Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_03047

Experiment: Ethanolamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_03046 and MPMX26_03047 are separated by 117 nucleotidesMPMX26_03047 and MPMX26_03048 are separated by 165 nucleotidesMPMX26_03048 and MPMX26_03049 are separated by 64 nucleotides MPMX26_03046: MPMX26_03046 - Protein GrpE, at 3,165,794 to 3,166,348 _03046 MPMX26_03047: MPMX26_03047 - Chaperone protein DnaK, at 3,166,466 to 3,168,412 _03047 MPMX26_03048: MPMX26_03048 - hypothetical protein, at 3,168,578 to 3,168,973 _03048 MPMX26_03049: MPMX26_03049 - Tn3 family transposase TnXax1, at 3,169,038 to 3,170,321 _03049 Position (kb) 3166 3167 3168 3169Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 3165.681 kb on + strandat 3165.689 kb on + strandat 3165.689 kb on + strandat 3165.697 kb on - strandat 3165.697 kb on - strandat 3165.710 kb on + strandat 3165.710 kb on + strandat 3165.715 kb on + strandat 3165.715 kb on + strandat 3165.723 kb on + strandat 3165.742 kb on + strandat 3165.752 kb on + strandat 3165.755 kb on + strandat 3165.755 kb on + strandat 3166.315 kb on + strandat 3166.315 kb on + strandat 3166.330 kb on + strandat 3166.330 kb on + strandat 3166.330 kb on + strandat 3166.330 kb on + strandat 3166.330 kb on + strandat 3166.330 kb on + strandat 3166.330 kb on + strandat 3166.330 kb on + strandat 3166.330 kb on + strandat 3166.330 kb on + strandat 3166.330 kb on + strandat 3166.330 kb on + strandat 3166.330 kb on + strandat 3166.330 kb on + strandat 3166.330 kb on + strandat 3166.330 kb on + strandat 3166.330 kb on + strandat 3166.330 kb on + strandat 3166.330 kb on + strandat 3166.330 kb on + strandat 3166.330 kb on + strandat 3166.330 kb on + strandat 3166.330 kb on + strandat 3166.330 kb on + strandat 3166.330 kb on + strandat 3166.330 kb on + strandat 3166.330 kb on + strandat 3166.330 kb on + strandat 3166.330 kb on + strandat 3166.330 kb on + strandat 3166.330 kb on + strandat 3166.330 kb on + strandat 3166.330 kb on + strandat 3166.330 kb on + strandat 3166.331 kb on + strandat 3166.341 kb on + strandat 3168.093 kb on + strand, within MPMX26_03047at 3168.210 kb on + strand, within MPMX26_03047at 3168.285 kb on + strandat 3168.294 kb on + strandat 3168.306 kb on + strandat 3168.306 kb on + strandat 3168.306 kb on + strandat 3168.306 kb on + strandat 3168.306 kb on + strandat 3168.608 kb on - strandat 3168.628 kb on + strand, within MPMX26_03048at 3168.664 kb on + strand, within MPMX26_03048at 3168.677 kb on + strand, within MPMX26_03048at 3168.679 kb on + strand, within MPMX26_03048at 3168.694 kb on + strand, within MPMX26_03048at 3168.696 kb on + strand, within MPMX26_03048at 3168.701 kb on + strand, within MPMX26_03048at 3168.701 kb on + strand, within MPMX26_03048at 3168.701 kb on + strand, within MPMX26_03048at 3168.709 kb on - strand, within MPMX26_03048at 3168.801 kb on + strand, within MPMX26_03048at 3168.811 kb on + strand, within MPMX26_03048at 3168.902 kb on + strand, within MPMX26_03048at 3168.940 kb on + strandat 3168.940 kb on + strandat 3169.163 kb on - strandat 3169.179 kb on - strand, within MPMX26_03049at 3169.179 kb on - strand, within MPMX26_03049at 3169.242 kb on - strand, within MPMX26_03049at 3169.242 kb on - strand, within MPMX26_03049at 3169.304 kb on - strand, within MPMX26_03049at 3169.316 kb on - strand, within MPMX26_03049at 3169.391 kb on - strand, within MPMX26_03049at 3169.391 kb on - strand, within MPMX26_03049at 3169.409 kb on - strand, within MPMX26_03049at 3169.409 kb on - strand, within MPMX26_03049at 3169.409 kb on - strand, within MPMX26_03049at 3169.409 kb on - strand, within MPMX26_03049

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Per-strain Table

Position Strand Gene LocusTag Fraction Ethanolamine (N)
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3,165,681 + +0.5
3,165,689 + +0.6
3,165,689 + +0.6
3,165,697 - +0.3
3,165,697 - +0.3
3,165,710 + +0.7
3,165,710 + -1.0
3,165,715 + +1.4
3,165,715 + +0.3
3,165,723 + -0.5
3,165,742 + -0.4
3,165,752 + -0.3
3,165,755 + +0.0
3,165,755 + +0.2
3,166,315 + -2.9
3,166,315 + -2.1
3,166,330 + -3.7
3,166,330 + -2.2
3,166,330 + -2.2
3,166,330 + -1.8
3,166,330 + -4.7
3,166,330 + -1.6
3,166,330 + -1.7
3,166,330 + -2.2
3,166,330 + -2.8
3,166,330 + -2.8
3,166,330 + -2.8
3,166,330 + -2.4
3,166,330 + -3.5
3,166,330 + -1.8
3,166,330 + -2.2
3,166,330 + -1.8
3,166,330 + -1.6
3,166,330 + -2.6
3,166,330 + -3.5
3,166,330 + -2.0
3,166,330 + -2.4
3,166,330 + -1.3
3,166,330 + -2.6
3,166,330 + -3.4
3,166,330 + -2.5
3,166,330 + -2.1
3,166,330 + -2.0
3,166,330 + -2.7
3,166,330 + -1.9
3,166,330 + -0.2
3,166,330 + -1.8
3,166,330 + -1.8
3,166,330 + -4.0
3,166,330 + -2.7
3,166,331 + -2.3
3,166,341 + +0.8
3,168,093 + MPMX26_03047 0.84 -3.5
3,168,210 + MPMX26_03047 0.90 -2.6
3,168,285 + -1.9
3,168,294 + -2.1
3,168,306 + -2.3
3,168,306 + -2.5
3,168,306 + -0.9
3,168,306 + -2.8
3,168,306 + -3.3
3,168,608 - -0.3
3,168,628 + MPMX26_03048 0.13 -1.7
3,168,664 + MPMX26_03048 0.22 -2.4
3,168,677 + MPMX26_03048 0.25 -1.3
3,168,679 + MPMX26_03048 0.26 -2.4
3,168,694 + MPMX26_03048 0.29 -1.6
3,168,696 + MPMX26_03048 0.30 -3.1
3,168,701 + MPMX26_03048 0.31 -2.1
3,168,701 + MPMX26_03048 0.31 -2.2
3,168,701 + MPMX26_03048 0.31 -1.8
3,168,709 - MPMX26_03048 0.33 -2.8
3,168,801 + MPMX26_03048 0.56 -2.1
3,168,811 + MPMX26_03048 0.59 -2.4
3,168,902 + MPMX26_03048 0.82 -2.4
3,168,940 + -1.1
3,168,940 + -2.5
3,169,163 - +0.5
3,169,179 - MPMX26_03049 0.11 +0.5
3,169,179 - MPMX26_03049 0.11 +0.8
3,169,242 - MPMX26_03049 0.16 +1.0
3,169,242 - MPMX26_03049 0.16 -0.2
3,169,304 - MPMX26_03049 0.21 +0.4
3,169,316 - MPMX26_03049 0.22 +0.6
3,169,391 - MPMX26_03049 0.27 +0.4
3,169,391 - MPMX26_03049 0.27 +0.5
3,169,409 - MPMX26_03049 0.29 +0.7
3,169,409 - MPMX26_03049 0.29 +0.1
3,169,409 - MPMX26_03049 0.29 +0.8
3,169,409 - MPMX26_03049 0.29 -0.6

Or see this region's nucleotide sequence