Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01953

Experiment: Ethanolamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01952 and MPMX26_01953 are separated by 20 nucleotides MPMX26_01952: MPMX26_01952 - hypothetical protein, at 2,003,141 to 2,004,196 _01952 MPMX26_01953: MPMX26_01953 - hypothetical protein, at 2,004,217 to 2,006,949 _01953 Position (kb) 2004 2005 2006 2007Strain fitness (log2 ratio) -1 0 1at 2003.470 kb on - strand, within MPMX26_01952at 2003.539 kb on - strand, within MPMX26_01952at 2003.989 kb on - strand, within MPMX26_01952at 2004.182 kb on - strandat 2004.478 kb on - strandat 2005.516 kb on - strand, within MPMX26_01953at 2005.527 kb on - strand, within MPMX26_01953at 2006.014 kb on - strand, within MPMX26_01953at 2006.019 kb on - strand, within MPMX26_01953at 2006.019 kb on - strand, within MPMX26_01953at 2006.025 kb on - strand, within MPMX26_01953at 2006.097 kb on - strand, within MPMX26_01953at 2006.112 kb on - strand, within MPMX26_01953at 2006.112 kb on - strand, within MPMX26_01953at 2006.112 kb on - strand, within MPMX26_01953at 2006.112 kb on - strand, within MPMX26_01953at 2006.112 kb on - strand, within MPMX26_01953at 2006.112 kb on - strand, within MPMX26_01953at 2006.112 kb on - strand, within MPMX26_01953at 2006.122 kb on - strand, within MPMX26_01953at 2006.122 kb on - strand, within MPMX26_01953at 2006.122 kb on - strand, within MPMX26_01953at 2006.130 kb on - strand, within MPMX26_01953at 2006.233 kb on - strand, within MPMX26_01953at 2006.267 kb on - strand, within MPMX26_01953at 2006.625 kb on - strand, within MPMX26_01953at 2006.642 kb on - strand, within MPMX26_01953at 2007.646 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Ethanolamine (N)
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2,003,470 - MPMX26_01952 0.31 +0.4
2,003,539 - MPMX26_01952 0.38 +0.8
2,003,989 - MPMX26_01952 0.80 +1.0
2,004,182 - -1.3
2,004,478 - -1.5
2,005,516 - MPMX26_01953 0.48 +1.0
2,005,527 - MPMX26_01953 0.48 -0.8
2,006,014 - MPMX26_01953 0.66 +0.2
2,006,019 - MPMX26_01953 0.66 +0.1
2,006,019 - MPMX26_01953 0.66 -0.3
2,006,025 - MPMX26_01953 0.66 +0.1
2,006,097 - MPMX26_01953 0.69 +1.0
2,006,112 - MPMX26_01953 0.69 -0.9
2,006,112 - MPMX26_01953 0.69 -0.9
2,006,112 - MPMX26_01953 0.69 -0.1
2,006,112 - MPMX26_01953 0.69 -1.0
2,006,112 - MPMX26_01953 0.69 -1.2
2,006,112 - MPMX26_01953 0.69 -0.3
2,006,112 - MPMX26_01953 0.69 -0.8
2,006,122 - MPMX26_01953 0.70 -0.8
2,006,122 - MPMX26_01953 0.70 -0.0
2,006,122 - MPMX26_01953 0.70 +0.2
2,006,130 - MPMX26_01953 0.70 +0.4
2,006,233 - MPMX26_01953 0.74 -0.4
2,006,267 - MPMX26_01953 0.75 +1.1
2,006,625 - MPMX26_01953 0.88 +0.4
2,006,642 - MPMX26_01953 0.89 -1.4
2,007,646 + -0.8

Or see this region's nucleotide sequence