Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02968

Experiment: Ethanolamine (N)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_02966 and MPMX26_02967 are separated by 152 nucleotidesMPMX26_02967 and MPMX26_02968 are separated by 412 nucleotidesMPMX26_02968 and MPMX26_02969 are separated by 77 nucleotides MPMX26_02966: MPMX26_02966 - hypothetical protein, at 3,082,018 to 3,082,497 _02966 MPMX26_02967: MPMX26_02967 - hypothetical protein, at 3,082,650 to 3,082,985 _02967 MPMX26_02968: MPMX26_02968 - Phosphoserine phosphatase, at 3,083,398 to 3,084,618 _02968 MPMX26_02969: MPMX26_02969 - hypothetical protein, at 3,084,696 to 3,085,961 _02969 Position (kb) 3083 3084 3085Strain fitness (log2 ratio) -7 -6 -5 -4 -3 -2 -1 0 1 2at 3082.398 kb on - strand, within MPMX26_02966at 3082.418 kb on - strand, within MPMX26_02966at 3082.418 kb on - strand, within MPMX26_02966at 3082.418 kb on - strand, within MPMX26_02966at 3082.418 kb on - strand, within MPMX26_02966at 3082.419 kb on - strand, within MPMX26_02966at 3082.448 kb on - strand, within MPMX26_02966at 3082.448 kb on - strand, within MPMX26_02966at 3082.453 kb on - strandat 3082.453 kb on - strandat 3082.453 kb on - strandat 3082.453 kb on - strandat 3082.464 kb on - strandat 3082.464 kb on - strandat 3082.481 kb on - strandat 3082.626 kb on - strandat 3082.653 kb on - strandat 3082.655 kb on + strandat 3082.665 kb on - strandat 3082.675 kb on - strandat 3082.710 kb on - strand, within MPMX26_02967at 3082.712 kb on - strand, within MPMX26_02967at 3082.730 kb on - strand, within MPMX26_02967at 3082.747 kb on - strand, within MPMX26_02967at 3082.747 kb on - strand, within MPMX26_02967at 3082.763 kb on - strand, within MPMX26_02967at 3082.770 kb on - strand, within MPMX26_02967at 3082.779 kb on - strand, within MPMX26_02967at 3082.783 kb on - strand, within MPMX26_02967at 3082.785 kb on - strand, within MPMX26_02967at 3082.790 kb on - strand, within MPMX26_02967at 3082.826 kb on - strand, within MPMX26_02967at 3082.857 kb on - strand, within MPMX26_02967at 3082.859 kb on - strand, within MPMX26_02967at 3082.869 kb on - strand, within MPMX26_02967at 3082.869 kb on - strand, within MPMX26_02967at 3082.869 kb on - strand, within MPMX26_02967at 3082.871 kb on - strand, within MPMX26_02967at 3082.879 kb on - strand, within MPMX26_02967at 3082.891 kb on - strand, within MPMX26_02967at 3082.891 kb on - strand, within MPMX26_02967at 3082.891 kb on - strand, within MPMX26_02967at 3082.891 kb on - strand, within MPMX26_02967at 3082.891 kb on - strand, within MPMX26_02967at 3082.891 kb on - strand, within MPMX26_02967at 3082.891 kb on - strand, within MPMX26_02967at 3082.891 kb on - strand, within MPMX26_02967at 3082.891 kb on - strand, within MPMX26_02967at 3082.891 kb on - strand, within MPMX26_02967at 3082.891 kb on - strand, within MPMX26_02967at 3082.891 kb on - strand, within MPMX26_02967at 3082.891 kb on - strand, within MPMX26_02967at 3082.917 kb on - strand, within MPMX26_02967at 3083.018 kb on - strandat 3083.029 kb on - strandat 3083.030 kb on - strandat 3083.039 kb on - strandat 3083.089 kb on - strandat 3083.089 kb on - strandat 3083.201 kb on + strandat 3083.214 kb on - strandat 3083.216 kb on + strandat 3083.224 kb on - strandat 3083.230 kb on - strandat 3083.370 kb on - strandat 3083.370 kb on - strandat 3083.372 kb on - strandat 3083.393 kb on - strandat 3083.395 kb on - strandat 3083.405 kb on + strandat 3083.407 kb on + strandat 3083.415 kb on - strandat 3083.429 kb on - strandat 3083.445 kb on - strandat 3083.456 kb on - strandat 3083.457 kb on - strandat 3083.483 kb on - strandat 3083.499 kb on - strandat 3083.526 kb on - strand, within MPMX26_02968at 3083.539 kb on - strand, within MPMX26_02968at 3083.578 kb on - strand, within MPMX26_02968at 3083.628 kb on - strand, within MPMX26_02968at 3083.628 kb on - strand, within MPMX26_02968at 3083.709 kb on - strand, within MPMX26_02968at 3083.709 kb on - strand, within MPMX26_02968at 3083.720 kb on - strand, within MPMX26_02968at 3083.720 kb on - strand, within MPMX26_02968at 3083.759 kb on - strand, within MPMX26_02968at 3083.793 kb on - strand, within MPMX26_02968at 3083.793 kb on - strand, within MPMX26_02968at 3083.814 kb on - strand, within MPMX26_02968at 3083.822 kb on - strand, within MPMX26_02968at 3083.822 kb on - strand, within MPMX26_02968at 3083.822 kb on - strand, within MPMX26_02968at 3083.824 kb on - strand, within MPMX26_02968at 3083.824 kb on - strand, within MPMX26_02968at 3083.830 kb on - strand, within MPMX26_02968at 3083.832 kb on - strand, within MPMX26_02968at 3083.832 kb on - strand, within MPMX26_02968at 3083.832 kb on - strand, within MPMX26_02968at 3083.832 kb on - strand, within MPMX26_02968at 3083.834 kb on - strand, within MPMX26_02968at 3083.834 kb on - strand, within MPMX26_02968at 3083.834 kb on - strand, within MPMX26_02968at 3083.836 kb on - strand, within MPMX26_02968at 3083.877 kb on - strand, within MPMX26_02968at 3083.877 kb on - strand, within MPMX26_02968at 3083.877 kb on - strand, within MPMX26_02968at 3083.884 kb on - strand, within MPMX26_02968at 3083.884 kb on - strand, within MPMX26_02968at 3083.884 kb on - strand, within MPMX26_02968at 3083.884 kb on - strand, within MPMX26_02968at 3083.884 kb on - strand, within MPMX26_02968at 3083.884 kb on - strand, within MPMX26_02968at 3083.894 kb on - strand, within MPMX26_02968at 3083.894 kb on - strand, within MPMX26_02968at 3083.894 kb on - strand, within MPMX26_02968at 3083.939 kb on - strand, within MPMX26_02968at 3083.966 kb on - strand, within MPMX26_02968at 3083.966 kb on - strand, within MPMX26_02968at 3083.978 kb on - strand, within MPMX26_02968at 3084.017 kb on - strand, within MPMX26_02968at 3084.025 kb on - strand, within MPMX26_02968at 3084.035 kb on - strand, within MPMX26_02968at 3084.040 kb on - strand, within MPMX26_02968at 3084.070 kb on - strand, within MPMX26_02968at 3084.070 kb on - strand, within MPMX26_02968at 3084.075 kb on - strand, within MPMX26_02968at 3084.078 kb on - strand, within MPMX26_02968at 3084.097 kb on - strand, within MPMX26_02968at 3084.104 kb on - strand, within MPMX26_02968at 3084.109 kb on - strand, within MPMX26_02968at 3084.109 kb on - strand, within MPMX26_02968at 3084.109 kb on - strand, within MPMX26_02968at 3084.109 kb on - strand, within MPMX26_02968at 3084.109 kb on - strand, within MPMX26_02968at 3084.116 kb on - strand, within MPMX26_02968at 3084.116 kb on - strand, within MPMX26_02968at 3084.116 kb on - strand, within MPMX26_02968at 3084.116 kb on - strand, within MPMX26_02968at 3084.132 kb on - strand, within MPMX26_02968at 3084.152 kb on - strand, within MPMX26_02968at 3084.171 kb on - strand, within MPMX26_02968at 3084.176 kb on - strand, within MPMX26_02968at 3084.183 kb on - strand, within MPMX26_02968at 3084.189 kb on - strand, within MPMX26_02968at 3084.193 kb on - strand, within MPMX26_02968at 3084.210 kb on - strand, within MPMX26_02968at 3084.210 kb on - strand, within MPMX26_02968at 3084.215 kb on - strand, within MPMX26_02968at 3084.257 kb on - strand, within MPMX26_02968at 3084.258 kb on - strand, within MPMX26_02968at 3084.306 kb on - strand, within MPMX26_02968at 3084.308 kb on - strand, within MPMX26_02968at 3084.308 kb on - strand, within MPMX26_02968at 3084.332 kb on - strand, within MPMX26_02968at 3084.353 kb on - strand, within MPMX26_02968at 3084.353 kb on - strand, within MPMX26_02968at 3084.353 kb on - strand, within MPMX26_02968at 3084.371 kb on - strand, within MPMX26_02968at 3084.388 kb on - strand, within MPMX26_02968at 3084.388 kb on - strand, within MPMX26_02968at 3084.388 kb on - strand, within MPMX26_02968at 3084.402 kb on - strand, within MPMX26_02968at 3084.402 kb on - strand, within MPMX26_02968at 3084.454 kb on - strand, within MPMX26_02968at 3084.486 kb on - strand, within MPMX26_02968at 3084.486 kb on - strand, within MPMX26_02968at 3084.486 kb on - strand, within MPMX26_02968at 3084.486 kb on - strand, within MPMX26_02968at 3084.550 kb on - strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction Ethanolamine (N)
remove
3,082,398 - MPMX26_02966 0.79 +0.5
3,082,418 - MPMX26_02966 0.83 +1.1
3,082,418 - MPMX26_02966 0.83 -0.1
3,082,418 - MPMX26_02966 0.83 +0.5
3,082,418 - MPMX26_02966 0.83 +1.3
3,082,419 - MPMX26_02966 0.84 +1.5
3,082,448 - MPMX26_02966 0.90 +2.6
3,082,448 - MPMX26_02966 0.90 -0.3
3,082,453 - +1.0
3,082,453 - +1.1
3,082,453 - +0.2
3,082,453 - +1.2
3,082,464 - +0.9
3,082,464 - +1.1
3,082,481 - +0.2
3,082,626 - -0.3
3,082,653 - +1.0
3,082,655 + +0.0
3,082,665 - +0.9
3,082,675 - -0.1
3,082,710 - MPMX26_02967 0.18 +0.4
3,082,712 - MPMX26_02967 0.18 +0.5
3,082,730 - MPMX26_02967 0.24 +0.2
3,082,747 - MPMX26_02967 0.29 -0.0
3,082,747 - MPMX26_02967 0.29 +0.5
3,082,763 - MPMX26_02967 0.34 +0.4
3,082,770 - MPMX26_02967 0.36 +0.1
3,082,779 - MPMX26_02967 0.38 +0.6
3,082,783 - MPMX26_02967 0.40 +0.5
3,082,785 - MPMX26_02967 0.40 +0.8
3,082,790 - MPMX26_02967 0.42 -0.1
3,082,826 - MPMX26_02967 0.52 -0.2
3,082,857 - MPMX26_02967 0.62 -0.0
3,082,859 - MPMX26_02967 0.62 +0.1
3,082,869 - MPMX26_02967 0.65 -0.1
3,082,869 - MPMX26_02967 0.65 +0.2
3,082,869 - MPMX26_02967 0.65 -0.4
3,082,871 - MPMX26_02967 0.66 +0.1
3,082,879 - MPMX26_02967 0.68 -0.0
3,082,891 - MPMX26_02967 0.72 +0.2
3,082,891 - MPMX26_02967 0.72 -0.7
3,082,891 - MPMX26_02967 0.72 -1.9
3,082,891 - MPMX26_02967 0.72 -0.0
3,082,891 - MPMX26_02967 0.72 +0.2
3,082,891 - MPMX26_02967 0.72 -0.1
3,082,891 - MPMX26_02967 0.72 -0.6
3,082,891 - MPMX26_02967 0.72 +0.3
3,082,891 - MPMX26_02967 0.72 +1.1
3,082,891 - MPMX26_02967 0.72 +0.0
3,082,891 - MPMX26_02967 0.72 -0.1
3,082,891 - MPMX26_02967 0.72 -0.6
3,082,891 - MPMX26_02967 0.72 -0.1
3,082,917 - MPMX26_02967 0.79 -0.1
3,083,018 - +0.2
3,083,029 - +0.2
3,083,030 - +0.3
3,083,039 - +0.1
3,083,089 - -1.5
3,083,089 - +0.8
3,083,201 + +0.3
3,083,214 - +1.1
3,083,216 + +0.1
3,083,224 - +1.2
3,083,230 - +1.4
3,083,370 - -1.0
3,083,370 - +0.4
3,083,372 - +1.2
3,083,393 - +0.1
3,083,395 - -0.3
3,083,405 + -5.9
3,083,407 + -2.3
3,083,415 - -2.0
3,083,429 - -0.5
3,083,445 - -1.5
3,083,456 - -4.9
3,083,457 - -3.9
3,083,483 - -4.4
3,083,499 - -6.0
3,083,526 - MPMX26_02968 0.10 -6.0
3,083,539 - MPMX26_02968 0.12 -4.4
3,083,578 - MPMX26_02968 0.15 -4.6
3,083,628 - MPMX26_02968 0.19 -4.4
3,083,628 - MPMX26_02968 0.19 -1.6
3,083,709 - MPMX26_02968 0.25 -3.9
3,083,709 - MPMX26_02968 0.25 -5.8
3,083,720 - MPMX26_02968 0.26 -2.7
3,083,720 - MPMX26_02968 0.26 -2.5
3,083,759 - MPMX26_02968 0.30 -4.4
3,083,793 - MPMX26_02968 0.32 -5.1
3,083,793 - MPMX26_02968 0.32 -4.4
3,083,814 - MPMX26_02968 0.34 -2.1
3,083,822 - MPMX26_02968 0.35 -2.8
3,083,822 - MPMX26_02968 0.35 -4.6
3,083,822 - MPMX26_02968 0.35 -4.9
3,083,824 - MPMX26_02968 0.35 -4.3
3,083,824 - MPMX26_02968 0.35 -4.1
3,083,830 - MPMX26_02968 0.35 -4.8
3,083,832 - MPMX26_02968 0.36 -7.1
3,083,832 - MPMX26_02968 0.36 -5.0
3,083,832 - MPMX26_02968 0.36 -3.9
3,083,832 - MPMX26_02968 0.36 -4.6
3,083,834 - MPMX26_02968 0.36 -2.0
3,083,834 - MPMX26_02968 0.36 -4.4
3,083,834 - MPMX26_02968 0.36 -1.6
3,083,836 - MPMX26_02968 0.36 -2.7
3,083,877 - MPMX26_02968 0.39 -4.9
3,083,877 - MPMX26_02968 0.39 -3.5
3,083,877 - MPMX26_02968 0.39 -4.1
3,083,884 - MPMX26_02968 0.40 -3.5
3,083,884 - MPMX26_02968 0.40 -4.0
3,083,884 - MPMX26_02968 0.40 -4.3
3,083,884 - MPMX26_02968 0.40 -4.1
3,083,884 - MPMX26_02968 0.40 -4.6
3,083,884 - MPMX26_02968 0.40 -3.8
3,083,894 - MPMX26_02968 0.41 -4.1
3,083,894 - MPMX26_02968 0.41 -4.8
3,083,894 - MPMX26_02968 0.41 -4.5
3,083,939 - MPMX26_02968 0.44 -3.6
3,083,966 - MPMX26_02968 0.47 -5.0
3,083,966 - MPMX26_02968 0.47 -4.7
3,083,978 - MPMX26_02968 0.48 -3.3
3,084,017 - MPMX26_02968 0.51 -4.8
3,084,025 - MPMX26_02968 0.51 -6.1
3,084,035 - MPMX26_02968 0.52 -4.9
3,084,040 - MPMX26_02968 0.53 -5.7
3,084,070 - MPMX26_02968 0.55 -5.0
3,084,070 - MPMX26_02968 0.55 -3.6
3,084,075 - MPMX26_02968 0.55 -4.4
3,084,078 - MPMX26_02968 0.56 -1.5
3,084,097 - MPMX26_02968 0.57 -5.1
3,084,104 - MPMX26_02968 0.58 -2.9
3,084,109 - MPMX26_02968 0.58 -4.2
3,084,109 - MPMX26_02968 0.58 -3.2
3,084,109 - MPMX26_02968 0.58 -4.0
3,084,109 - MPMX26_02968 0.58 -3.8
3,084,109 - MPMX26_02968 0.58 -4.6
3,084,116 - MPMX26_02968 0.59 -3.5
3,084,116 - MPMX26_02968 0.59 -3.3
3,084,116 - MPMX26_02968 0.59 -4.3
3,084,116 - MPMX26_02968 0.59 -4.6
3,084,132 - MPMX26_02968 0.60 -5.2
3,084,152 - MPMX26_02968 0.62 -3.6
3,084,171 - MPMX26_02968 0.63 -3.3
3,084,176 - MPMX26_02968 0.64 -3.4
3,084,183 - MPMX26_02968 0.64 -5.4
3,084,189 - MPMX26_02968 0.65 -1.8
3,084,193 - MPMX26_02968 0.65 -5.0
3,084,210 - MPMX26_02968 0.67 -6.3
3,084,210 - MPMX26_02968 0.67 -3.8
3,084,215 - MPMX26_02968 0.67 -3.2
3,084,257 - MPMX26_02968 0.70 -1.9
3,084,258 - MPMX26_02968 0.70 -1.1
3,084,306 - MPMX26_02968 0.74 -4.6
3,084,308 - MPMX26_02968 0.75 -3.1
3,084,308 - MPMX26_02968 0.75 -4.5
3,084,332 - MPMX26_02968 0.76 -4.1
3,084,353 - MPMX26_02968 0.78 -4.8
3,084,353 - MPMX26_02968 0.78 -1.9
3,084,353 - MPMX26_02968 0.78 -3.7
3,084,371 - MPMX26_02968 0.80 -2.5
3,084,388 - MPMX26_02968 0.81 -4.5
3,084,388 - MPMX26_02968 0.81 -4.6
3,084,388 - MPMX26_02968 0.81 -4.6
3,084,402 - MPMX26_02968 0.82 -5.8
3,084,402 - MPMX26_02968 0.82 -4.3
3,084,454 - MPMX26_02968 0.86 -1.6
3,084,486 - MPMX26_02968 0.89 -0.5
3,084,486 - MPMX26_02968 0.89 -2.3
3,084,486 - MPMX26_02968 0.89 -1.6
3,084,486 - MPMX26_02968 0.89 -3.4
3,084,550 - -2.6

Or see this region's nucleotide sequence