Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02795

Experiment: Ethanolamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02793 and MPMX26_02794 are separated by 133 nucleotidesMPMX26_02794 and MPMX26_02795 are separated by 76 nucleotidesMPMX26_02795 and MPMX26_02796 are separated by 204 nucleotides MPMX26_02793: MPMX26_02793 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, at 2,876,968 to 2,877,918 _02793 MPMX26_02794: MPMX26_02794 - Guanylate kinase, at 2,878,052 to 2,878,675 _02794 MPMX26_02795: MPMX26_02795 - DNA-directed RNA polymerase subunit omega, at 2,878,752 to 2,879,033 _02795 MPMX26_02796: MPMX26_02796 - Bifunctional (p)ppGpp synthase/hydrolase SpoT, at 2,879,238 to 2,881,337 _02796 Position (kb) 2878 2879 2880Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1at 2878.707 kb on + strandat 2878.707 kb on + strandat 2878.707 kb on + strandat 2878.707 kb on + strandat 2878.707 kb on + strandat 2878.707 kb on + strandat 2878.707 kb on + strandat 2878.712 kb on + strandat 2878.720 kb on - strandat 2878.747 kb on + strandat 2878.747 kb on + strandat 2878.749 kb on + strandat 2878.749 kb on + strandat 2878.754 kb on - strandat 2878.776 kb on + strandat 2878.777 kb on + strandat 2878.777 kb on + strandat 2878.777 kb on + strandat 2878.777 kb on + strandat 2878.777 kb on + strandat 2878.777 kb on + strandat 2878.777 kb on + strandat 2878.777 kb on + strandat 2878.788 kb on + strand, within MPMX26_02795at 2878.788 kb on + strand, within MPMX26_02795at 2878.852 kb on + strand, within MPMX26_02795at 2878.852 kb on + strand, within MPMX26_02795at 2878.852 kb on + strand, within MPMX26_02795at 2878.864 kb on + strand, within MPMX26_02795at 2878.939 kb on + strand, within MPMX26_02795at 2878.939 kb on + strand, within MPMX26_02795at 2878.939 kb on + strand, within MPMX26_02795at 2878.969 kb on + strand, within MPMX26_02795at 2878.969 kb on + strand, within MPMX26_02795at 2878.969 kb on + strand, within MPMX26_02795at 2878.974 kb on + strand, within MPMX26_02795at 2878.975 kb on + strand, within MPMX26_02795at 2878.981 kb on + strand, within MPMX26_02795at 2879.023 kb on + strandat 2879.034 kb on + strandat 2879.034 kb on + strandat 2879.034 kb on + strandat 2879.035 kb on + strandat 2879.053 kb on + strandat 2879.059 kb on + strandat 2879.059 kb on + strandat 2879.059 kb on + strandat 2879.059 kb on + strandat 2879.059 kb on + strandat 2879.059 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Ethanolamine (N)
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2,878,707 + -4.9
2,878,707 + -3.7
2,878,707 + -2.0
2,878,707 + -5.2
2,878,707 + -5.8
2,878,707 + -5.1
2,878,707 + -4.9
2,878,712 + -5.2
2,878,720 - -0.8
2,878,747 + -5.2
2,878,747 + -5.2
2,878,749 + -4.4
2,878,749 + -5.1
2,878,754 - -3.9
2,878,776 + -5.0
2,878,777 + -5.2
2,878,777 + -4.8
2,878,777 + -4.1
2,878,777 + -5.5
2,878,777 + -4.9
2,878,777 + -5.5
2,878,777 + -4.1
2,878,777 + -5.2
2,878,788 + MPMX26_02795 0.13 -5.4
2,878,788 + MPMX26_02795 0.13 -5.0
2,878,852 + MPMX26_02795 0.35 -5.8
2,878,852 + MPMX26_02795 0.35 -5.5
2,878,852 + MPMX26_02795 0.35 -4.6
2,878,864 + MPMX26_02795 0.40 -5.8
2,878,939 + MPMX26_02795 0.66 +0.5
2,878,939 + MPMX26_02795 0.66 -0.4
2,878,939 + MPMX26_02795 0.66 -0.4
2,878,969 + MPMX26_02795 0.77 -3.5
2,878,969 + MPMX26_02795 0.77 -2.7
2,878,969 + MPMX26_02795 0.77 -1.9
2,878,974 + MPMX26_02795 0.79 -0.5
2,878,975 + MPMX26_02795 0.79 -2.4
2,878,981 + MPMX26_02795 0.81 -0.7
2,879,023 + +1.6
2,879,034 + -0.0
2,879,034 + -0.8
2,879,034 + -0.2
2,879,035 + -1.0
2,879,053 + -0.7
2,879,059 + -0.3
2,879,059 + +0.1
2,879,059 + -0.6
2,879,059 + -0.4
2,879,059 + -1.0
2,879,059 + -0.8

Or see this region's nucleotide sequence