Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02796

Experiment: Ethanolamine (N)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_02794 and MPMX26_02795 are separated by 76 nucleotidesMPMX26_02795 and MPMX26_02796 are separated by 204 nucleotidesMPMX26_02796 and MPMX26_02797 are separated by 88 nucleotidesMPMX26_02797 and MPMX26_02798 are separated by 221 nucleotides MPMX26_02794: MPMX26_02794 - Guanylate kinase, at 2,878,052 to 2,878,675 _02794 MPMX26_02795: MPMX26_02795 - DNA-directed RNA polymerase subunit omega, at 2,878,752 to 2,879,033 _02795 MPMX26_02796: MPMX26_02796 - Bifunctional (p)ppGpp synthase/hydrolase SpoT, at 2,879,238 to 2,881,337 _02796 MPMX26_02797: MPMX26_02797 - 2-iminobutanoate/2-iminopropanoate deaminase, at 2,881,426 to 2,881,809 _02797 MPMX26_02798: MPMX26_02798 - Bacterioferritin-associated ferredoxin, at 2,882,031 to 2,882,225 _02798 Position (kb) 2879 2880 2881 2882Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1at 2878.707 kb on + strandat 2878.707 kb on + strandat 2878.707 kb on + strandat 2878.707 kb on + strandat 2878.707 kb on + strandat 2878.707 kb on + strandat 2878.707 kb on + strandat 2878.712 kb on + strandat 2878.720 kb on - strandat 2878.747 kb on + strandat 2878.747 kb on + strandat 2878.749 kb on + strandat 2878.749 kb on + strandat 2878.754 kb on - strandat 2878.776 kb on + strandat 2878.777 kb on + strandat 2878.777 kb on + strandat 2878.777 kb on + strandat 2878.777 kb on + strandat 2878.777 kb on + strandat 2878.777 kb on + strandat 2878.777 kb on + strandat 2878.777 kb on + strandat 2878.788 kb on + strand, within MPMX26_02795at 2878.788 kb on + strand, within MPMX26_02795at 2878.852 kb on + strand, within MPMX26_02795at 2878.852 kb on + strand, within MPMX26_02795at 2878.852 kb on + strand, within MPMX26_02795at 2878.864 kb on + strand, within MPMX26_02795at 2878.939 kb on + strand, within MPMX26_02795at 2878.939 kb on + strand, within MPMX26_02795at 2878.939 kb on + strand, within MPMX26_02795at 2878.969 kb on + strand, within MPMX26_02795at 2878.969 kb on + strand, within MPMX26_02795at 2878.969 kb on + strand, within MPMX26_02795at 2878.974 kb on + strand, within MPMX26_02795at 2878.975 kb on + strand, within MPMX26_02795at 2878.981 kb on + strand, within MPMX26_02795at 2879.023 kb on + strandat 2879.034 kb on + strandat 2879.034 kb on + strandat 2879.034 kb on + strandat 2879.035 kb on + strandat 2879.053 kb on + strandat 2879.059 kb on + strandat 2879.059 kb on + strandat 2879.059 kb on + strandat 2879.059 kb on + strandat 2879.059 kb on + strandat 2879.059 kb on + strandat 2880.662 kb on + strand, within MPMX26_02796at 2880.839 kb on + strand, within MPMX26_02796at 2880.855 kb on - strand, within MPMX26_02796at 2880.883 kb on + strand, within MPMX26_02796at 2880.883 kb on + strand, within MPMX26_02796at 2880.883 kb on + strand, within MPMX26_02796at 2880.883 kb on + strand, within MPMX26_02796at 2880.883 kb on + strand, within MPMX26_02796at 2880.883 kb on + strand, within MPMX26_02796at 2880.883 kb on + strand, within MPMX26_02796at 2880.904 kb on + strand, within MPMX26_02796at 2880.928 kb on + strand, within MPMX26_02796at 2880.928 kb on + strand, within MPMX26_02796at 2880.939 kb on + strand, within MPMX26_02796at 2880.939 kb on + strand, within MPMX26_02796at 2880.939 kb on + strand, within MPMX26_02796at 2880.939 kb on + strand, within MPMX26_02796at 2880.979 kb on + strand, within MPMX26_02796at 2881.072 kb on + strand, within MPMX26_02796at 2881.300 kb on + strandat 2881.332 kb on + strandat 2881.505 kb on + strand, within MPMX26_02797at 2881.528 kb on + strand, within MPMX26_02797at 2881.528 kb on + strand, within MPMX26_02797at 2881.528 kb on + strand, within MPMX26_02797at 2881.529 kb on + strand, within MPMX26_02797at 2881.529 kb on + strand, within MPMX26_02797at 2881.529 kb on + strand, within MPMX26_02797at 2881.536 kb on + strand, within MPMX26_02797at 2881.539 kb on + strand, within MPMX26_02797at 2881.544 kb on + strand, within MPMX26_02797at 2881.544 kb on + strand, within MPMX26_02797at 2881.544 kb on + strand, within MPMX26_02797at 2881.544 kb on + strand, within MPMX26_02797at 2881.544 kb on + strand, within MPMX26_02797at 2881.544 kb on + strand, within MPMX26_02797at 2881.544 kb on + strand, within MPMX26_02797at 2881.544 kb on + strand, within MPMX26_02797at 2881.544 kb on + strand, within MPMX26_02797at 2881.544 kb on + strand, within MPMX26_02797at 2881.544 kb on + strand, within MPMX26_02797at 2881.544 kb on + strand, within MPMX26_02797at 2881.554 kb on + strand, within MPMX26_02797at 2881.554 kb on + strand, within MPMX26_02797at 2881.554 kb on + strand, within MPMX26_02797at 2881.554 kb on + strand, within MPMX26_02797at 2881.568 kb on + strand, within MPMX26_02797at 2881.570 kb on + strand, within MPMX26_02797at 2881.596 kb on + strand, within MPMX26_02797at 2881.596 kb on + strand, within MPMX26_02797at 2881.608 kb on + strand, within MPMX26_02797at 2881.608 kb on + strand, within MPMX26_02797at 2881.631 kb on + strand, within MPMX26_02797at 2881.719 kb on + strand, within MPMX26_02797at 2881.719 kb on + strand, within MPMX26_02797at 2881.719 kb on + strand, within MPMX26_02797at 2881.719 kb on + strand, within MPMX26_02797at 2881.719 kb on + strand, within MPMX26_02797at 2881.719 kb on + strand, within MPMX26_02797at 2881.719 kb on + strand, within MPMX26_02797at 2881.719 kb on + strand, within MPMX26_02797at 2881.719 kb on + strand, within MPMX26_02797at 2881.719 kb on + strand, within MPMX26_02797at 2881.719 kb on + strand, within MPMX26_02797at 2881.719 kb on + strand, within MPMX26_02797at 2881.719 kb on + strand, within MPMX26_02797at 2881.719 kb on + strand, within MPMX26_02797at 2881.719 kb on + strand, within MPMX26_02797at 2881.719 kb on + strand, within MPMX26_02797at 2881.719 kb on + strand, within MPMX26_02797at 2881.719 kb on + strand, within MPMX26_02797at 2881.719 kb on + strand, within MPMX26_02797at 2881.719 kb on + strand, within MPMX26_02797at 2881.719 kb on + strand, within MPMX26_02797at 2881.719 kb on + strand, within MPMX26_02797at 2881.719 kb on + strand, within MPMX26_02797at 2881.719 kb on + strand, within MPMX26_02797at 2881.719 kb on + strand, within MPMX26_02797at 2881.719 kb on + strand, within MPMX26_02797at 2881.738 kb on + strand, within MPMX26_02797at 2881.738 kb on + strand, within MPMX26_02797at 2881.738 kb on + strand, within MPMX26_02797at 2881.738 kb on + strand, within MPMX26_02797at 2881.738 kb on + strand, within MPMX26_02797at 2881.738 kb on + strand, within MPMX26_02797at 2881.738 kb on + strand, within MPMX26_02797at 2881.738 kb on + strand, within MPMX26_02797at 2881.738 kb on + strand, within MPMX26_02797at 2881.738 kb on + strand, within MPMX26_02797at 2881.738 kb on + strand, within MPMX26_02797at 2881.753 kb on + strand, within MPMX26_02797at 2881.758 kb on + strand, within MPMX26_02797at 2881.758 kb on + strand, within MPMX26_02797at 2881.758 kb on + strand, within MPMX26_02797at 2881.758 kb on + strand, within MPMX26_02797at 2882.031 kb on + strandat 2882.152 kb on + strand, within MPMX26_02798at 2882.170 kb on + strand, within MPMX26_02798

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction Ethanolamine (N)
remove
2,878,707 + -4.9
2,878,707 + -3.7
2,878,707 + -2.0
2,878,707 + -5.2
2,878,707 + -5.8
2,878,707 + -5.1
2,878,707 + -4.9
2,878,712 + -5.2
2,878,720 - -0.8
2,878,747 + -5.2
2,878,747 + -5.2
2,878,749 + -4.4
2,878,749 + -5.1
2,878,754 - -3.9
2,878,776 + -5.0
2,878,777 + -5.2
2,878,777 + -4.8
2,878,777 + -4.1
2,878,777 + -5.5
2,878,777 + -4.9
2,878,777 + -5.5
2,878,777 + -4.1
2,878,777 + -5.2
2,878,788 + MPMX26_02795 0.13 -5.4
2,878,788 + MPMX26_02795 0.13 -5.0
2,878,852 + MPMX26_02795 0.35 -5.8
2,878,852 + MPMX26_02795 0.35 -5.5
2,878,852 + MPMX26_02795 0.35 -4.6
2,878,864 + MPMX26_02795 0.40 -5.8
2,878,939 + MPMX26_02795 0.66 +0.5
2,878,939 + MPMX26_02795 0.66 -0.4
2,878,939 + MPMX26_02795 0.66 -0.4
2,878,969 + MPMX26_02795 0.77 -3.5
2,878,969 + MPMX26_02795 0.77 -2.7
2,878,969 + MPMX26_02795 0.77 -1.9
2,878,974 + MPMX26_02795 0.79 -0.5
2,878,975 + MPMX26_02795 0.79 -2.4
2,878,981 + MPMX26_02795 0.81 -0.7
2,879,023 + +1.6
2,879,034 + -0.0
2,879,034 + -0.8
2,879,034 + -0.2
2,879,035 + -1.0
2,879,053 + -0.7
2,879,059 + -0.3
2,879,059 + +0.1
2,879,059 + -0.6
2,879,059 + -0.4
2,879,059 + -1.0
2,879,059 + -0.8
2,880,662 + MPMX26_02796 0.68 -2.8
2,880,839 + MPMX26_02796 0.76 -0.8
2,880,855 - MPMX26_02796 0.77 -0.0
2,880,883 + MPMX26_02796 0.78 -0.0
2,880,883 + MPMX26_02796 0.78 -1.3
2,880,883 + MPMX26_02796 0.78 -3.1
2,880,883 + MPMX26_02796 0.78 -2.2
2,880,883 + MPMX26_02796 0.78 -1.0
2,880,883 + MPMX26_02796 0.78 -2.5
2,880,883 + MPMX26_02796 0.78 -1.5
2,880,904 + MPMX26_02796 0.79 -1.6
2,880,928 + MPMX26_02796 0.80 -1.6
2,880,928 + MPMX26_02796 0.80 -1.0
2,880,939 + MPMX26_02796 0.81 -0.0
2,880,939 + MPMX26_02796 0.81 -0.0
2,880,939 + MPMX26_02796 0.81 -1.0
2,880,939 + MPMX26_02796 0.81 -1.5
2,880,979 + MPMX26_02796 0.83 -1.6
2,881,072 + MPMX26_02796 0.87 -2.7
2,881,300 + -0.1
2,881,332 + +1.1
2,881,505 + MPMX26_02797 0.21 -4.3
2,881,528 + MPMX26_02797 0.27 -3.2
2,881,528 + MPMX26_02797 0.27 -4.1
2,881,528 + MPMX26_02797 0.27 -4.2
2,881,529 + MPMX26_02797 0.27 -4.7
2,881,529 + MPMX26_02797 0.27 -3.3
2,881,529 + MPMX26_02797 0.27 -4.2
2,881,536 + MPMX26_02797 0.29 -2.8
2,881,539 + MPMX26_02797 0.29 -6.1
2,881,544 + MPMX26_02797 0.31 -4.1
2,881,544 + MPMX26_02797 0.31 -1.6
2,881,544 + MPMX26_02797 0.31 -3.1
2,881,544 + MPMX26_02797 0.31 -4.5
2,881,544 + MPMX26_02797 0.31 -4.2
2,881,544 + MPMX26_02797 0.31 -2.7
2,881,544 + MPMX26_02797 0.31 -5.3
2,881,544 + MPMX26_02797 0.31 -5.3
2,881,544 + MPMX26_02797 0.31 -4.3
2,881,544 + MPMX26_02797 0.31 -3.0
2,881,544 + MPMX26_02797 0.31 -4.7
2,881,544 + MPMX26_02797 0.31 -2.2
2,881,554 + MPMX26_02797 0.33 -3.9
2,881,554 + MPMX26_02797 0.33 -4.0
2,881,554 + MPMX26_02797 0.33 -5.7
2,881,554 + MPMX26_02797 0.33 -5.3
2,881,568 + MPMX26_02797 0.37 -4.4
2,881,570 + MPMX26_02797 0.38 -4.0
2,881,596 + MPMX26_02797 0.44 -3.8
2,881,596 + MPMX26_02797 0.44 -3.8
2,881,608 + MPMX26_02797 0.47 -3.1
2,881,608 + MPMX26_02797 0.47 -4.4
2,881,631 + MPMX26_02797 0.53 -2.6
2,881,719 + MPMX26_02797 0.76 -4.0
2,881,719 + MPMX26_02797 0.76 -5.0
2,881,719 + MPMX26_02797 0.76 -4.5
2,881,719 + MPMX26_02797 0.76 -4.3
2,881,719 + MPMX26_02797 0.76 -5.3
2,881,719 + MPMX26_02797 0.76 -3.6
2,881,719 + MPMX26_02797 0.76 -4.6
2,881,719 + MPMX26_02797 0.76 -1.9
2,881,719 + MPMX26_02797 0.76 -5.6
2,881,719 + MPMX26_02797 0.76 -4.5
2,881,719 + MPMX26_02797 0.76 -4.9
2,881,719 + MPMX26_02797 0.76 -6.0
2,881,719 + MPMX26_02797 0.76 -1.1
2,881,719 + MPMX26_02797 0.76 -5.0
2,881,719 + MPMX26_02797 0.76 -2.9
2,881,719 + MPMX26_02797 0.76 -3.4
2,881,719 + MPMX26_02797 0.76 -4.4
2,881,719 + MPMX26_02797 0.76 -5.3
2,881,719 + MPMX26_02797 0.76 -3.7
2,881,719 + MPMX26_02797 0.76 -4.9
2,881,719 + MPMX26_02797 0.76 -3.6
2,881,719 + MPMX26_02797 0.76 -5.1
2,881,719 + MPMX26_02797 0.76 -2.9
2,881,719 + MPMX26_02797 0.76 -3.2
2,881,719 + MPMX26_02797 0.76 -3.1
2,881,719 + MPMX26_02797 0.76 -4.5
2,881,738 + MPMX26_02797 0.81 -4.8
2,881,738 + MPMX26_02797 0.81 -4.7
2,881,738 + MPMX26_02797 0.81 -1.9
2,881,738 + MPMX26_02797 0.81 -5.0
2,881,738 + MPMX26_02797 0.81 -5.6
2,881,738 + MPMX26_02797 0.81 -4.4
2,881,738 + MPMX26_02797 0.81 -4.3
2,881,738 + MPMX26_02797 0.81 -4.3
2,881,738 + MPMX26_02797 0.81 -4.6
2,881,738 + MPMX26_02797 0.81 -4.1
2,881,738 + MPMX26_02797 0.81 -4.5
2,881,753 + MPMX26_02797 0.85 -3.6
2,881,758 + MPMX26_02797 0.86 -3.9
2,881,758 + MPMX26_02797 0.86 -4.0
2,881,758 + MPMX26_02797 0.86 -4.1
2,881,758 + MPMX26_02797 0.86 -5.9
2,882,031 + -1.0
2,882,152 + MPMX26_02798 0.62 -0.3
2,882,170 + MPMX26_02798 0.71 -0.0

Or see this region's nucleotide sequence