Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01165

Experiment: Ethanolamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01164 and MPMX26_01165 are separated by 462 nucleotidesMPMX26_01165 and MPMX26_01166 are separated by 216 nucleotides MPMX26_01164: MPMX26_01164 - hypothetical protein, at 1,231,281 to 1,231,769 _01164 MPMX26_01165: MPMX26_01165 - hypothetical protein, at 1,232,232 to 1,232,489 _01165 MPMX26_01166: MPMX26_01166 - Phosphoenolpyruvate synthase, at 1,232,706 to 1,235,084 _01166 Position (kb) 1232 1233Strain fitness (log2 ratio) -1 0 1at 1231.277 kb on - strandat 1231.277 kb on - strandat 1231.286 kb on - strandat 1231.368 kb on - strand, within MPMX26_01164at 1231.376 kb on - strand, within MPMX26_01164at 1231.403 kb on - strand, within MPMX26_01164at 1231.403 kb on - strand, within MPMX26_01164at 1231.456 kb on - strand, within MPMX26_01164at 1231.456 kb on - strand, within MPMX26_01164at 1231.456 kb on - strand, within MPMX26_01164at 1231.466 kb on - strand, within MPMX26_01164at 1231.501 kb on - strand, within MPMX26_01164at 1231.511 kb on - strand, within MPMX26_01164at 1231.511 kb on - strand, within MPMX26_01164at 1231.511 kb on - strand, within MPMX26_01164at 1231.511 kb on - strand, within MPMX26_01164at 1231.527 kb on - strand, within MPMX26_01164at 1231.527 kb on - strand, within MPMX26_01164at 1231.527 kb on - strand, within MPMX26_01164at 1231.527 kb on - strand, within MPMX26_01164at 1231.527 kb on - strand, within MPMX26_01164at 1231.598 kb on - strand, within MPMX26_01164at 1231.598 kb on - strand, within MPMX26_01164at 1231.614 kb on - strand, within MPMX26_01164at 1231.642 kb on - strand, within MPMX26_01164at 1231.642 kb on - strand, within MPMX26_01164at 1231.674 kb on - strand, within MPMX26_01164at 1231.674 kb on - strand, within MPMX26_01164at 1231.679 kb on - strand, within MPMX26_01164at 1231.679 kb on - strand, within MPMX26_01164at 1231.684 kb on - strand, within MPMX26_01164at 1231.686 kb on - strand, within MPMX26_01164at 1231.696 kb on - strand, within MPMX26_01164at 1231.698 kb on - strand, within MPMX26_01164at 1231.698 kb on - strand, within MPMX26_01164at 1231.698 kb on - strand, within MPMX26_01164at 1231.698 kb on - strand, within MPMX26_01164at 1231.698 kb on - strand, within MPMX26_01164at 1231.698 kb on - strand, within MPMX26_01164at 1231.698 kb on - strand, within MPMX26_01164at 1231.698 kb on - strand, within MPMX26_01164at 1231.698 kb on - strand, within MPMX26_01164at 1231.710 kb on - strand, within MPMX26_01164at 1231.710 kb on - strand, within MPMX26_01164at 1231.710 kb on - strand, within MPMX26_01164at 1231.717 kb on - strand, within MPMX26_01164at 1231.728 kb on - strandat 1232.081 kb on + strandat 1232.181 kb on + strandat 1232.263 kb on + strand, within MPMX26_01165at 1232.263 kb on + strand, within MPMX26_01165at 1232.279 kb on + strand, within MPMX26_01165at 1232.281 kb on + strand, within MPMX26_01165at 1232.304 kb on + strand, within MPMX26_01165at 1232.384 kb on + strand, within MPMX26_01165at 1232.475 kb on + strandat 1232.589 kb on + strandat 1232.645 kb on + strandat 1232.645 kb on + strandat 1232.645 kb on + strandat 1232.645 kb on + strandat 1232.645 kb on + strandat 1232.747 kb on - strandat 1232.756 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Ethanolamine (N)
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1,231,277 - -0.2
1,231,277 - +1.4
1,231,286 - +0.3
1,231,368 - MPMX26_01164 0.18 -0.2
1,231,376 - MPMX26_01164 0.19 +0.2
1,231,403 - MPMX26_01164 0.25 +0.0
1,231,403 - MPMX26_01164 0.25 +0.1
1,231,456 - MPMX26_01164 0.36 -0.7
1,231,456 - MPMX26_01164 0.36 +0.4
1,231,456 - MPMX26_01164 0.36 +0.5
1,231,466 - MPMX26_01164 0.38 +0.5
1,231,501 - MPMX26_01164 0.45 +0.0
1,231,511 - MPMX26_01164 0.47 +0.4
1,231,511 - MPMX26_01164 0.47 -0.1
1,231,511 - MPMX26_01164 0.47 +0.2
1,231,511 - MPMX26_01164 0.47 -0.1
1,231,527 - MPMX26_01164 0.50 +0.0
1,231,527 - MPMX26_01164 0.50 +0.4
1,231,527 - MPMX26_01164 0.50 +0.4
1,231,527 - MPMX26_01164 0.50 -0.0
1,231,527 - MPMX26_01164 0.50 -0.4
1,231,598 - MPMX26_01164 0.65 -0.3
1,231,598 - MPMX26_01164 0.65 -1.3
1,231,614 - MPMX26_01164 0.68 +0.2
1,231,642 - MPMX26_01164 0.74 +0.2
1,231,642 - MPMX26_01164 0.74 +0.6
1,231,674 - MPMX26_01164 0.80 +0.1
1,231,674 - MPMX26_01164 0.80 +0.6
1,231,679 - MPMX26_01164 0.81 +0.1
1,231,679 - MPMX26_01164 0.81 +0.2
1,231,684 - MPMX26_01164 0.82 -0.2
1,231,686 - MPMX26_01164 0.83 -0.1
1,231,696 - MPMX26_01164 0.85 -0.1
1,231,698 - MPMX26_01164 0.85 +0.4
1,231,698 - MPMX26_01164 0.85 -1.7
1,231,698 - MPMX26_01164 0.85 -0.3
1,231,698 - MPMX26_01164 0.85 +0.2
1,231,698 - MPMX26_01164 0.85 +0.1
1,231,698 - MPMX26_01164 0.85 +0.1
1,231,698 - MPMX26_01164 0.85 +0.1
1,231,698 - MPMX26_01164 0.85 -0.5
1,231,698 - MPMX26_01164 0.85 +0.1
1,231,710 - MPMX26_01164 0.88 +0.5
1,231,710 - MPMX26_01164 0.88 +0.4
1,231,710 - MPMX26_01164 0.88 -0.6
1,231,717 - MPMX26_01164 0.89 -0.4
1,231,728 - +0.2
1,232,081 + +0.3
1,232,181 + +0.4
1,232,263 + MPMX26_01165 0.12 +0.4
1,232,263 + MPMX26_01165 0.12 +0.0
1,232,279 + MPMX26_01165 0.18 +0.0
1,232,281 + MPMX26_01165 0.19 +0.4
1,232,304 + MPMX26_01165 0.28 +0.5
1,232,384 + MPMX26_01165 0.59 +0.3
1,232,475 + +0.1
1,232,589 + +0.9
1,232,645 + +0.6
1,232,645 + +0.3
1,232,645 + +0.9
1,232,645 + +0.1
1,232,645 + -0.0
1,232,747 - -1.1
1,232,756 - -0.9

Or see this region's nucleotide sequence