Experiment: Ethanolamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02861 and MPMX26_02862 are separated by 108 nucleotides MPMX26_02862 and MPMX26_02863 are separated by 75 nucleotides MPMX26_02863 and MPMX26_02864 are separated by 9 nucleotides
MPMX26_02861: MPMX26_02861 - Prophage integrase IntS, at 2,951,018 to 2,952,214
_02861
MPMX26_02862: MPMX26_02862 - hypothetical protein, at 2,952,323 to 2,952,916
_02862
MPMX26_02863: MPMX26_02863 - RNA polymerase-associated protein RapA, at 2,952,992 to 2,956,195
_02863
MPMX26_02864: MPMX26_02864 - hypothetical protein, at 2,956,205 to 2,957,644
_02864
Position (kb)
2952
2953
2954
2955
2956
2957 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2952.006 kb on + strand, within MPMX26_02861 at 2952.023 kb on - strand, within MPMX26_02861 at 2952.079 kb on + strand, within MPMX26_02861 at 2952.091 kb on + strand, within MPMX26_02861 at 2952.091 kb on + strand, within MPMX26_02861 at 2952.110 kb on + strand at 2952.199 kb on + strand at 2952.199 kb on + strand at 2952.357 kb on + strand at 2952.367 kb on + strand at 2952.386 kb on + strand, within MPMX26_02862 at 2952.398 kb on + strand, within MPMX26_02862 at 2952.398 kb on + strand, within MPMX26_02862 at 2952.400 kb on + strand, within MPMX26_02862 at 2952.408 kb on + strand, within MPMX26_02862 at 2952.595 kb on + strand, within MPMX26_02862 at 2952.609 kb on + strand, within MPMX26_02862 at 2952.609 kb on + strand, within MPMX26_02862 at 2952.609 kb on + strand, within MPMX26_02862 at 2952.639 kb on + strand, within MPMX26_02862 at 2952.657 kb on + strand, within MPMX26_02862 at 2952.658 kb on + strand, within MPMX26_02862 at 2952.665 kb on + strand, within MPMX26_02862 at 2952.679 kb on + strand, within MPMX26_02862 at 2952.692 kb on + strand, within MPMX26_02862 at 2952.723 kb on + strand, within MPMX26_02862 at 2952.728 kb on + strand, within MPMX26_02862 at 2952.728 kb on + strand, within MPMX26_02862 at 2952.730 kb on + strand, within MPMX26_02862 at 2953.034 kb on - strand at 2953.058 kb on - strand at 2953.058 kb on - strand at 2953.169 kb on - strand at 2953.169 kb on - strand at 2953.429 kb on - strand, within MPMX26_02863 at 2953.560 kb on - strand, within MPMX26_02863 at 2953.565 kb on - strand, within MPMX26_02863 at 2953.631 kb on - strand, within MPMX26_02863 at 2953.655 kb on - strand, within MPMX26_02863 at 2953.655 kb on - strand, within MPMX26_02863 at 2953.655 kb on - strand, within MPMX26_02863 at 2953.756 kb on - strand, within MPMX26_02863 at 2953.926 kb on - strand, within MPMX26_02863 at 2953.943 kb on - strand, within MPMX26_02863 at 2953.943 kb on - strand, within MPMX26_02863 at 2954.150 kb on - strand, within MPMX26_02863 at 2954.216 kb on - strand, within MPMX26_02863 at 2954.216 kb on - strand, within MPMX26_02863 at 2954.216 kb on - strand, within MPMX26_02863 at 2954.363 kb on - strand, within MPMX26_02863 at 2954.363 kb on - strand, within MPMX26_02863 at 2954.363 kb on - strand, within MPMX26_02863 at 2954.495 kb on - strand, within MPMX26_02863 at 2954.495 kb on - strand, within MPMX26_02863 at 2954.593 kb on - strand, within MPMX26_02863 at 2954.627 kb on - strand, within MPMX26_02863 at 2954.627 kb on - strand, within MPMX26_02863 at 2954.627 kb on - strand, within MPMX26_02863 at 2954.732 kb on + strand, within MPMX26_02863 at 2954.771 kb on - strand, within MPMX26_02863 at 2954.781 kb on - strand, within MPMX26_02863 at 2954.799 kb on - strand, within MPMX26_02863 at 2954.896 kb on - strand, within MPMX26_02863 at 2954.950 kb on - strand, within MPMX26_02863 at 2954.966 kb on - strand, within MPMX26_02863 at 2955.023 kb on - strand, within MPMX26_02863 at 2955.125 kb on - strand, within MPMX26_02863 at 2955.125 kb on - strand, within MPMX26_02863 at 2955.135 kb on - strand, within MPMX26_02863 at 2955.292 kb on - strand, within MPMX26_02863 at 2955.298 kb on - strand, within MPMX26_02863 at 2955.298 kb on - strand, within MPMX26_02863 at 2955.300 kb on - strand, within MPMX26_02863 at 2955.304 kb on - strand, within MPMX26_02863 at 2955.321 kb on - strand, within MPMX26_02863 at 2955.361 kb on - strand, within MPMX26_02863 at 2955.368 kb on - strand, within MPMX26_02863 at 2955.368 kb on - strand, within MPMX26_02863 at 2955.368 kb on - strand, within MPMX26_02863 at 2955.453 kb on - strand, within MPMX26_02863 at 2955.463 kb on - strand, within MPMX26_02863 at 2955.479 kb on - strand, within MPMX26_02863 at 2955.479 kb on - strand, within MPMX26_02863 at 2955.479 kb on - strand, within MPMX26_02863 at 2955.606 kb on - strand, within MPMX26_02863 at 2955.614 kb on - strand, within MPMX26_02863 at 2955.646 kb on - strand, within MPMX26_02863 at 2955.745 kb on - strand, within MPMX26_02863 at 2955.745 kb on - strand, within MPMX26_02863 at 2955.811 kb on - strand, within MPMX26_02863 at 2955.835 kb on - strand, within MPMX26_02863 at 2955.880 kb on - strand at 2955.999 kb on - strand at 2956.001 kb on - strand at 2956.015 kb on - strand at 2956.094 kb on - strand at 2956.094 kb on - strand at 2956.099 kb on - strand at 2956.110 kb on - strand at 2956.128 kb on - strand at 2956.128 kb on - strand at 2956.235 kb on - strand at 2956.327 kb on - strand at 2956.367 kb on - strand, within MPMX26_02864 at 2956.367 kb on - strand, within MPMX26_02864 at 2956.489 kb on - strand, within MPMX26_02864 at 2956.507 kb on - strand, within MPMX26_02864 at 2956.563 kb on - strand, within MPMX26_02864 at 2956.684 kb on - strand, within MPMX26_02864 at 2956.698 kb on - strand, within MPMX26_02864 at 2956.744 kb on - strand, within MPMX26_02864 at 2956.744 kb on - strand, within MPMX26_02864 at 2956.772 kb on - strand, within MPMX26_02864 at 2956.780 kb on - strand, within MPMX26_02864 at 2956.801 kb on - strand, within MPMX26_02864 at 2956.847 kb on - strand, within MPMX26_02864 at 2957.039 kb on - strand, within MPMX26_02864 at 2957.039 kb on - strand, within MPMX26_02864 at 2957.048 kb on - strand, within MPMX26_02864 at 2957.048 kb on - strand, within MPMX26_02864 at 2957.095 kb on - strand, within MPMX26_02864 at 2957.103 kb on - strand, within MPMX26_02864 at 2957.113 kb on - strand, within MPMX26_02864
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanolamine (N) remove 2,952,006 + MPMX26_02861 0.83 -0.9 2,952,023 - MPMX26_02861 0.84 -1.1 2,952,079 + MPMX26_02861 0.89 +1.0 2,952,091 + MPMX26_02861 0.90 +0.2 2,952,091 + MPMX26_02861 0.90 +0.4 2,952,110 + +0.4 2,952,199 + -0.1 2,952,199 + +0.3 2,952,357 + -0.2 2,952,367 + -0.3 2,952,386 + MPMX26_02862 0.11 -0.4 2,952,398 + MPMX26_02862 0.13 +0.6 2,952,398 + MPMX26_02862 0.13 -0.3 2,952,400 + MPMX26_02862 0.13 +0.2 2,952,408 + MPMX26_02862 0.14 +0.2 2,952,595 + MPMX26_02862 0.46 +0.0 2,952,609 + MPMX26_02862 0.48 -0.4 2,952,609 + MPMX26_02862 0.48 +0.3 2,952,609 + MPMX26_02862 0.48 +0.1 2,952,639 + MPMX26_02862 0.53 +0.0 2,952,657 + MPMX26_02862 0.56 +0.8 2,952,658 + MPMX26_02862 0.56 +0.3 2,952,665 + MPMX26_02862 0.58 -0.8 2,952,679 + MPMX26_02862 0.60 +0.9 2,952,692 + MPMX26_02862 0.62 -0.5 2,952,723 + MPMX26_02862 0.67 +0.3 2,952,728 + MPMX26_02862 0.68 +0.8 2,952,728 + MPMX26_02862 0.68 -1.1 2,952,730 + MPMX26_02862 0.69 +1.3 2,953,034 - +1.0 2,953,058 - +0.4 2,953,058 - +0.7 2,953,169 - -0.1 2,953,169 - +0.9 2,953,429 - MPMX26_02863 0.14 +0.4 2,953,560 - MPMX26_02863 0.18 -0.0 2,953,565 - MPMX26_02863 0.18 +0.3 2,953,631 - MPMX26_02863 0.20 -0.1 2,953,655 - MPMX26_02863 0.21 -0.6 2,953,655 - MPMX26_02863 0.21 +0.1 2,953,655 - MPMX26_02863 0.21 -0.3 2,953,756 - MPMX26_02863 0.24 -0.7 2,953,926 - MPMX26_02863 0.29 -0.2 2,953,943 - MPMX26_02863 0.30 +0.1 2,953,943 - MPMX26_02863 0.30 +0.3 2,954,150 - MPMX26_02863 0.36 -1.3 2,954,216 - MPMX26_02863 0.38 -0.2 2,954,216 - MPMX26_02863 0.38 +0.0 2,954,216 - MPMX26_02863 0.38 +0.5 2,954,363 - MPMX26_02863 0.43 -0.4 2,954,363 - MPMX26_02863 0.43 -2.0 2,954,363 - MPMX26_02863 0.43 +1.1 2,954,495 - MPMX26_02863 0.47 -1.1 2,954,495 - MPMX26_02863 0.47 +0.3 2,954,593 - MPMX26_02863 0.50 +1.1 2,954,627 - MPMX26_02863 0.51 +0.8 2,954,627 - MPMX26_02863 0.51 +0.8 2,954,627 - MPMX26_02863 0.51 +1.5 2,954,732 + MPMX26_02863 0.54 -1.1 2,954,771 - MPMX26_02863 0.56 +0.6 2,954,781 - MPMX26_02863 0.56 -1.5 2,954,799 - MPMX26_02863 0.56 +0.3 2,954,896 - MPMX26_02863 0.59 -0.3 2,954,950 - MPMX26_02863 0.61 -0.5 2,954,966 - MPMX26_02863 0.62 -0.5 2,955,023 - MPMX26_02863 0.63 -1.3 2,955,125 - MPMX26_02863 0.67 +1.5 2,955,125 - MPMX26_02863 0.67 +1.1 2,955,135 - MPMX26_02863 0.67 -0.4 2,955,292 - MPMX26_02863 0.72 +0.9 2,955,298 - MPMX26_02863 0.72 -1.9 2,955,298 - MPMX26_02863 0.72 -1.1 2,955,300 - MPMX26_02863 0.72 -0.3 2,955,304 - MPMX26_02863 0.72 -0.5 2,955,321 - MPMX26_02863 0.73 +1.2 2,955,361 - MPMX26_02863 0.74 -0.3 2,955,368 - MPMX26_02863 0.74 +0.0 2,955,368 - MPMX26_02863 0.74 +0.9 2,955,368 - MPMX26_02863 0.74 -0.3 2,955,453 - MPMX26_02863 0.77 -0.5 2,955,463 - MPMX26_02863 0.77 -0.7 2,955,479 - MPMX26_02863 0.78 -1.6 2,955,479 - MPMX26_02863 0.78 -0.2 2,955,479 - MPMX26_02863 0.78 +0.2 2,955,606 - MPMX26_02863 0.82 +1.9 2,955,614 - MPMX26_02863 0.82 +0.4 2,955,646 - MPMX26_02863 0.83 -0.5 2,955,745 - MPMX26_02863 0.86 +0.3 2,955,745 - MPMX26_02863 0.86 -1.3 2,955,811 - MPMX26_02863 0.88 -1.1 2,955,835 - MPMX26_02863 0.89 -0.4 2,955,880 - -0.2 2,955,999 - -0.8 2,956,001 - +0.1 2,956,015 - -0.6 2,956,094 - +0.1 2,956,094 - +0.1 2,956,099 - -0.2 2,956,110 - +0.7 2,956,128 - -0.7 2,956,128 - -1.1 2,956,235 - +1.1 2,956,327 - +0.6 2,956,367 - MPMX26_02864 0.11 +1.1 2,956,367 - MPMX26_02864 0.11 +1.7 2,956,489 - MPMX26_02864 0.20 +0.6 2,956,507 - MPMX26_02864 0.21 +0.7 2,956,563 - MPMX26_02864 0.25 -0.3 2,956,684 - MPMX26_02864 0.33 +0.4 2,956,698 - MPMX26_02864 0.34 +0.9 2,956,744 - MPMX26_02864 0.37 +0.7 2,956,744 - MPMX26_02864 0.37 -1.6 2,956,772 - MPMX26_02864 0.39 +0.3 2,956,780 - MPMX26_02864 0.40 -0.5 2,956,801 - MPMX26_02864 0.41 +0.9 2,956,847 - MPMX26_02864 0.45 -0.8 2,957,039 - MPMX26_02864 0.58 +0.1 2,957,039 - MPMX26_02864 0.58 +0.4 2,957,048 - MPMX26_02864 0.59 -0.2 2,957,048 - MPMX26_02864 0.59 -0.5 2,957,095 - MPMX26_02864 0.62 -0.1 2,957,103 - MPMX26_02864 0.62 +0.1 2,957,113 - MPMX26_02864 0.63 -0.2
Or see this region's nucleotide sequence