Experiment: Ethanolamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_03046 and MPMX26_03047 are separated by 117 nucleotides MPMX26_03047 and MPMX26_03048 are separated by 165 nucleotides MPMX26_03048 and MPMX26_03049 are separated by 64 nucleotides
MPMX26_03046: MPMX26_03046 - Protein GrpE, at 3,165,794 to 3,166,348
_03046
MPMX26_03047: MPMX26_03047 - Chaperone protein DnaK, at 3,166,466 to 3,168,412
_03047
MPMX26_03048: MPMX26_03048 - hypothetical protein, at 3,168,578 to 3,168,973
_03048
MPMX26_03049: MPMX26_03049 - Tn3 family transposase TnXax1, at 3,169,038 to 3,170,321
_03049
Position (kb)
3166
3167
3168
3169 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3165.681 kb on + strand at 3165.689 kb on + strand at 3165.689 kb on + strand at 3165.697 kb on - strand at 3165.697 kb on - strand at 3165.710 kb on + strand at 3165.710 kb on + strand at 3165.715 kb on + strand at 3165.715 kb on + strand at 3165.723 kb on + strand at 3165.742 kb on + strand at 3165.752 kb on + strand at 3165.755 kb on + strand at 3165.755 kb on + strand at 3166.315 kb on + strand at 3166.315 kb on + strand at 3166.330 kb on + strand at 3166.330 kb on + strand at 3166.330 kb on + strand at 3166.330 kb on + strand at 3166.330 kb on + strand at 3166.330 kb on + strand at 3166.330 kb on + strand at 3166.330 kb on + strand at 3166.330 kb on + strand at 3166.330 kb on + strand at 3166.330 kb on + strand at 3166.330 kb on + strand at 3166.330 kb on + strand at 3166.330 kb on + strand at 3166.330 kb on + strand at 3166.330 kb on + strand at 3166.330 kb on + strand at 3166.330 kb on + strand at 3166.330 kb on + strand at 3166.330 kb on + strand at 3166.330 kb on + strand at 3166.330 kb on + strand at 3166.330 kb on + strand at 3166.330 kb on + strand at 3166.330 kb on + strand at 3166.330 kb on + strand at 3166.330 kb on + strand at 3166.330 kb on + strand at 3166.330 kb on + strand at 3166.330 kb on + strand at 3166.330 kb on + strand at 3166.330 kb on + strand at 3166.330 kb on + strand at 3166.330 kb on + strand at 3166.331 kb on + strand at 3166.341 kb on + strand at 3168.093 kb on + strand, within MPMX26_03047 at 3168.210 kb on + strand, within MPMX26_03047 at 3168.285 kb on + strand at 3168.294 kb on + strand at 3168.306 kb on + strand at 3168.306 kb on + strand at 3168.306 kb on + strand at 3168.306 kb on + strand at 3168.306 kb on + strand at 3168.608 kb on - strand at 3168.628 kb on + strand, within MPMX26_03048 at 3168.664 kb on + strand, within MPMX26_03048 at 3168.677 kb on + strand, within MPMX26_03048 at 3168.679 kb on + strand, within MPMX26_03048 at 3168.694 kb on + strand, within MPMX26_03048 at 3168.696 kb on + strand, within MPMX26_03048 at 3168.701 kb on + strand, within MPMX26_03048 at 3168.701 kb on + strand, within MPMX26_03048 at 3168.701 kb on + strand, within MPMX26_03048 at 3168.709 kb on - strand, within MPMX26_03048 at 3168.801 kb on + strand, within MPMX26_03048 at 3168.811 kb on + strand, within MPMX26_03048 at 3168.902 kb on + strand, within MPMX26_03048 at 3168.940 kb on + strand at 3168.940 kb on + strand at 3169.163 kb on - strand at 3169.179 kb on - strand, within MPMX26_03049 at 3169.179 kb on - strand, within MPMX26_03049 at 3169.242 kb on - strand, within MPMX26_03049 at 3169.242 kb on - strand, within MPMX26_03049 at 3169.304 kb on - strand, within MPMX26_03049 at 3169.316 kb on - strand, within MPMX26_03049 at 3169.391 kb on - strand, within MPMX26_03049 at 3169.391 kb on - strand, within MPMX26_03049 at 3169.409 kb on - strand, within MPMX26_03049 at 3169.409 kb on - strand, within MPMX26_03049 at 3169.409 kb on - strand, within MPMX26_03049 at 3169.409 kb on - strand, within MPMX26_03049
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanolamine (N) remove 3,165,681 + +0.5 3,165,689 + +0.6 3,165,689 + +0.6 3,165,697 - +0.3 3,165,697 - +0.3 3,165,710 + +0.7 3,165,710 + -1.0 3,165,715 + +1.4 3,165,715 + +0.3 3,165,723 + -0.5 3,165,742 + -0.4 3,165,752 + -0.3 3,165,755 + +0.0 3,165,755 + +0.2 3,166,315 + -2.9 3,166,315 + -2.1 3,166,330 + -3.7 3,166,330 + -2.2 3,166,330 + -2.2 3,166,330 + -1.8 3,166,330 + -4.7 3,166,330 + -1.6 3,166,330 + -1.7 3,166,330 + -2.2 3,166,330 + -2.8 3,166,330 + -2.8 3,166,330 + -2.8 3,166,330 + -2.4 3,166,330 + -3.5 3,166,330 + -1.8 3,166,330 + -2.2 3,166,330 + -1.8 3,166,330 + -1.6 3,166,330 + -2.6 3,166,330 + -3.5 3,166,330 + -2.0 3,166,330 + -2.4 3,166,330 + -1.3 3,166,330 + -2.6 3,166,330 + -3.4 3,166,330 + -2.5 3,166,330 + -2.1 3,166,330 + -2.0 3,166,330 + -2.7 3,166,330 + -1.9 3,166,330 + -0.2 3,166,330 + -1.8 3,166,330 + -1.8 3,166,330 + -4.0 3,166,330 + -2.7 3,166,331 + -2.3 3,166,341 + +0.8 3,168,093 + MPMX26_03047 0.84 -3.5 3,168,210 + MPMX26_03047 0.90 -2.6 3,168,285 + -1.9 3,168,294 + -2.1 3,168,306 + -2.3 3,168,306 + -2.5 3,168,306 + -0.9 3,168,306 + -2.8 3,168,306 + -3.3 3,168,608 - -0.3 3,168,628 + MPMX26_03048 0.13 -1.7 3,168,664 + MPMX26_03048 0.22 -2.4 3,168,677 + MPMX26_03048 0.25 -1.3 3,168,679 + MPMX26_03048 0.26 -2.4 3,168,694 + MPMX26_03048 0.29 -1.6 3,168,696 + MPMX26_03048 0.30 -3.1 3,168,701 + MPMX26_03048 0.31 -2.1 3,168,701 + MPMX26_03048 0.31 -2.2 3,168,701 + MPMX26_03048 0.31 -1.8 3,168,709 - MPMX26_03048 0.33 -2.8 3,168,801 + MPMX26_03048 0.56 -2.1 3,168,811 + MPMX26_03048 0.59 -2.4 3,168,902 + MPMX26_03048 0.82 -2.4 3,168,940 + -1.1 3,168,940 + -2.5 3,169,163 - +0.5 3,169,179 - MPMX26_03049 0.11 +0.5 3,169,179 - MPMX26_03049 0.11 +0.8 3,169,242 - MPMX26_03049 0.16 +1.0 3,169,242 - MPMX26_03049 0.16 -0.2 3,169,304 - MPMX26_03049 0.21 +0.4 3,169,316 - MPMX26_03049 0.22 +0.6 3,169,391 - MPMX26_03049 0.27 +0.4 3,169,391 - MPMX26_03049 0.27 +0.5 3,169,409 - MPMX26_03049 0.29 +0.7 3,169,409 - MPMX26_03049 0.29 +0.1 3,169,409 - MPMX26_03049 0.29 +0.8 3,169,409 - MPMX26_03049 0.29 -0.6
Or see this region's nucleotide sequence