Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_03098

Experiment: Ethanolamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_03097 and MPMX26_03098 overlap by 11 nucleotidesMPMX26_03098 and MPMX26_03099 are separated by 1 nucleotides MPMX26_03097: MPMX26_03097 - Cobalt-zinc-cadmium resistance protein CzcA, at 9,477 to 12,635 _03097 MPMX26_03098: MPMX26_03098 - Cobalt-zinc-cadmium resistance protein CzcB, at 12,625 to 13,875 _03098 MPMX26_03099: MPMX26_03099 - hypothetical protein, at 13,877 to 15,244 _03099 Position (kb) 12 13 14Strain fitness (log2 ratio) -2 -1 0 1at 11.733 kb on - strand, within MPMX26_03097at 11.992 kb on - strand, within MPMX26_03097at 12.275 kb on + strand, within MPMX26_03097at 12.467 kb on - strandat 12.705 kb on + strandat 12.713 kb on - strandat 13.018 kb on - strand, within MPMX26_03098at 13.018 kb on - strand, within MPMX26_03098at 13.113 kb on - strand, within MPMX26_03098at 13.236 kb on - strand, within MPMX26_03098at 13.866 kb on - strandat 13.912 kb on - strandat 14.030 kb on + strand, within MPMX26_03099at 14.437 kb on + strand, within MPMX26_03099at 14.674 kb on - strand, within MPMX26_03099at 14.674 kb on - strand, within MPMX26_03099

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Per-strain Table

Position Strand Gene LocusTag Fraction Ethanolamine (N)
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11,733 - MPMX26_03097 0.71 +0.6
11,992 - MPMX26_03097 0.80 -0.2
12,275 + MPMX26_03097 0.89 -2.1
12,467 - -0.2
12,705 + -0.3
12,713 - -0.6
13,018 - MPMX26_03098 0.31 -2.4
13,018 - MPMX26_03098 0.31 -0.2
13,113 - MPMX26_03098 0.39 -1.2
13,236 - MPMX26_03098 0.49 -2.4
13,866 - +1.4
13,912 - -0.7
14,030 + MPMX26_03099 0.11 -0.9
14,437 + MPMX26_03099 0.41 -0.7
14,674 - MPMX26_03099 0.58 +0.1
14,674 - MPMX26_03099 0.58 +0.4

Or see this region's nucleotide sequence