Experiment: Ethanolamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02144 and MPMX26_02145 are separated by 49 nucleotides MPMX26_02145 and MPMX26_02146 are separated by 212 nucleotides
MPMX26_02144: MPMX26_02144 - hypothetical protein, at 2,202,865 to 2,204,298
_02144
MPMX26_02145: MPMX26_02145 - hypothetical protein, at 2,204,348 to 2,204,515
_02145
MPMX26_02146: MPMX26_02146 - Aspartate/prephenate aminotransferase, at 2,204,728 to 2,205,963
_02146
Position (kb)
2204
2205 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 2203.402 kb on + strand, within MPMX26_02144 at 2203.500 kb on + strand, within MPMX26_02144 at 2203.540 kb on + strand, within MPMX26_02144 at 2203.540 kb on + strand, within MPMX26_02144 at 2203.540 kb on + strand, within MPMX26_02144 at 2203.540 kb on + strand, within MPMX26_02144 at 2203.540 kb on + strand, within MPMX26_02144 at 2203.540 kb on + strand, within MPMX26_02144 at 2203.540 kb on + strand, within MPMX26_02144 at 2203.551 kb on + strand, within MPMX26_02144 at 2203.615 kb on + strand, within MPMX26_02144 at 2203.615 kb on + strand, within MPMX26_02144 at 2203.633 kb on + strand, within MPMX26_02144 at 2203.693 kb on + strand, within MPMX26_02144 at 2203.753 kb on + strand, within MPMX26_02144 at 2203.832 kb on + strand, within MPMX26_02144 at 2203.832 kb on + strand, within MPMX26_02144 at 2203.851 kb on + strand, within MPMX26_02144 at 2203.896 kb on + strand, within MPMX26_02144 at 2203.933 kb on + strand, within MPMX26_02144 at 2203.969 kb on + strand, within MPMX26_02144 at 2203.990 kb on + strand, within MPMX26_02144 at 2203.990 kb on + strand, within MPMX26_02144 at 2204.002 kb on + strand, within MPMX26_02144 at 2204.037 kb on + strand, within MPMX26_02144 at 2204.139 kb on + strand, within MPMX26_02144 at 2204.139 kb on + strand, within MPMX26_02144 at 2204.157 kb on + strand at 2204.197 kb on + strand at 2204.197 kb on + strand at 2204.205 kb on - strand at 2204.227 kb on - strand at 2204.248 kb on + strand at 2204.248 kb on - strand at 2204.253 kb on - strand at 2204.305 kb on - strand at 2204.305 kb on - strand at 2204.315 kb on - strand at 2204.315 kb on - strand at 2204.315 kb on - strand at 2204.315 kb on - strand at 2204.364 kb on - strand at 2204.369 kb on - strand, within MPMX26_02145 at 2204.386 kb on - strand, within MPMX26_02145 at 2204.391 kb on - strand, within MPMX26_02145 at 2204.396 kb on - strand, within MPMX26_02145 at 2204.416 kb on - strand, within MPMX26_02145 at 2204.440 kb on - strand, within MPMX26_02145 at 2204.440 kb on - strand, within MPMX26_02145 at 2204.452 kb on - strand, within MPMX26_02145 at 2204.492 kb on - strand, within MPMX26_02145 at 2204.517 kb on - strand at 2204.517 kb on - strand at 2204.731 kb on + strand at 2204.738 kb on + strand at 2204.771 kb on + strand at 2204.805 kb on + strand at 2204.805 kb on + strand at 2204.805 kb on + strand at 2204.805 kb on + strand at 2204.805 kb on + strand at 2204.839 kb on + strand at 2204.840 kb on + strand at 2204.845 kb on + strand at 2204.864 kb on + strand, within MPMX26_02146 at 2204.864 kb on + strand, within MPMX26_02146 at 2204.864 kb on + strand, within MPMX26_02146 at 2204.864 kb on + strand, within MPMX26_02146 at 2204.866 kb on + strand, within MPMX26_02146 at 2204.866 kb on + strand, within MPMX26_02146 at 2204.866 kb on + strand, within MPMX26_02146 at 2204.866 kb on + strand, within MPMX26_02146 at 2204.866 kb on + strand, within MPMX26_02146 at 2204.866 kb on + strand, within MPMX26_02146 at 2204.874 kb on + strand, within MPMX26_02146 at 2204.874 kb on + strand, within MPMX26_02146 at 2204.901 kb on + strand, within MPMX26_02146 at 2204.970 kb on + strand, within MPMX26_02146 at 2204.970 kb on + strand, within MPMX26_02146 at 2204.970 kb on + strand, within MPMX26_02146 at 2204.978 kb on - strand, within MPMX26_02146 at 2205.028 kb on + strand, within MPMX26_02146 at 2205.028 kb on + strand, within MPMX26_02146 at 2205.089 kb on + strand, within MPMX26_02146 at 2205.164 kb on + strand, within MPMX26_02146 at 2205.188 kb on + strand, within MPMX26_02146 at 2205.188 kb on + strand, within MPMX26_02146 at 2205.198 kb on + strand, within MPMX26_02146 at 2205.235 kb on + strand, within MPMX26_02146 at 2205.240 kb on + strand, within MPMX26_02146 at 2205.247 kb on + strand, within MPMX26_02146 at 2205.247 kb on + strand, within MPMX26_02146 at 2205.262 kb on + strand, within MPMX26_02146 at 2205.293 kb on + strand, within MPMX26_02146 at 2205.293 kb on + strand, within MPMX26_02146 at 2205.404 kb on + strand, within MPMX26_02146 at 2205.438 kb on + strand, within MPMX26_02146 at 2205.438 kb on + strand, within MPMX26_02146 at 2205.472 kb on + strand, within MPMX26_02146 at 2205.498 kb on + strand, within MPMX26_02146 at 2205.498 kb on + strand, within MPMX26_02146
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanolamine (N) remove 2,203,402 + MPMX26_02144 0.37 +0.5 2,203,500 + MPMX26_02144 0.44 +0.9 2,203,540 + MPMX26_02144 0.47 +0.4 2,203,540 + MPMX26_02144 0.47 -0.6 2,203,540 + MPMX26_02144 0.47 -0.1 2,203,540 + MPMX26_02144 0.47 -0.0 2,203,540 + MPMX26_02144 0.47 +0.0 2,203,540 + MPMX26_02144 0.47 -0.1 2,203,540 + MPMX26_02144 0.47 -0.0 2,203,551 + MPMX26_02144 0.48 -0.6 2,203,615 + MPMX26_02144 0.52 -0.6 2,203,615 + MPMX26_02144 0.52 +0.0 2,203,633 + MPMX26_02144 0.54 -1.7 2,203,693 + MPMX26_02144 0.58 -0.1 2,203,753 + MPMX26_02144 0.62 -0.2 2,203,832 + MPMX26_02144 0.67 -0.6 2,203,832 + MPMX26_02144 0.67 -0.3 2,203,851 + MPMX26_02144 0.69 -0.2 2,203,896 + MPMX26_02144 0.72 -0.3 2,203,933 + MPMX26_02144 0.74 +0.6 2,203,969 + MPMX26_02144 0.77 +0.6 2,203,990 + MPMX26_02144 0.78 +0.1 2,203,990 + MPMX26_02144 0.78 +0.2 2,204,002 + MPMX26_02144 0.79 +0.4 2,204,037 + MPMX26_02144 0.82 -0.1 2,204,139 + MPMX26_02144 0.89 +0.1 2,204,139 + MPMX26_02144 0.89 +0.8 2,204,157 + +0.6 2,204,197 + -0.8 2,204,197 + +0.3 2,204,205 - +0.7 2,204,227 - -0.9 2,204,248 + +0.3 2,204,248 - +0.2 2,204,253 - -0.0 2,204,305 - -1.1 2,204,305 - -0.3 2,204,315 - +0.0 2,204,315 - +0.2 2,204,315 - -0.2 2,204,315 - +0.1 2,204,364 - +0.1 2,204,369 - MPMX26_02145 0.12 -0.4 2,204,386 - MPMX26_02145 0.23 +0.1 2,204,391 - MPMX26_02145 0.26 +0.2 2,204,396 - MPMX26_02145 0.29 +0.2 2,204,416 - MPMX26_02145 0.40 +0.0 2,204,440 - MPMX26_02145 0.55 +0.2 2,204,440 - MPMX26_02145 0.55 +0.3 2,204,452 - MPMX26_02145 0.62 +0.2 2,204,492 - MPMX26_02145 0.86 +0.1 2,204,517 - -0.4 2,204,517 - -0.2 2,204,731 + -4.1 2,204,738 + -2.3 2,204,771 + -3.9 2,204,805 + -4.8 2,204,805 + -2.6 2,204,805 + -2.4 2,204,805 + -1.6 2,204,805 + -2.6 2,204,839 + -2.7 2,204,840 + -2.1 2,204,845 + -2.2 2,204,864 + MPMX26_02146 0.11 -4.7 2,204,864 + MPMX26_02146 0.11 -2.8 2,204,864 + MPMX26_02146 0.11 -3.5 2,204,864 + MPMX26_02146 0.11 -2.9 2,204,866 + MPMX26_02146 0.11 -3.6 2,204,866 + MPMX26_02146 0.11 -2.8 2,204,866 + MPMX26_02146 0.11 -3.1 2,204,866 + MPMX26_02146 0.11 -2.7 2,204,866 + MPMX26_02146 0.11 -2.4 2,204,866 + MPMX26_02146 0.11 -3.6 2,204,874 + MPMX26_02146 0.12 -2.6 2,204,874 + MPMX26_02146 0.12 -2.8 2,204,901 + MPMX26_02146 0.14 -2.8 2,204,970 + MPMX26_02146 0.20 -2.5 2,204,970 + MPMX26_02146 0.20 -2.6 2,204,970 + MPMX26_02146 0.20 -3.0 2,204,978 - MPMX26_02146 0.20 -0.5 2,205,028 + MPMX26_02146 0.24 -2.8 2,205,028 + MPMX26_02146 0.24 -3.5 2,205,089 + MPMX26_02146 0.29 -1.4 2,205,164 + MPMX26_02146 0.35 -2.3 2,205,188 + MPMX26_02146 0.37 -3.0 2,205,188 + MPMX26_02146 0.37 -2.8 2,205,198 + MPMX26_02146 0.38 -2.9 2,205,235 + MPMX26_02146 0.41 -4.0 2,205,240 + MPMX26_02146 0.41 -3.1 2,205,247 + MPMX26_02146 0.42 -2.6 2,205,247 + MPMX26_02146 0.42 -2.5 2,205,262 + MPMX26_02146 0.43 -2.5 2,205,293 + MPMX26_02146 0.46 -2.7 2,205,293 + MPMX26_02146 0.46 -4.6 2,205,404 + MPMX26_02146 0.55 -3.8 2,205,438 + MPMX26_02146 0.57 -3.8 2,205,438 + MPMX26_02146 0.57 -3.3 2,205,472 + MPMX26_02146 0.60 -2.4 2,205,498 + MPMX26_02146 0.62 -2.8 2,205,498 + MPMX26_02146 0.62 -4.0
Or see this region's nucleotide sequence