Experiment: Ethanolamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01101 and MPMX26_01102 are separated by 293 nucleotides MPMX26_01102 and MPMX26_01103 are separated by 3 nucleotides MPMX26_01103 and MPMX26_01104 are separated by 49 nucleotides
MPMX26_01101: MPMX26_01101 - Peptidoglycan-associated lipoprotein, at 1,173,469 to 1,174,929
_01101
MPMX26_01102: MPMX26_01102 - hypothetical protein, at 1,175,223 to 1,176,245
_01102
MPMX26_01103: MPMX26_01103 - hypothetical protein, at 1,176,249 to 1,177,115
_01103
MPMX26_01104: MPMX26_01104 - Carboxy-S-adenosyl-L-methionine synthase, at 1,177,165 to 1,177,839
_01104
Position (kb) 1175
1176
1177 Strain fitness (log2 ratio) -1
0
1 at 1174.577 kb on + strand, within MPMX26_01101 at 1175.339 kb on + strand, within MPMX26_01102 at 1175.354 kb on + strand, within MPMX26_01102 at 1175.984 kb on + strand, within MPMX26_01102 at 1176.065 kb on + strand, within MPMX26_01102 at 1176.146 kb on + strand at 1176.177 kb on + strand at 1176.215 kb on + strand at 1176.372 kb on + strand, within MPMX26_01103 at 1176.911 kb on + strand, within MPMX26_01103 at 1177.029 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanolamine (N) remove 1,174,577 + MPMX26_01101 0.76 -0.6 1,175,339 + MPMX26_01102 0.11 -0.7 1,175,354 + MPMX26_01102 0.13 -1.5 1,175,984 + MPMX26_01102 0.74 +0.7 1,176,065 + MPMX26_01102 0.82 -1.7 1,176,146 + -1.0 1,176,177 + +0.8 1,176,215 + -0.4 1,176,372 + MPMX26_01103 0.14 -0.6 1,176,911 + MPMX26_01103 0.76 -1.0 1,177,029 + -0.6
Or see this region's nucleotide sequence