Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_03118

Experiment: Ethanolamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_03117 and MPMX26_03118 are separated by 11 nucleotidesMPMX26_03118 and MPMX26_03119 are separated by 20 nucleotidesMPMX26_03119 and MPMX26_03120 are separated by 26 nucleotides MPMX26_03117: MPMX26_03117 - Copper-exporting P-type ATPase, at 30,290 to 32,665 _03117 MPMX26_03118: MPMX26_03118 - hypothetical protein, at 32,677 to 33,327 _03118 MPMX26_03119: MPMX26_03119 - hypothetical protein, at 33,348 to 33,596 _03119 MPMX26_03120: MPMX26_03120 - hypothetical protein, at 33,623 to 34,054 _03120 Position (kb) 32 33 34Strain fitness (log2 ratio) -2 -1 0 1 2at 31.684 kb on - strand, within MPMX26_03117at 31.723 kb on - strand, within MPMX26_03117at 31.744 kb on - strand, within MPMX26_03117at 31.921 kb on - strand, within MPMX26_03117at 31.951 kb on - strand, within MPMX26_03117at 32.042 kb on - strand, within MPMX26_03117at 32.123 kb on - strand, within MPMX26_03117at 32.123 kb on - strand, within MPMX26_03117at 32.167 kb on - strand, within MPMX26_03117at 32.226 kb on - strand, within MPMX26_03117at 32.228 kb on - strand, within MPMX26_03117at 32.244 kb on - strand, within MPMX26_03117at 32.311 kb on - strand, within MPMX26_03117at 32.327 kb on - strand, within MPMX26_03117at 32.387 kb on - strand, within MPMX26_03117at 32.400 kb on - strand, within MPMX26_03117at 32.425 kb on - strand, within MPMX26_03117at 32.425 kb on - strand, within MPMX26_03117at 32.488 kb on - strandat 32.612 kb on - strandat 32.616 kb on + strandat 32.624 kb on - strandat 32.624 kb on - strandat 32.624 kb on - strandat 32.723 kb on - strandat 32.733 kb on - strandat 32.740 kb on - strandat 32.748 kb on - strand, within MPMX26_03118at 32.748 kb on - strand, within MPMX26_03118at 32.748 kb on - strand, within MPMX26_03118at 32.748 kb on - strand, within MPMX26_03118at 32.748 kb on - strand, within MPMX26_03118at 32.748 kb on - strand, within MPMX26_03118at 32.748 kb on - strand, within MPMX26_03118at 32.748 kb on - strand, within MPMX26_03118at 32.748 kb on - strand, within MPMX26_03118at 32.748 kb on - strand, within MPMX26_03118at 32.748 kb on - strand, within MPMX26_03118at 32.832 kb on - strand, within MPMX26_03118at 32.956 kb on + strand, within MPMX26_03118at 32.959 kb on - strand, within MPMX26_03118at 33.063 kb on + strand, within MPMX26_03118at 33.156 kb on - strand, within MPMX26_03118at 33.302 kb on + strandat 33.474 kb on - strand, within MPMX26_03119at 33.519 kb on - strand, within MPMX26_03119at 33.519 kb on - strand, within MPMX26_03119at 33.532 kb on - strand, within MPMX26_03119at 33.533 kb on - strand, within MPMX26_03119at 33.642 kb on + strandat 33.648 kb on - strandat 33.648 kb on - strandat 33.650 kb on - strandat 33.650 kb on - strandat 33.650 kb on - strandat 33.650 kb on - strandat 33.658 kb on - strandat 33.658 kb on - strandat 33.662 kb on - strandat 33.741 kb on - strand, within MPMX26_03120at 33.763 kb on - strand, within MPMX26_03120at 33.769 kb on - strand, within MPMX26_03120at 33.769 kb on - strand, within MPMX26_03120at 33.788 kb on - strand, within MPMX26_03120at 33.822 kb on - strand, within MPMX26_03120at 33.869 kb on - strand, within MPMX26_03120at 33.869 kb on - strand, within MPMX26_03120at 33.869 kb on - strand, within MPMX26_03120at 33.903 kb on - strand, within MPMX26_03120at 34.101 kb on - strandat 34.106 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Ethanolamine (N)
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31,684 - MPMX26_03117 0.59 +0.1
31,723 - MPMX26_03117 0.60 +0.2
31,744 - MPMX26_03117 0.61 -0.9
31,921 - MPMX26_03117 0.69 +1.3
31,951 - MPMX26_03117 0.70 -0.6
32,042 - MPMX26_03117 0.74 -0.3
32,123 - MPMX26_03117 0.77 -0.4
32,123 - MPMX26_03117 0.77 -1.2
32,167 - MPMX26_03117 0.79 +0.7
32,226 - MPMX26_03117 0.81 +0.4
32,228 - MPMX26_03117 0.82 -2.2
32,244 - MPMX26_03117 0.82 +1.4
32,311 - MPMX26_03117 0.85 +0.9
32,327 - MPMX26_03117 0.86 +1.7
32,387 - MPMX26_03117 0.88 +0.2
32,400 - MPMX26_03117 0.89 +0.9
32,425 - MPMX26_03117 0.90 +0.0
32,425 - MPMX26_03117 0.90 +0.7
32,488 - +1.2
32,612 - -1.5
32,616 + +0.1
32,624 - -0.3
32,624 - -0.4
32,624 - +2.0
32,723 - +0.2
32,733 - -0.4
32,740 - +0.7
32,748 - MPMX26_03118 0.11 -0.8
32,748 - MPMX26_03118 0.11 -0.6
32,748 - MPMX26_03118 0.11 +1.4
32,748 - MPMX26_03118 0.11 -0.9
32,748 - MPMX26_03118 0.11 +1.8
32,748 - MPMX26_03118 0.11 -0.8
32,748 - MPMX26_03118 0.11 -0.3
32,748 - MPMX26_03118 0.11 +0.3
32,748 - MPMX26_03118 0.11 +0.5
32,748 - MPMX26_03118 0.11 +0.4
32,748 - MPMX26_03118 0.11 +2.2
32,832 - MPMX26_03118 0.24 +0.8
32,956 + MPMX26_03118 0.43 -0.6
32,959 - MPMX26_03118 0.43 +0.9
33,063 + MPMX26_03118 0.59 -0.2
33,156 - MPMX26_03118 0.74 +0.8
33,302 + +0.7
33,474 - MPMX26_03119 0.51 +1.4
33,519 - MPMX26_03119 0.69 +1.0
33,519 - MPMX26_03119 0.69 +1.8
33,532 - MPMX26_03119 0.74 +1.1
33,533 - MPMX26_03119 0.74 +1.4
33,642 + -0.9
33,648 - +0.0
33,648 - -0.3
33,650 - -1.9
33,650 - -1.2
33,650 - +1.2
33,650 - -1.0
33,658 - +0.4
33,658 - +0.8
33,662 - +0.3
33,741 - MPMX26_03120 0.27 -0.6
33,763 - MPMX26_03120 0.32 +1.3
33,769 - MPMX26_03120 0.34 -0.0
33,769 - MPMX26_03120 0.34 +0.3
33,788 - MPMX26_03120 0.38 +2.1
33,822 - MPMX26_03120 0.46 +2.7
33,869 - MPMX26_03120 0.57 +0.6
33,869 - MPMX26_03120 0.57 +0.9
33,869 - MPMX26_03120 0.57 +0.2
33,903 - MPMX26_03120 0.65 -0.2
34,101 - +0.6
34,106 - +1.1

Or see this region's nucleotide sequence