPMX26_02302at 2373.628 kb on + strand, within MPMX26_02302at 2373.693 kb on + strand, within MPMX26_02302at 2373.707 kb on + strand, within MPMX26_02302at 2373.725 kb on + strand, within MPMX26_02302at 2373.792 kb on + strand, within MPMX26_02302at 2373.792 kb on + strand, within MPMX26_02302at 2373.812 kb on + strand, within MPMX26_02302at 2373.812 kb on + strand, within MPMX26_02302at 2373.812 kb on + strand, within MPMX26_02302at 2373.812 kb on + strand, within MPMX26_02302at 2373.827 kb on + strand, within MPMX26_02302at 2373.870 kb on + strand, within MPMX26_02302at 2374.161 kb on + strandat 2374.172 kb on + strandat 2374.210 kb on + strandat 2374.210 kb on + strandat 2374.215 kb on + strandat 2374.220 kb on + strandat 2374.220 kb on + strandat 2374.220 kb on + strandat 2374.228 kb on + strand, within MPMX26_02303at 2374.228 kb on + strand, within MPMX26_02303at 2374.228 kb on + strand, within MPMX26_02303at 2374.235 kb on + strand, within MPMX26_02303at 2374.240 kb on + strand, within MPMX26_02303at 2374.240 kb on + strand, within MPMX26_02303at 2374.313 kb on + strand, within MPMX26_02303at 2374.322 kb on + strand, within MPMX26_02303at 2374.322 kb on + strand, within MPMX26_02303at 2374.369 kb on + strand, within MPMX26_02303at 2374.374 kb on + strand, within MPMX26_02303at 2374.374 kb on + strand, within MPMX26_02303at 2374.374 kb on + strand, within MPMX26_02303at 2374.433 kb on + strand, within MPMX26_02303at 2374.435 kb on + strand, within MPMX26_02303at 2374.445 kb on + strand, within MPMX26_02303at 2374.490 kb on + strand, within MPMX26_02303at 2374.490 kb on + strand, within MPMX26_02303at 2374.499 kb on + strand, within MPMX26_02303at 2374.597 kb on + strand, within MPMX26_02303at 2374.605 kb on + strand, within MPMX26_02303at 2374.605 kb on + strand, within MPMX26_02303at 2374.614 kb on + strand, within MPMX26_02303at 2374.675 kb on + strand, within MPMX26_02303at 2374.675 kb on + strand, within MPMX26_02303at 2374.705 kb on + strand, within MPMX26_02303at 2374.705 kb on + strand, within MPMX26_02303at 2374.705 kb on + strand, within MPMX26_02303at 2374.705 kb on + strand, within MPMX26_02303at 2374.705 kb on + strand, within MPMX26_02303at 2374.735 kb on + strand, within MPMX26_02303at 2374.735 kb on + strand, within MPMX26_02303at 2374.827 kb on + strand, within MPMX26_02303at 2374.827 kb on + strand, within MPMX26_02303at 2374.836 kb on + strand, within MPMX26_02303at 2374.865 kb on + strand, within MPMX26_02303at 2374.865 kb on + strand, within MPMX26_02303at 2374.870 kb on + strand, within MPMX26_02303at 2374.885 kb on + strand, within MPMX26_02303at 2374.897 kb on + strand, within MPMX26_02303at 2374.911 kb on + strand, within MPMX26_02303at 2374.952 kb on + strand, within MPMX26_02303at 2374.979 kb on + strand, within MPMX26_02303at 2374.979 kb on + strand, within MPMX26_02303at 2374.979 kb on + strand, within MPMX26_02303at 2374.979 kb on + strand, within MPMX26_02303at 2374.979 kb on + strand, within MPMX26_02303at 2374.979 kb on + strand, within MPMX26_02303at 2375.047 kb on + strand, within MPMX26_02303at 2375.079 kb on + strand, within MPMX26_02303at 2375.091 kb on + strand, within MPMX26_02303at 2375.091 kb on + strand, within MPMX26_02303at 2375.091 kb on + strand, within MPMX26_02303at 2375.091 kb on + strand, within MPMX26_02303at 2375.116 kb on + strandat 2375.176 kb on + strandat 2375.176 kb on + strandat 2375.184 kb on + strandat 2375.184 kb on + strandat 2375.184 kb on + strandat 2375.344 kb on - strandat 2375.348 kb on - strandat 2375.392 kb on - strandat 2375.402 kb on - strandat 2375.436 kb on - strand, within MPMX26_02304at 2375.440 kb on - strand, within MPMX26_02304at 2375.449 kb on - strand, within MPMX26_02304at 2375.449 kb on - strand, within MPMX26_02304at 2375.449 kb on - strand, within MPMX26_02304at 2375.456 kb on - strand, within MPMX26_02304at 2375.456 kb on - strand, within MPMX26_02304at 2375.461 kb on - strand, within MPMX26_02304at 2375.488 kb on - strand, within MPMX26_02304at 2375.558 kb on - strand, within MPMX26_02304at 2375.564 kb on - strand, within MPMX26_02304at 2375.564 kb on - strand, within MPMX26_02304at 2375.564 kb on - strand, within MPMX26_02304at 2375.564 kb on - strand, within MPMX26_02304at 2375.564 kb on - strand, within MPMX26_02304at 2375.564 kb on - strand, within MPMX26_02304at 2375.574 kb on - strand, within MPMX26_02304at 2375.574 kb on - strand, within MPMX26_02304at 2375.581 kb on - strand, within MPMX26_02304at 2375.581 kb on - strand, within MPMX26_02304at 2375.581 kb on - strand, within MPMX26_02304at 2375.581 kb on - strand, within MPMX26_02304at 2375.582 kb on - strand, within MPMX26_02304at 2375.582 kb on - strand, within MPMX26_02304at 2375.605 kb on - strand, within MPMX26_02304at 2375.622 kb on - strand, within MPMX26_02304at 2375.633 kb on - strand, within MPMX26_02304at 2375.633 kb on - strand, within MPMX26_02304at 2375.644 kb on - strand, within MPMX26_02304at 2375.668 kb on - strand, within MPMX26_02304at 2375.668 kb on - strand, within MPMX26_02304at 2375.668 kb on - strand, within MPMX26_02304at 2375.668 kb on - strand, within MPMX26_02304at 2375.668 kb on - strand, within MPMX26_02304at 2375.673 kb on - strand, within MPMX26_02304at 2375.673 kb on - strand, within MPMX26_02304at 2375.673 kb on - strand, within MPMX26_02304at 2375.673 kb on - strand, within MPMX26_02304at 2375.673 kb on - strand, within MPMX26_02304at 2375.673 kb on - strand, within MPMX26_02304at 2375.673 kb on - strand, within MPMX26_02304at 2375.673 kb on - strand, within MPMX26_02304at 2375.673 kb on - strand, within MPMX26_02304at 2375.673 kb on - strand, within MPMX26_02304at 2375.673 kb on - strand, within MPMX26_02304at 2375.688 kb on - strand, within MPMX26_02304at 2375.695 kb on - strand, within MPMX26_02304at 2375.763 kb on - strand, within MPMX26_02304at 2375.787 kb on - strand, within MPMX26_02304at 2375.787 kb on - strand, within MPMX26_02304at 2375.833 kb on - strand, within MPMX26_02304at 2375.833 kb on - strand, within MPMX26_02304at 2375.838 kb on - strand, within MPMX26_02304at 2375.838 kb on - strand, within MPMX26_02304at 2375.857 kb on - strand, within MPMX26_02304at 2375.858 kb on - strand, within MPMX26_02304at 2375.858 kb on - strand, within MPMX26_02304at 2375.858 kb on - strand, within MPMX26_02304at 2375.874 kb on - strand, within MPMX26_02304at 2375.874 kb on - strand, within MPMX26_02304at 2375.881 kb on - strand, within MPMX26_02304at 2375.886 kb on - strand, within MPMX26_02304at 2375.900 kb on - strand, within MPMX26_02304at 2375.937 kb on - strand, within MPMX26_02304at 2375.945 kb on - strand, within MPMX26_02304at 2375.989 kb on - strand, within MPMX26_02304at 2376.003 kb on - strand, within MPMX26_02304at 2376.009 kb on - strand, within MPMX26_02304at 2376.009 kb on - strand, within MPMX26_02304at 2376.010 kb on - strand, within MPMX26_02304at 2376.020 kb on - strand, within MPMX26_02304at 2376.053 kb on - strand, within MPMX26_02304at 2376.053 kb on - strand, within MPMX26_02304at 2376.053 kb on - strand, within MPMX26_02304at 2376.063 kb on - strand, within MPMX26_02304at 2376.102 kb on - strand, within MPMX26_02304at 2376.104 kb on - strand, within MPMX26_02304at 2376.106 kb on - strand, within MPMX26_02304at 2376.106 kb on - strand, within MPMX26_02304at 2376.126 kb on - strand, within MPMX26_02304at 2376.185 kb on - strand, within MPMX26_02304at 2376.209 kb on - strand, within MPMX26_02304

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Per-strain Table

Position Strand Gene LocusTag Fraction Ethanolamine (N)
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2,373,217 + +0.4
2,373,248 + +0.9
2,373,248 + +0.3
2,373,248 + -0.2
2,373,248 + +0.2
2,373,248 + +0.4
2,373,258 + MPMX26_02302 0.10 +0.0
2,373,258 + MPMX26_02302 0.10 -0.0
2,373,258 + MPMX26_02302 0.10 +1.7
2,373,267 + MPMX26_02302 0.12 -0.0
2,373,282 - MPMX26_02302 0.14 -0.4
2,373,327 + MPMX26_02302 0.19 +0.5
2,373,425 + MPMX26_02302 0.32 +0.2
2,373,486 + MPMX26_02302 0.40 +0.0
2,373,509 + MPMX26_02302 0.43 -0.5
2,373,528 + MPMX26_02302 0.45 -0.2
2,373,539 + MPMX26_02302 0.47 -0.2
2,373,587 + MPMX26_02302 0.53 +0.7
2,373,624 + MPMX26_02302 0.58 -0.3
2,373,624 + MPMX26_02302 0.58 +0.0
2,373,624 + MPMX26_02302 0.58 +0.2
2,373,628 + MPMX26_02302 0.58 -1.1
2,373,693 + MPMX26_02302 0.66 -0.1
2,373,707 + MPMX26_02302 0.68 -0.3
2,373,725 + MPMX26_02302 0.71 +0.0
2,373,792 + MPMX26_02302 0.79 -0.0
2,373,792 + MPMX26_02302 0.79 -0.3
2,373,812 + MPMX26_02302 0.82 +0.1
2,373,812 + MPMX26_02302 0.82 +0.5
2,373,812 + MPMX26_02302 0.82 -0.1
2,373,812 + MPMX26_02302 0.82 +0.6
2,373,827 + MPMX26_02302 0.84 +0.1
2,373,870 + MPMX26_02302 0.89 -0.3
2,374,161 + +0.1
2,374,172 + +0.4
2,374,210 + +0.8
2,374,210 + -0.1
2,374,215 + +0.1
2,374,220 + +0.9
2,374,220 + -0.1
2,374,220 + +0.1
2,374,228 + MPMX26_02303 0.11 +0.8
2,374,228 + MPMX26_02303 0.11 -0.1
2,374,228 + MPMX26_02303 0.11 -0.2
2,374,235 + MPMX26_02303 0.11 -0.2
2,374,240 + MPMX26_02303 0.12 -0.1
2,374,240 + MPMX26_02303 0.12 +0.1
2,374,313 + MPMX26_02303 0.18 +0.4
2,374,322 + MPMX26_02303 0.19 +0.9
2,374,322 + MPMX26_02303 0.19 +0.2
2,374,369 + MPMX26_02303 0.23 -0.1
2,374,374 + MPMX26_02303 0.24 +0.3
2,374,374 + MPMX26_02303 0.24 +0.3
2,374,374 + MPMX26_02303 0.24 +0.5
2,374,433 + MPMX26_02303 0.29 +0.4
2,374,435 + MPMX26_02303 0.29 +0.4
2,374,445 + MPMX26_02303 0.30 +0.1
2,374,490 + MPMX26_02303 0.34 +1.6
2,374,490 + MPMX26_02303 0.34 +0.6
2,374,499 + MPMX26_02303 0.35 +0.6
2,374,597 + MPMX26_02303 0.44 -0.2
2,374,605 + MPMX26_02303 0.45 -0.1
2,374,605 + MPMX26_02303 0.45 +0.3
2,374,614 + MPMX26_02303 0.45 +0.2
2,374,675 + MPMX26_02303 0.51 +0.0
2,374,675 + MPMX26_02303 0.51 +0.2
2,374,705 + MPMX26_02303 0.54 +0.3
2,374,705 + MPMX26_02303 0.54 -0.1
2,374,705 + MPMX26_02303 0.54 -0.1
2,374,705 + MPMX26_02303 0.54 -0.0
2,374,705 + MPMX26_02303 0.54 +0.1
2,374,735 + MPMX26_02303 0.56 +0.0
2,374,735 + MPMX26_02303 0.56 +0.3
2,374,827 + MPMX26_02303 0.65 +0.5
2,374,827 + MPMX26_02303 0.65 -0.5
2,374,836 + MPMX26_02303 0.66 -0.6
2,374,865 + MPMX26_02303 0.68 +0.1
2,374,865 + MPMX26_02303 0.68 -0.1
2,374,870 + MPMX26_02303 0.69 +0.2
2,374,885 + MPMX26_02303 0.70 +0.6
2,374,897 + MPMX26_02303 0.71 -0.0
2,374,911 + MPMX26_02303 0.72 +0.1
2,374,952 + MPMX26_02303 0.76 -0.0
2,374,979 + MPMX26_02303 0.79 +0.2
2,374,979 + MPMX26_02303 0.79 +0.1
2,374,979 + MPMX26_02303 0.79 -0.2
2,374,979 + MPMX26_02303 0.79 +0.8
2,374,979 + MPMX26_02303 0.79 +0.1
2,374,979 + MPMX26_02303 0.79 -0.2
2,375,047 + MPMX26_02303 0.85 +0.2
2,375,079 + MPMX26_02303 0.88 -0.4
2,375,091 + MPMX26_02303 0.89 -0.7
2,375,091 + MPMX26_02303 0.89 -0.1
2,375,091 + MPMX26_02303 0.89 +0.4
2,375,091 + MPMX26_02303 0.89 -0.3
2,375,116 + +0.2
2,375,176 + -0.1
2,375,176 + +0.1
2,375,184 + -0.2
2,375,184 + +0.2
2,375,184 + +0.1
2,375,344 - +0.3
2,375,348 - +0.4
2,375,392 - +0.0
2,375,402 - -0.0
2,375,436 - MPMX26_02304 0.11 -0.1
2,375,440 - MPMX26_02304 0.12 +0.2
2,375,449 - MPMX26_02304 0.12 -0.1
2,375,449 - MPMX26_02304 0.12 -0.5
2,375,449 - MPMX26_02304 0.12 -0.1
2,375,456 - MPMX26_02304 0.13 -0.0
2,375,456 - MPMX26_02304 0.13 +0.1
2,375,461 - MPMX26_02304 0.13 +0.2
2,375,488 - MPMX26_02304 0.15 -0.1
2,375,558 - MPMX26_02304 0.20 -0.7
2,375,564 - MPMX26_02304 0.21 +0.2
2,375,564 - MPMX26_02304 0.21 +0.0
2,375,564 - MPMX26_02304 0.21 +0.3
2,375,564 - MPMX26_02304 0.21 +0.2
2,375,564 - MPMX26_02304 0.21 -0.1
2,375,564 - MPMX26_02304 0.21 +0.9
2,375,574 - MPMX26_02304 0.22 +0.4
2,375,574 - MPMX26_02304 0.22 +0.8
2,375,581 - MPMX26_02304 0.22 -0.4
2,375,581 - MPMX26_02304 0.22 -0.2
2,375,581 - MPMX26_02304 0.22 +0.6
2,375,581 - MPMX26_02304 0.22 +0.5
2,375,582 - MPMX26_02304 0.22 +0.1
2,375,582 - MPMX26_02304 0.22 +0.0
2,375,605 - MPMX26_02304 0.24 -0.1
2,375,622 - MPMX26_02304 0.25 +0.1
2,375,633 - MPMX26_02304 0.26 +0.3
2,375,633 - MPMX26_02304 0.26 -0.8
2,375,644 - MPMX26_02304 0.27 +0.4
2,375,668 - MPMX26_02304 0.29 +0.1
2,375,668 - MPMX26_02304 0.29 -0.2
2,375,668 - MPMX26_02304 0.29 +0.1
2,375,668 - MPMX26_02304 0.29 +0.3
2,375,668 - MPMX26_02304 0.29 -0.2
2,375,673 - MPMX26_02304 0.29 -0.3
2,375,673 - MPMX26_02304 0.29 -0.1
2,375,673 - MPMX26_02304 0.29 -0.0
2,375,673 - MPMX26_02304 0.29 +0.2
2,375,673 - MPMX26_02304 0.29 +0.1
2,375,673 - MPMX26_02304 0.29 +0.3
2,375,673 - MPMX26_02304 0.29 -0.3
2,375,673 - MPMX26_02304 0.29 -0.4
2,375,673 - MPMX26_02304 0.29 -0.2
2,375,673 - MPMX26_02304 0.29 +0.1
2,375,673 - MPMX26_02304 0.29 +0.0
2,375,688 - MPMX26_02304 0.30 -1.0
2,375,695 - MPMX26_02304 0.31 -0.2
2,375,763 - MPMX26_02304 0.36 -0.5
2,375,787 - MPMX26_02304 0.38 -0.3
2,375,787 - MPMX26_02304 0.38 +0.1
2,375,833 - MPMX26_02304 0.41 +0.0
2,375,833 - MPMX26_02304 0.41 -0.3
2,375,838 - MPMX26_02304 0.41 +0.4
2,375,838 - MPMX26_02304 0.41 +0.1
2,375,857 - MPMX26_02304 0.43 -0.1
2,375,858 - MPMX26_02304 0.43 -0.1
2,375,858 - MPMX26_02304 0.43 +0.0
2,375,858 - MPMX26_02304 0.43 +0.2
2,375,874 - MPMX26_02304 0.44 +0.1
2,375,874 - MPMX26_02304 0.44 -0.1
2,375,881 - MPMX26_02304 0.44 -0.0
2,375,886 - MPMX26_02304 0.45 +0.0
2,375,900 - MPMX26_02304 0.46 +0.1
2,375,937 - MPMX26_02304 0.49 +0.1
2,375,945 - MPMX26_02304 0.49 -0.4
2,375,989 - MPMX26_02304 0.53 -0.1
2,376,003 - MPMX26_02304 0.54 +0.3
2,376,009 - MPMX26_02304 0.54 -0.1
2,376,009 - MPMX26_02304 0.54 +0.3
2,376,010 - MPMX26_02304 0.54 -0.1
2,376,020 - MPMX26_02304 0.55 -1.0
2,376,053 - MPMX26_02304 0.57 -0.6
2,376,053 - MPMX26_02304 0.57 -0.3
2,376,053 - MPMX26_02304 0.57 +0.3
2,376,063 - MPMX26_02304 0.58 -0.0
2,376,102 - MPMX26_02304 0.61 +0.5
2,376,104 - MPMX26_02304 0.61 -0.1
2,376,106 - MPMX26_02304 0.61 +0.0
2,376,106 - MPMX26_02304 0.61 -0.0
2,376,126 - MPMX26_02304 0.63 -0.4
2,376,185 - MPMX26_02304 0.67 +0.1
2,376,209 - MPMX26_02304 0.69 +0.0

Or see this region's nucleotide sequence