Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02855

Experiment: Ethanolamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02854 and MPMX26_02855 are separated by 323 nucleotidesMPMX26_02855 and MPMX26_02856 are separated by 114 nucleotides MPMX26_02854: MPMX26_02854 - Imidazole glycerol phosphate synthase subunit HisF, at 2,944,313 to 2,945,071 _02854 MPMX26_02855: MPMX26_02855 - hypothetical protein, at 2,945,395 to 2,946,039 _02855 MPMX26_02856: MPMX26_02856 - hypothetical protein, at 2,946,154 to 2,947,161 _02856 Position (kb) 2945 2946 2947Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2at 2944.400 kb on + strand, within MPMX26_02854at 2944.400 kb on + strand, within MPMX26_02854at 2944.408 kb on + strand, within MPMX26_02854at 2944.413 kb on + strand, within MPMX26_02854at 2944.448 kb on + strand, within MPMX26_02854at 2944.489 kb on + strand, within MPMX26_02854at 2944.489 kb on + strand, within MPMX26_02854at 2944.489 kb on + strand, within MPMX26_02854at 2944.489 kb on + strand, within MPMX26_02854at 2944.508 kb on + strand, within MPMX26_02854at 2944.508 kb on + strand, within MPMX26_02854at 2944.508 kb on + strand, within MPMX26_02854at 2944.515 kb on + strand, within MPMX26_02854at 2944.516 kb on - strand, within MPMX26_02854at 2944.539 kb on + strand, within MPMX26_02854at 2944.567 kb on + strand, within MPMX26_02854at 2944.658 kb on + strand, within MPMX26_02854at 2944.658 kb on + strand, within MPMX26_02854at 2944.683 kb on + strand, within MPMX26_02854at 2944.683 kb on + strand, within MPMX26_02854at 2944.755 kb on + strand, within MPMX26_02854at 2944.764 kb on + strand, within MPMX26_02854at 2944.801 kb on + strand, within MPMX26_02854at 2944.856 kb on + strand, within MPMX26_02854at 2944.863 kb on + strand, within MPMX26_02854at 2944.868 kb on + strand, within MPMX26_02854at 2944.868 kb on + strand, within MPMX26_02854at 2944.932 kb on + strand, within MPMX26_02854at 2944.974 kb on + strand, within MPMX26_02854at 2944.979 kb on + strand, within MPMX26_02854at 2945.030 kb on + strandat 2945.045 kb on + strandat 2945.052 kb on + strandat 2945.052 kb on + strandat 2945.213 kb on - strandat 2945.433 kb on - strandat 2945.434 kb on - strandat 2945.440 kb on - strandat 2945.573 kb on - strand, within MPMX26_02855at 2945.757 kb on - strand, within MPMX26_02855at 2945.768 kb on + strand, within MPMX26_02855at 2945.775 kb on - strand, within MPMX26_02855at 2945.793 kb on - strand, within MPMX26_02855at 2945.847 kb on - strand, within MPMX26_02855at 2945.847 kb on - strand, within MPMX26_02855at 2945.847 kb on - strand, within MPMX26_02855at 2945.884 kb on - strand, within MPMX26_02855at 2945.908 kb on - strand, within MPMX26_02855at 2945.971 kb on - strand, within MPMX26_02855at 2945.999 kb on - strandat 2946.018 kb on - strandat 2946.184 kb on + strandat 2946.340 kb on + strand, within MPMX26_02856at 2946.340 kb on + strand, within MPMX26_02856at 2946.372 kb on + strand, within MPMX26_02856at 2946.496 kb on + strand, within MPMX26_02856at 2946.534 kb on + strand, within MPMX26_02856at 2946.708 kb on + strand, within MPMX26_02856at 2946.753 kb on + strand, within MPMX26_02856at 2946.763 kb on + strand, within MPMX26_02856at 2946.805 kb on + strand, within MPMX26_02856at 2946.847 kb on + strand, within MPMX26_02856at 2947.024 kb on + strand, within MPMX26_02856at 2947.024 kb on + strand, within MPMX26_02856

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Per-strain Table

Position Strand Gene LocusTag Fraction Ethanolamine (N)
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2,944,400 + MPMX26_02854 0.11 -2.6
2,944,400 + MPMX26_02854 0.11 -2.4
2,944,408 + MPMX26_02854 0.13 -1.5
2,944,413 + MPMX26_02854 0.13 -4.0
2,944,448 + MPMX26_02854 0.18 -2.4
2,944,489 + MPMX26_02854 0.23 -4.0
2,944,489 + MPMX26_02854 0.23 -3.1
2,944,489 + MPMX26_02854 0.23 -1.5
2,944,489 + MPMX26_02854 0.23 -4.3
2,944,508 + MPMX26_02854 0.26 -2.3
2,944,508 + MPMX26_02854 0.26 -2.4
2,944,508 + MPMX26_02854 0.26 -2.1
2,944,515 + MPMX26_02854 0.27 -2.8
2,944,516 - MPMX26_02854 0.27 -3.6
2,944,539 + MPMX26_02854 0.30 -3.8
2,944,567 + MPMX26_02854 0.33 -4.4
2,944,658 + MPMX26_02854 0.45 -3.8
2,944,658 + MPMX26_02854 0.45 -4.6
2,944,683 + MPMX26_02854 0.49 -3.7
2,944,683 + MPMX26_02854 0.49 -3.2
2,944,755 + MPMX26_02854 0.58 -3.5
2,944,764 + MPMX26_02854 0.59 -3.7
2,944,801 + MPMX26_02854 0.64 -4.2
2,944,856 + MPMX26_02854 0.72 -3.6
2,944,863 + MPMX26_02854 0.72 -2.4
2,944,868 + MPMX26_02854 0.73 -3.2
2,944,868 + MPMX26_02854 0.73 -4.0
2,944,932 + MPMX26_02854 0.82 -2.6
2,944,974 + MPMX26_02854 0.87 -1.5
2,944,979 + MPMX26_02854 0.88 -2.8
2,945,030 + -2.2
2,945,045 + -4.9
2,945,052 + -3.8
2,945,052 + -3.5
2,945,213 - +0.6
2,945,433 - -0.1
2,945,434 - +0.1
2,945,440 - +0.2
2,945,573 - MPMX26_02855 0.28 +0.2
2,945,757 - MPMX26_02855 0.56 +0.2
2,945,768 + MPMX26_02855 0.58 -0.1
2,945,775 - MPMX26_02855 0.59 +0.2
2,945,793 - MPMX26_02855 0.62 +0.2
2,945,847 - MPMX26_02855 0.70 -1.3
2,945,847 - MPMX26_02855 0.70 +2.7
2,945,847 - MPMX26_02855 0.70 -0.1
2,945,884 - MPMX26_02855 0.76 +1.1
2,945,908 - MPMX26_02855 0.80 -0.6
2,945,971 - MPMX26_02855 0.89 -0.5
2,945,999 - +0.1
2,946,018 - +1.3
2,946,184 + +0.7
2,946,340 + MPMX26_02856 0.18 -0.2
2,946,340 + MPMX26_02856 0.18 +0.3
2,946,372 + MPMX26_02856 0.22 +0.4
2,946,496 + MPMX26_02856 0.34 +0.5
2,946,534 + MPMX26_02856 0.38 -2.2
2,946,708 + MPMX26_02856 0.55 +1.0
2,946,753 + MPMX26_02856 0.59 +0.2
2,946,763 + MPMX26_02856 0.60 +1.1
2,946,805 + MPMX26_02856 0.65 -0.3
2,946,847 + MPMX26_02856 0.69 +0.2
2,947,024 + MPMX26_02856 0.86 -0.1
2,947,024 + MPMX26_02856 0.86 -0.1

Or see this region's nucleotide sequence