Experiment: Ethanolamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_03006 and MPMX26_03007 are separated by 296 nucleotides MPMX26_03007 and MPMX26_03008 are separated by 111 nucleotides MPMX26_03008 and MPMX26_03009 are separated by 103 nucleotides MPMX26_03009 and MPMX26_03010 are separated by 144 nucleotides
MPMX26_03006: MPMX26_03006 - 4-hydroxy-tetrahydrodipicolinate reductase, at 3,120,088 to 3,120,909
_03006
MPMX26_03007: MPMX26_03007 - hypothetical protein, at 3,121,206 to 3,121,565
_03007
MPMX26_03008: MPMX26_03008 - Chaperone protein DnaJ, at 3,121,677 to 3,122,789
_03008
MPMX26_03009: MPMX26_03009 - hypothetical protein, at 3,122,893 to 3,123,270
_03009
MPMX26_03010: MPMX26_03010 - Cobalt-zinc-cadmium resistance protein CzcA, at 3,123,415 to 3,126,543
_03010
Position (kb)
3121
3122
3123 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3121.200 kb on + strand at 3121.245 kb on - strand, within MPMX26_03007 at 3121.338 kb on - strand, within MPMX26_03007 at 3121.350 kb on - strand, within MPMX26_03007 at 3121.352 kb on + strand, within MPMX26_03007 at 3121.360 kb on - strand, within MPMX26_03007 at 3121.381 kb on - strand, within MPMX26_03007 at 3121.462 kb on - strand, within MPMX26_03007 at 3121.462 kb on - strand, within MPMX26_03007 at 3121.463 kb on - strand, within MPMX26_03007 at 3121.473 kb on + strand, within MPMX26_03007 at 3121.476 kb on - strand, within MPMX26_03007 at 3121.486 kb on - strand, within MPMX26_03007 at 3121.491 kb on - strand, within MPMX26_03007 at 3121.496 kb on - strand, within MPMX26_03007 at 3121.508 kb on - strand, within MPMX26_03007 at 3121.539 kb on - strand at 3121.568 kb on - strand at 3121.568 kb on - strand at 3121.574 kb on - strand at 3121.603 kb on - strand at 3121.635 kb on - strand at 3121.640 kb on - strand at 3121.651 kb on - strand at 3121.686 kb on - strand at 3121.688 kb on - strand at 3121.723 kb on - strand at 3121.723 kb on - strand at 3121.728 kb on - strand at 3121.731 kb on - strand at 3121.736 kb on - strand at 3121.736 kb on - strand at 3121.736 kb on - strand at 3121.736 kb on - strand at 3121.736 kb on - strand at 3121.736 kb on - strand at 3121.736 kb on - strand at 3121.747 kb on - strand at 3121.790 kb on - strand, within MPMX26_03008 at 3121.931 kb on - strand, within MPMX26_03008 at 3121.931 kb on - strand, within MPMX26_03008 at 3121.931 kb on - strand, within MPMX26_03008 at 3122.000 kb on - strand, within MPMX26_03008 at 3122.000 kb on - strand, within MPMX26_03008 at 3122.000 kb on - strand, within MPMX26_03008 at 3122.126 kb on - strand, within MPMX26_03008 at 3122.126 kb on - strand, within MPMX26_03008 at 3122.126 kb on - strand, within MPMX26_03008 at 3122.177 kb on - strand, within MPMX26_03008 at 3122.803 kb on - strand at 3122.983 kb on + strand, within MPMX26_03009 at 3122.991 kb on - strand, within MPMX26_03009 at 3122.991 kb on - strand, within MPMX26_03009 at 3122.991 kb on - strand, within MPMX26_03009 at 3122.991 kb on - strand, within MPMX26_03009 at 3122.991 kb on - strand, within MPMX26_03009 at 3122.991 kb on - strand, within MPMX26_03009 at 3122.991 kb on - strand, within MPMX26_03009 at 3122.991 kb on - strand, within MPMX26_03009 at 3122.991 kb on - strand, within MPMX26_03009 at 3122.996 kb on - strand, within MPMX26_03009 at 3122.996 kb on - strand, within MPMX26_03009 at 3123.001 kb on - strand, within MPMX26_03009 at 3123.006 kb on - strand, within MPMX26_03009 at 3123.006 kb on - strand, within MPMX26_03009 at 3123.049 kb on + strand, within MPMX26_03009 at 3123.050 kb on - strand, within MPMX26_03009 at 3123.050 kb on - strand, within MPMX26_03009 at 3123.057 kb on - strand, within MPMX26_03009 at 3123.092 kb on - strand, within MPMX26_03009 at 3123.125 kb on - strand, within MPMX26_03009 at 3123.137 kb on - strand, within MPMX26_03009 at 3123.147 kb on - strand, within MPMX26_03009 at 3123.147 kb on - strand, within MPMX26_03009 at 3123.199 kb on - strand, within MPMX26_03009 at 3123.247 kb on + strand at 3123.247 kb on - strand at 3123.257 kb on - strand at 3123.257 kb on - strand at 3123.257 kb on - strand at 3123.262 kb on - strand at 3123.274 kb on - strand at 3123.339 kb on - strand at 3123.361 kb on - strand at 3123.429 kb on + strand at 3123.429 kb on + strand at 3123.437 kb on - strand at 3123.437 kb on - strand at 3123.437 kb on - strand at 3123.441 kb on - strand at 3123.453 kb on - strand at 3123.453 kb on - strand at 3123.478 kb on - strand at 3123.500 kb on - strand at 3123.543 kb on - strand at 3123.561 kb on - strand at 3123.561 kb on - strand at 3123.561 kb on - strand at 3123.561 kb on - strand at 3123.652 kb on - strand at 3123.653 kb on - strand at 3123.671 kb on - strand at 3123.672 kb on + strand at 3123.676 kb on - strand at 3123.680 kb on - strand at 3123.680 kb on - strand at 3123.713 kb on - strand at 3123.713 kb on - strand at 3123.713 kb on - strand at 3123.718 kb on - strand at 3123.741 kb on - strand, within MPMX26_03010 at 3123.766 kb on + strand, within MPMX26_03010 at 3123.778 kb on - strand, within MPMX26_03010 at 3123.780 kb on + strand, within MPMX26_03010
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanolamine (N) remove 3,121,200 + +0.3 3,121,245 - MPMX26_03007 0.11 +0.1 3,121,338 - MPMX26_03007 0.37 -3.0 3,121,350 - MPMX26_03007 0.40 -0.8 3,121,352 + MPMX26_03007 0.41 -1.2 3,121,360 - MPMX26_03007 0.43 -0.8 3,121,381 - MPMX26_03007 0.49 -0.5 3,121,462 - MPMX26_03007 0.71 +0.5 3,121,462 - MPMX26_03007 0.71 -0.6 3,121,463 - MPMX26_03007 0.71 +0.8 3,121,473 + MPMX26_03007 0.74 -1.9 3,121,476 - MPMX26_03007 0.75 -0.8 3,121,486 - MPMX26_03007 0.78 +1.7 3,121,491 - MPMX26_03007 0.79 +0.2 3,121,496 - MPMX26_03007 0.81 -0.5 3,121,508 - MPMX26_03007 0.84 -1.9 3,121,539 - -0.5 3,121,568 - -1.1 3,121,568 - -0.8 3,121,574 - -0.5 3,121,603 - +0.5 3,121,635 - +0.2 3,121,640 - -0.0 3,121,651 - -0.2 3,121,686 - -1.9 3,121,688 - -1.3 3,121,723 - -2.5 3,121,723 - +0.9 3,121,728 - -1.4 3,121,731 - -3.0 3,121,736 - -1.5 3,121,736 - -1.0 3,121,736 - -1.6 3,121,736 - -0.6 3,121,736 - -1.1 3,121,736 - -1.8 3,121,736 - -1.1 3,121,747 - -0.8 3,121,790 - MPMX26_03008 0.10 -3.4 3,121,931 - MPMX26_03008 0.23 -0.5 3,121,931 - MPMX26_03008 0.23 -1.6 3,121,931 - MPMX26_03008 0.23 -1.1 3,122,000 - MPMX26_03008 0.29 -3.3 3,122,000 - MPMX26_03008 0.29 -2.9 3,122,000 - MPMX26_03008 0.29 -1.3 3,122,126 - MPMX26_03008 0.40 -1.9 3,122,126 - MPMX26_03008 0.40 -2.7 3,122,126 - MPMX26_03008 0.40 -0.5 3,122,177 - MPMX26_03008 0.45 -2.3 3,122,803 - -1.8 3,122,983 + MPMX26_03009 0.24 -1.5 3,122,991 - MPMX26_03009 0.26 +1.4 3,122,991 - MPMX26_03009 0.26 -0.0 3,122,991 - MPMX26_03009 0.26 +0.9 3,122,991 - MPMX26_03009 0.26 +1.4 3,122,991 - MPMX26_03009 0.26 +0.1 3,122,991 - MPMX26_03009 0.26 -0.2 3,122,991 - MPMX26_03009 0.26 +0.9 3,122,991 - MPMX26_03009 0.26 +0.1 3,122,991 - MPMX26_03009 0.26 +0.6 3,122,996 - MPMX26_03009 0.27 +0.3 3,122,996 - MPMX26_03009 0.27 +0.3 3,123,001 - MPMX26_03009 0.29 +0.5 3,123,006 - MPMX26_03009 0.30 +0.4 3,123,006 - MPMX26_03009 0.30 -0.5 3,123,049 + MPMX26_03009 0.41 -0.7 3,123,050 - MPMX26_03009 0.42 -0.5 3,123,050 - MPMX26_03009 0.42 +0.3 3,123,057 - MPMX26_03009 0.43 -2.3 3,123,092 - MPMX26_03009 0.53 -1.4 3,123,125 - MPMX26_03009 0.61 +0.2 3,123,137 - MPMX26_03009 0.65 +0.8 3,123,147 - MPMX26_03009 0.67 +0.1 3,123,147 - MPMX26_03009 0.67 +0.5 3,123,199 - MPMX26_03009 0.81 +0.7 3,123,247 + +1.3 3,123,247 - +0.7 3,123,257 - +0.1 3,123,257 - -1.3 3,123,257 - -1.6 3,123,262 - -0.9 3,123,274 - -2.3 3,123,339 - +0.8 3,123,361 - +0.8 3,123,429 + +1.9 3,123,429 + +0.1 3,123,437 - -0.2 3,123,437 - +0.9 3,123,437 - -0.9 3,123,441 - +0.7 3,123,453 - +0.6 3,123,453 - +0.4 3,123,478 - -0.3 3,123,500 - -0.1 3,123,543 - +0.1 3,123,561 - -1.0 3,123,561 - -0.1 3,123,561 - -1.1 3,123,561 - +0.7 3,123,652 - +1.1 3,123,653 - +0.3 3,123,671 - -0.3 3,123,672 + -0.9 3,123,676 - +0.1 3,123,680 - -0.5 3,123,680 - +0.3 3,123,713 - -0.6 3,123,713 - -1.6 3,123,713 - -0.7 3,123,718 - -3.3 3,123,741 - MPMX26_03010 0.10 -0.1 3,123,766 + MPMX26_03010 0.11 -0.9 3,123,778 - MPMX26_03010 0.12 -0.9 3,123,780 + MPMX26_03010 0.12 -0.1
Or see this region's nucleotide sequence