Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00621

Experiment: Ethanolamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00620 and MPMX26_00621 are separated by 386 nucleotidesMPMX26_00621 and MPMX26_00622 are separated by 612 nucleotides MPMX26_00620: MPMX26_00620 - Chloronitrobenzene nitroreductase, at 658,208 to 658,912 _00620 MPMX26_00621: MPMX26_00621 - hypothetical protein, at 659,299 to 660,654 _00621 MPMX26_00622: MPMX26_00622 - Sodium/glutamate symporter, at 661,267 to 662,502 _00622 Position (kb) 659 660 661Strain fitness (log2 ratio) -2 -1 0 1at 658.721 kb on - strand, within MPMX26_00620at 659.115 kb on + strandat 659.115 kb on + strandat 659.251 kb on + strandat 659.251 kb on + strandat 659.251 kb on + strandat 659.251 kb on + strandat 659.256 kb on + strandat 659.256 kb on + strandat 659.256 kb on + strandat 659.257 kb on + strandat 659.266 kb on + strandat 659.308 kb on + strandat 659.345 kb on + strandat 659.364 kb on + strandat 659.372 kb on + strandat 659.372 kb on + strandat 659.382 kb on + strandat 659.382 kb on + strandat 659.417 kb on + strandat 659.424 kb on + strandat 659.431 kb on + strandat 659.481 kb on + strand, within MPMX26_00621at 659.509 kb on + strand, within MPMX26_00621at 659.532 kb on + strand, within MPMX26_00621at 659.592 kb on + strand, within MPMX26_00621at 659.594 kb on + strand, within MPMX26_00621at 659.649 kb on + strand, within MPMX26_00621at 659.667 kb on + strand, within MPMX26_00621at 659.667 kb on + strand, within MPMX26_00621at 659.674 kb on + strand, within MPMX26_00621at 659.697 kb on + strand, within MPMX26_00621at 659.697 kb on + strand, within MPMX26_00621at 659.697 kb on + strand, within MPMX26_00621at 659.705 kb on + strand, within MPMX26_00621at 659.710 kb on + strand, within MPMX26_00621at 659.710 kb on + strand, within MPMX26_00621at 659.710 kb on + strand, within MPMX26_00621at 659.710 kb on + strand, within MPMX26_00621at 659.737 kb on + strand, within MPMX26_00621at 659.751 kb on + strand, within MPMX26_00621at 659.761 kb on + strand, within MPMX26_00621at 659.783 kb on + strand, within MPMX26_00621at 659.798 kb on + strand, within MPMX26_00621at 659.798 kb on + strand, within MPMX26_00621at 659.798 kb on + strand, within MPMX26_00621at 659.823 kb on + strand, within MPMX26_00621at 659.861 kb on + strand, within MPMX26_00621at 659.869 kb on + strand, within MPMX26_00621at 659.869 kb on + strand, within MPMX26_00621at 659.869 kb on + strand, within MPMX26_00621at 659.914 kb on + strand, within MPMX26_00621at 659.914 kb on + strand, within MPMX26_00621at 659.941 kb on + strand, within MPMX26_00621at 659.951 kb on + strand, within MPMX26_00621at 659.967 kb on + strand, within MPMX26_00621at 659.985 kb on + strand, within MPMX26_00621at 659.986 kb on + strand, within MPMX26_00621at 660.002 kb on + strand, within MPMX26_00621at 660.002 kb on + strand, within MPMX26_00621at 660.002 kb on + strand, within MPMX26_00621at 660.002 kb on + strand, within MPMX26_00621at 660.002 kb on + strand, within MPMX26_00621at 660.026 kb on + strand, within MPMX26_00621at 660.045 kb on + strand, within MPMX26_00621at 660.048 kb on + strand, within MPMX26_00621at 660.048 kb on + strand, within MPMX26_00621at 660.048 kb on + strand, within MPMX26_00621at 660.139 kb on + strand, within MPMX26_00621at 660.154 kb on + strand, within MPMX26_00621at 660.154 kb on + strand, within MPMX26_00621at 660.156 kb on + strand, within MPMX26_00621at 660.156 kb on + strand, within MPMX26_00621at 660.156 kb on + strand, within MPMX26_00621at 660.156 kb on + strand, within MPMX26_00621at 660.197 kb on + strand, within MPMX26_00621at 660.199 kb on + strand, within MPMX26_00621at 660.209 kb on + strand, within MPMX26_00621at 660.238 kb on + strand, within MPMX26_00621at 660.238 kb on + strand, within MPMX26_00621at 660.251 kb on + strand, within MPMX26_00621at 660.270 kb on + strand, within MPMX26_00621at 660.294 kb on + strand, within MPMX26_00621at 660.322 kb on + strand, within MPMX26_00621at 660.339 kb on + strand, within MPMX26_00621at 660.354 kb on + strand, within MPMX26_00621at 660.354 kb on + strand, within MPMX26_00621at 660.354 kb on + strand, within MPMX26_00621at 660.354 kb on + strand, within MPMX26_00621at 660.377 kb on + strand, within MPMX26_00621at 660.393 kb on + strand, within MPMX26_00621at 660.393 kb on + strand, within MPMX26_00621at 660.393 kb on + strand, within MPMX26_00621at 660.405 kb on + strand, within MPMX26_00621at 660.405 kb on + strand, within MPMX26_00621at 660.418 kb on + strand, within MPMX26_00621at 660.418 kb on + strand, within MPMX26_00621at 660.418 kb on + strand, within MPMX26_00621at 660.418 kb on + strand, within MPMX26_00621at 660.425 kb on + strand, within MPMX26_00621at 660.426 kb on + strand, within MPMX26_00621at 660.426 kb on + strand, within MPMX26_00621at 660.426 kb on + strand, within MPMX26_00621at 660.426 kb on + strand, within MPMX26_00621at 660.441 kb on + strand, within MPMX26_00621at 660.441 kb on + strand, within MPMX26_00621at 660.449 kb on + strand, within MPMX26_00621at 660.449 kb on + strand, within MPMX26_00621at 660.488 kb on + strand, within MPMX26_00621at 660.507 kb on + strand, within MPMX26_00621at 660.511 kb on + strand, within MPMX26_00621at 660.521 kb on + strandat 660.521 kb on + strandat 660.543 kb on + strandat 660.568 kb on + strandat 660.573 kb on + strandat 660.573 kb on + strandat 660.636 kb on - strandat 660.919 kb on + strandat 660.960 kb on + strandat 660.960 kb on + strandat 660.960 kb on + strandat 660.978 kb on + strandat 661.006 kb on + strandat 661.039 kb on + strandat 661.049 kb on + strandat 661.054 kb on + strandat 661.065 kb on + strandat 661.066 kb on + strandat 661.066 kb on + strandat 661.066 kb on + strandat 661.066 kb on + strandat 661.066 kb on + strandat 661.102 kb on + strandat 661.112 kb on + strandat 661.163 kb on + strandat 661.381 kb on + strandat 661.393 kb on + strand, within MPMX26_00622at 661.393 kb on + strand, within MPMX26_00622at 661.393 kb on + strand, within MPMX26_00622at 661.393 kb on + strand, within MPMX26_00622at 661.393 kb on + strand, within MPMX26_00622at 661.393 kb on + strand, within MPMX26_00622at 661.393 kb on + strand, within MPMX26_00622at 661.393 kb on + strand, within MPMX26_00622at 661.437 kb on + strand, within MPMX26_00622at 661.437 kb on + strand, within MPMX26_00622at 661.443 kb on + strand, within MPMX26_00622at 661.445 kb on + strand, within MPMX26_00622at 661.445 kb on + strand, within MPMX26_00622at 661.445 kb on + strand, within MPMX26_00622at 661.470 kb on + strand, within MPMX26_00622at 661.527 kb on + strand, within MPMX26_00622at 661.527 kb on + strand, within MPMX26_00622at 661.563 kb on + strand, within MPMX26_00622at 661.568 kb on + strand, within MPMX26_00622at 661.568 kb on + strand, within MPMX26_00622at 661.588 kb on + strand, within MPMX26_00622at 661.588 kb on + strand, within MPMX26_00622at 661.600 kb on + strand, within MPMX26_00622at 661.604 kb on + strand, within MPMX26_00622at 661.604 kb on + strand, within MPMX26_00622at 661.609 kb on + strand, within MPMX26_00622at 661.628 kb on + strand, within MPMX26_00622at 661.628 kb on + strand, within MPMX26_00622

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Per-strain Table

Position Strand Gene LocusTag Fraction Ethanolamine (N)
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658,721 - MPMX26_00620 0.73 +0.7
659,115 + +0.1
659,115 + +0.3
659,251 + -0.3
659,251 + +0.2
659,251 + -0.0
659,251 + +0.1
659,256 + -0.9
659,256 + +1.3
659,256 + -0.3
659,257 + +0.0
659,266 + -0.1
659,308 + -0.3
659,345 + -0.1
659,364 + -0.2
659,372 + -0.3
659,372 + +0.0
659,382 + +0.5
659,382 + +0.1
659,417 + +0.2
659,424 + -0.4
659,431 + +0.4
659,481 + MPMX26_00621 0.13 +0.3
659,509 + MPMX26_00621 0.15 +0.2
659,532 + MPMX26_00621 0.17 +0.0
659,592 + MPMX26_00621 0.22 -0.5
659,594 + MPMX26_00621 0.22 +0.2
659,649 + MPMX26_00621 0.26 +0.4
659,667 + MPMX26_00621 0.27 -0.1
659,667 + MPMX26_00621 0.27 -0.3
659,674 + MPMX26_00621 0.28 -0.5
659,697 + MPMX26_00621 0.29 -0.3
659,697 + MPMX26_00621 0.29 +0.2
659,697 + MPMX26_00621 0.29 +0.7
659,705 + MPMX26_00621 0.30 -0.8
659,710 + MPMX26_00621 0.30 -0.7
659,710 + MPMX26_00621 0.30 +0.7
659,710 + MPMX26_00621 0.30 -0.7
659,710 + MPMX26_00621 0.30 -0.3
659,737 + MPMX26_00621 0.32 -0.0
659,751 + MPMX26_00621 0.33 +0.2
659,761 + MPMX26_00621 0.34 -0.3
659,783 + MPMX26_00621 0.36 +0.1
659,798 + MPMX26_00621 0.37 +0.4
659,798 + MPMX26_00621 0.37 -0.4
659,798 + MPMX26_00621 0.37 +0.1
659,823 + MPMX26_00621 0.39 -0.2
659,861 + MPMX26_00621 0.41 -0.2
659,869 + MPMX26_00621 0.42 -0.6
659,869 + MPMX26_00621 0.42 -0.1
659,869 + MPMX26_00621 0.42 -0.1
659,914 + MPMX26_00621 0.45 +0.0
659,914 + MPMX26_00621 0.45 -0.1
659,941 + MPMX26_00621 0.47 +0.0
659,951 + MPMX26_00621 0.48 +0.0
659,967 + MPMX26_00621 0.49 -0.6
659,985 + MPMX26_00621 0.51 -0.3
659,986 + MPMX26_00621 0.51 -0.3
660,002 + MPMX26_00621 0.52 +0.1
660,002 + MPMX26_00621 0.52 -0.6
660,002 + MPMX26_00621 0.52 +0.2
660,002 + MPMX26_00621 0.52 -0.1
660,002 + MPMX26_00621 0.52 +0.2
660,026 + MPMX26_00621 0.54 +0.3
660,045 + MPMX26_00621 0.55 +0.1
660,048 + MPMX26_00621 0.55 -0.4
660,048 + MPMX26_00621 0.55 -0.0
660,048 + MPMX26_00621 0.55 +0.5
660,139 + MPMX26_00621 0.62 -0.8
660,154 + MPMX26_00621 0.63 +0.1
660,154 + MPMX26_00621 0.63 +0.4
660,156 + MPMX26_00621 0.63 +0.2
660,156 + MPMX26_00621 0.63 +0.8
660,156 + MPMX26_00621 0.63 -0.7
660,156 + MPMX26_00621 0.63 -0.1
660,197 + MPMX26_00621 0.66 +0.2
660,199 + MPMX26_00621 0.66 +0.0
660,209 + MPMX26_00621 0.67 +0.0
660,238 + MPMX26_00621 0.69 -0.6
660,238 + MPMX26_00621 0.69 -0.2
660,251 + MPMX26_00621 0.70 -0.1
660,270 + MPMX26_00621 0.72 +0.4
660,294 + MPMX26_00621 0.73 -0.5
660,322 + MPMX26_00621 0.75 -0.0
660,339 + MPMX26_00621 0.77 -0.1
660,354 + MPMX26_00621 0.78 +0.1
660,354 + MPMX26_00621 0.78 +0.1
660,354 + MPMX26_00621 0.78 +0.3
660,354 + MPMX26_00621 0.78 +0.2
660,377 + MPMX26_00621 0.79 +0.1
660,393 + MPMX26_00621 0.81 +0.2
660,393 + MPMX26_00621 0.81 +0.2
660,393 + MPMX26_00621 0.81 -0.1
660,405 + MPMX26_00621 0.82 -0.3
660,405 + MPMX26_00621 0.82 -1.3
660,418 + MPMX26_00621 0.83 -0.0
660,418 + MPMX26_00621 0.83 -0.3
660,418 + MPMX26_00621 0.83 -0.0
660,418 + MPMX26_00621 0.83 +0.1
660,425 + MPMX26_00621 0.83 -0.0
660,426 + MPMX26_00621 0.83 +0.1
660,426 + MPMX26_00621 0.83 -0.1
660,426 + MPMX26_00621 0.83 +0.4
660,426 + MPMX26_00621 0.83 +0.3
660,441 + MPMX26_00621 0.84 -0.9
660,441 + MPMX26_00621 0.84 -0.8
660,449 + MPMX26_00621 0.85 -0.1
660,449 + MPMX26_00621 0.85 +0.1
660,488 + MPMX26_00621 0.88 -0.1
660,507 + MPMX26_00621 0.89 +0.4
660,511 + MPMX26_00621 0.89 -0.2
660,521 + -0.1
660,521 + -0.4
660,543 + -2.6
660,568 + +0.0
660,573 + -0.1
660,573 + +0.1
660,636 - +0.4
660,919 + +0.8
660,960 + +0.5
660,960 + -0.2
660,960 + +0.2
660,978 + +0.1
661,006 + -1.1
661,039 + -0.1
661,049 + -0.2
661,054 + +0.1
661,065 + +0.4
661,066 + +0.1
661,066 + +0.1
661,066 + -0.7
661,066 + +0.3
661,066 + -0.1
661,102 + +0.3
661,112 + -0.2
661,163 + -0.5
661,381 + -0.0
661,393 + MPMX26_00622 0.10 +0.1
661,393 + MPMX26_00622 0.10 +0.2
661,393 + MPMX26_00622 0.10 +0.7
661,393 + MPMX26_00622 0.10 +0.3
661,393 + MPMX26_00622 0.10 +0.3
661,393 + MPMX26_00622 0.10 -0.2
661,393 + MPMX26_00622 0.10 -0.1
661,393 + MPMX26_00622 0.10 +0.2
661,437 + MPMX26_00622 0.14 +0.4
661,437 + MPMX26_00622 0.14 +0.6
661,443 + MPMX26_00622 0.14 -0.2
661,445 + MPMX26_00622 0.14 +0.1
661,445 + MPMX26_00622 0.14 -1.9
661,445 + MPMX26_00622 0.14 +0.3
661,470 + MPMX26_00622 0.16 +0.2
661,527 + MPMX26_00622 0.21 -0.1
661,527 + MPMX26_00622 0.21 -0.0
661,563 + MPMX26_00622 0.24 +0.5
661,568 + MPMX26_00622 0.24 +0.2
661,568 + MPMX26_00622 0.24 -0.2
661,588 + MPMX26_00622 0.26 -0.4
661,588 + MPMX26_00622 0.26 +0.3
661,600 + MPMX26_00622 0.27 -0.1
661,604 + MPMX26_00622 0.27 +0.1
661,604 + MPMX26_00622 0.27 -0.9
661,609 + MPMX26_00622 0.28 +0.3
661,628 + MPMX26_00622 0.29 +0.7
661,628 + MPMX26_00622 0.29 +0.0

Or see this region's nucleotide sequence