Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_03112

Experiment: Ethanolamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_03110 and MPMX26_03111 are separated by 23 nucleotidesMPMX26_03111 and MPMX26_03112 overlap by 14 nucleotidesMPMX26_03112 and MPMX26_03113 are separated by 89 nucleotidesMPMX26_03113 and MPMX26_03114 are separated by 148 nucleotides MPMX26_03110: MPMX26_03110 - hypothetical protein, at 23,349 to 23,549 _03110 MPMX26_03111: MPMX26_03111 - hypothetical protein, at 23,573 to 24,493 _03111 MPMX26_03112: MPMX26_03112 - Copper resistance protein A, at 24,480 to 26,363 _03112 MPMX26_03113: MPMX26_03113 - hypothetical protein, at 26,453 to 26,749 _03113 MPMX26_03114: MPMX26_03114 - Transcriptional regulatory protein CusR, at 26,898 to 27,578 _03114 Position (kb) 24 25 26 27Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 23.631 kb on - strandat 23.631 kb on - strandat 23.631 kb on - strandat 23.633 kb on - strandat 23.696 kb on - strand, within MPMX26_03111at 23.696 kb on - strand, within MPMX26_03111at 23.696 kb on - strand, within MPMX26_03111at 23.696 kb on - strand, within MPMX26_03111at 23.807 kb on - strand, within MPMX26_03111at 23.890 kb on - strand, within MPMX26_03111at 24.004 kb on - strand, within MPMX26_03111at 24.037 kb on - strand, within MPMX26_03111at 24.037 kb on - strand, within MPMX26_03111at 24.037 kb on - strand, within MPMX26_03111at 24.037 kb on - strand, within MPMX26_03111at 24.152 kb on - strand, within MPMX26_03111at 24.251 kb on - strand, within MPMX26_03111at 24.251 kb on - strand, within MPMX26_03111at 24.251 kb on - strand, within MPMX26_03111at 24.266 kb on - strand, within MPMX26_03111at 24.281 kb on - strand, within MPMX26_03111at 24.281 kb on - strand, within MPMX26_03111at 24.281 kb on - strand, within MPMX26_03111at 24.281 kb on - strand, within MPMX26_03111at 24.281 kb on - strand, within MPMX26_03111at 24.281 kb on - strand, within MPMX26_03111at 24.281 kb on - strand, within MPMX26_03111at 24.281 kb on - strand, within MPMX26_03111at 24.346 kb on - strand, within MPMX26_03111at 24.392 kb on - strand, within MPMX26_03111at 24.443 kb on - strandat 24.525 kb on - strandat 24.530 kb on - strandat 24.595 kb on - strandat 24.595 kb on - strandat 24.646 kb on + strandat 24.647 kb on - strandat 24.654 kb on - strandat 24.654 kb on - strandat 24.654 kb on - strandat 24.659 kb on - strandat 24.724 kb on - strand, within MPMX26_03112at 24.725 kb on - strand, within MPMX26_03112at 24.725 kb on - strand, within MPMX26_03112at 24.725 kb on - strand, within MPMX26_03112at 24.734 kb on - strand, within MPMX26_03112at 24.735 kb on - strand, within MPMX26_03112at 24.771 kb on - strand, within MPMX26_03112at 24.776 kb on - strand, within MPMX26_03112at 24.819 kb on - strand, within MPMX26_03112at 24.927 kb on - strand, within MPMX26_03112at 24.996 kb on - strand, within MPMX26_03112at 25.002 kb on - strand, within MPMX26_03112at 25.011 kb on - strand, within MPMX26_03112at 25.013 kb on - strand, within MPMX26_03112at 25.023 kb on - strand, within MPMX26_03112at 25.068 kb on + strand, within MPMX26_03112at 25.082 kb on - strand, within MPMX26_03112at 25.082 kb on - strand, within MPMX26_03112at 25.082 kb on - strand, within MPMX26_03112at 25.083 kb on - strand, within MPMX26_03112at 25.106 kb on - strand, within MPMX26_03112at 25.111 kb on - strand, within MPMX26_03112at 25.112 kb on - strand, within MPMX26_03112at 25.112 kb on - strand, within MPMX26_03112at 25.118 kb on - strand, within MPMX26_03112at 25.142 kb on - strand, within MPMX26_03112at 25.270 kb on - strand, within MPMX26_03112at 25.304 kb on - strand, within MPMX26_03112at 25.469 kb on - strand, within MPMX26_03112at 25.485 kb on - strand, within MPMX26_03112at 25.485 kb on - strand, within MPMX26_03112at 25.490 kb on - strand, within MPMX26_03112at 25.525 kb on - strand, within MPMX26_03112at 25.530 kb on - strand, within MPMX26_03112at 25.530 kb on - strand, within MPMX26_03112at 25.530 kb on - strand, within MPMX26_03112at 25.530 kb on - strand, within MPMX26_03112at 25.623 kb on - strand, within MPMX26_03112at 25.623 kb on - strand, within MPMX26_03112at 25.623 kb on - strand, within MPMX26_03112at 25.734 kb on - strand, within MPMX26_03112at 25.970 kb on - strand, within MPMX26_03112at 26.111 kb on - strand, within MPMX26_03112at 26.169 kb on + strand, within MPMX26_03112at 26.374 kb on - strandat 26.422 kb on + strandat 26.477 kb on - strandat 26.568 kb on - strand, within MPMX26_03113at 26.711 kb on + strand, within MPMX26_03113at 26.719 kb on - strand, within MPMX26_03113at 26.951 kb on + strandat 26.991 kb on - strand, within MPMX26_03114at 27.003 kb on + strand, within MPMX26_03114at 27.242 kb on + strand, within MPMX26_03114at 27.242 kb on + strand, within MPMX26_03114at 27.252 kb on + strand, within MPMX26_03114at 27.333 kb on + strand, within MPMX26_03114at 27.340 kb on + strand, within MPMX26_03114

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Per-strain Table

Position Strand Gene LocusTag Fraction Ethanolamine (N)
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23,631 - -0.2
23,631 - +1.0
23,631 - +0.6
23,633 - +0.4
23,696 - MPMX26_03111 0.13 -0.4
23,696 - MPMX26_03111 0.13 +0.7
23,696 - MPMX26_03111 0.13 +0.3
23,696 - MPMX26_03111 0.13 -0.4
23,807 - MPMX26_03111 0.25 +0.8
23,890 - MPMX26_03111 0.34 -0.4
24,004 - MPMX26_03111 0.47 +0.8
24,037 - MPMX26_03111 0.50 +0.8
24,037 - MPMX26_03111 0.50 +2.8
24,037 - MPMX26_03111 0.50 -0.6
24,037 - MPMX26_03111 0.50 +2.3
24,152 - MPMX26_03111 0.63 -0.7
24,251 - MPMX26_03111 0.74 -0.2
24,251 - MPMX26_03111 0.74 +0.2
24,251 - MPMX26_03111 0.74 +2.2
24,266 - MPMX26_03111 0.75 -0.2
24,281 - MPMX26_03111 0.77 -0.7
24,281 - MPMX26_03111 0.77 +0.2
24,281 - MPMX26_03111 0.77 -0.2
24,281 - MPMX26_03111 0.77 +2.0
24,281 - MPMX26_03111 0.77 -0.3
24,281 - MPMX26_03111 0.77 +1.7
24,281 - MPMX26_03111 0.77 +0.0
24,281 - MPMX26_03111 0.77 -1.4
24,346 - MPMX26_03111 0.84 +0.1
24,392 - MPMX26_03111 0.89 -2.3
24,443 - +0.3
24,525 - -0.9
24,530 - -0.9
24,595 - -0.6
24,595 - -2.4
24,646 + +1.4
24,647 - -1.8
24,654 - -1.6
24,654 - -0.9
24,654 - -2.3
24,659 - -2.0
24,724 - MPMX26_03112 0.13 -1.6
24,725 - MPMX26_03112 0.13 -1.7
24,725 - MPMX26_03112 0.13 -0.3
24,725 - MPMX26_03112 0.13 +0.4
24,734 - MPMX26_03112 0.13 -0.5
24,735 - MPMX26_03112 0.14 +0.3
24,771 - MPMX26_03112 0.15 -2.3
24,776 - MPMX26_03112 0.16 -0.7
24,819 - MPMX26_03112 0.18 +0.9
24,927 - MPMX26_03112 0.24 -0.2
24,996 - MPMX26_03112 0.27 -1.1
25,002 - MPMX26_03112 0.28 +1.4
25,011 - MPMX26_03112 0.28 -0.7
25,013 - MPMX26_03112 0.28 -0.6
25,023 - MPMX26_03112 0.29 -1.9
25,068 + MPMX26_03112 0.31 +1.4
25,082 - MPMX26_03112 0.32 -2.9
25,082 - MPMX26_03112 0.32 -1.4
25,082 - MPMX26_03112 0.32 -0.8
25,083 - MPMX26_03112 0.32 -0.9
25,106 - MPMX26_03112 0.33 -0.6
25,111 - MPMX26_03112 0.33 -0.6
25,112 - MPMX26_03112 0.34 -1.2
25,112 - MPMX26_03112 0.34 -1.6
25,118 - MPMX26_03112 0.34 -1.0
25,142 - MPMX26_03112 0.35 -1.9
25,270 - MPMX26_03112 0.42 +1.4
25,304 - MPMX26_03112 0.44 -2.0
25,469 - MPMX26_03112 0.52 +0.2
25,485 - MPMX26_03112 0.53 -0.9
25,485 - MPMX26_03112 0.53 -0.4
25,490 - MPMX26_03112 0.54 +0.7
25,525 - MPMX26_03112 0.55 -0.6
25,530 - MPMX26_03112 0.56 -0.4
25,530 - MPMX26_03112 0.56 +0.1
25,530 - MPMX26_03112 0.56 +0.4
25,530 - MPMX26_03112 0.56 +0.4
25,623 - MPMX26_03112 0.61 -1.7
25,623 - MPMX26_03112 0.61 +0.7
25,623 - MPMX26_03112 0.61 -1.4
25,734 - MPMX26_03112 0.67 -2.7
25,970 - MPMX26_03112 0.79 -3.0
26,111 - MPMX26_03112 0.87 +0.1
26,169 + MPMX26_03112 0.90 +0.1
26,374 - -0.2
26,422 + -0.7
26,477 - -0.1
26,568 - MPMX26_03113 0.39 -0.1
26,711 + MPMX26_03113 0.87 -1.4
26,719 - MPMX26_03113 0.90 -0.6
26,951 + -0.4
26,991 - MPMX26_03114 0.14 -0.0
27,003 + MPMX26_03114 0.15 +1.0
27,242 + MPMX26_03114 0.51 +1.4
27,242 + MPMX26_03114 0.51 +0.8
27,252 + MPMX26_03114 0.52 +1.0
27,333 + MPMX26_03114 0.64 -0.2
27,340 + MPMX26_03114 0.65 +1.3

Or see this region's nucleotide sequence