Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02688

Experiment: Ethanolamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02685 and MPMX26_02686 are separated by 36 nucleotidesMPMX26_02686 and MPMX26_02687 are separated by 9 nucleotidesMPMX26_02687 and MPMX26_02688 are separated by 66 nucleotidesMPMX26_02688 and MPMX26_02689 are separated by 158 nucleotidesMPMX26_02689 and MPMX26_02690 are separated by 77 nucleotides MPMX26_02685: MPMX26_02685 - Oligopeptidase A, at 2,778,925 to 2,780,964 _02685 MPMX26_02686: MPMX26_02686 - hypothetical protein, at 2,781,001 to 2,781,216 _02686 MPMX26_02687: MPMX26_02687 - hypothetical protein, at 2,781,226 to 2,781,657 _02687 MPMX26_02688: MPMX26_02688 - hypothetical protein, at 2,781,724 to 2,784,003 _02688 MPMX26_02689: MPMX26_02689 - hypothetical protein, at 2,784,162 to 2,784,755 _02689 MPMX26_02690: MPMX26_02690 - hypothetical protein, at 2,784,833 to 2,785,948 _02690 Position (kb) 2781 2782 2783 2784 2785Strain fitness (log2 ratio) -2 -1 0 1 2at 2780.820 kb on + strandat 2780.826 kb on + strandat 2780.839 kb on + strandat 2780.839 kb on + strandat 2780.862 kb on + strandat 2780.862 kb on + strandat 2780.892 kb on + strandat 2780.928 kb on + strandat 2780.934 kb on + strandat 2780.934 kb on + strandat 2780.934 kb on + strandat 2780.939 kb on + strandat 2780.939 kb on + strandat 2780.944 kb on + strandat 2780.949 kb on + strandat 2780.949 kb on + strandat 2780.949 kb on + strandat 2780.949 kb on + strandat 2780.949 kb on + strandat 2780.949 kb on + strandat 2780.949 kb on + strandat 2780.949 kb on + strandat 2780.949 kb on + strandat 2780.949 kb on + strandat 2780.949 kb on + strandat 2780.949 kb on + strandat 2780.949 kb on + strandat 2780.984 kb on + strandat 2781.028 kb on + strand, within MPMX26_02686at 2781.028 kb on + strand, within MPMX26_02686at 2781.028 kb on + strand, within MPMX26_02686at 2781.057 kb on + strand, within MPMX26_02686at 2781.129 kb on + strand, within MPMX26_02686at 2781.139 kb on + strand, within MPMX26_02686at 2781.139 kb on + strand, within MPMX26_02686at 2781.181 kb on + strand, within MPMX26_02686at 2781.182 kb on + strand, within MPMX26_02686at 2781.182 kb on + strand, within MPMX26_02686at 2781.192 kb on + strand, within MPMX26_02686at 2781.192 kb on + strand, within MPMX26_02686at 2781.228 kb on + strandat 2781.228 kb on + strandat 2781.228 kb on + strandat 2781.312 kb on + strand, within MPMX26_02687at 2781.312 kb on + strand, within MPMX26_02687at 2781.312 kb on + strand, within MPMX26_02687at 2781.336 kb on + strand, within MPMX26_02687at 2781.336 kb on + strand, within MPMX26_02687at 2781.336 kb on + strand, within MPMX26_02687at 2781.346 kb on + strand, within MPMX26_02687at 2781.401 kb on + strand, within MPMX26_02687at 2781.401 kb on + strand, within MPMX26_02687at 2781.401 kb on + strand, within MPMX26_02687at 2781.401 kb on + strand, within MPMX26_02687at 2781.411 kb on + strand, within MPMX26_02687at 2781.411 kb on + strand, within MPMX26_02687at 2781.411 kb on + strand, within MPMX26_02687at 2781.442 kb on + strand, within MPMX26_02687at 2781.483 kb on + strand, within MPMX26_02687at 2781.485 kb on + strand, within MPMX26_02687at 2781.490 kb on + strand, within MPMX26_02687at 2781.526 kb on + strand, within MPMX26_02687at 2781.568 kb on + strand, within MPMX26_02687at 2781.568 kb on + strand, within MPMX26_02687at 2781.568 kb on + strand, within MPMX26_02687at 2781.568 kb on + strand, within MPMX26_02687at 2781.597 kb on + strand, within MPMX26_02687at 2781.597 kb on + strand, within MPMX26_02687at 2781.604 kb on + strand, within MPMX26_02687at 2781.659 kb on + strandat 2781.937 kb on - strandat 2781.937 kb on - strandat 2782.017 kb on - strand, within MPMX26_02688at 2782.111 kb on - strand, within MPMX26_02688at 2782.144 kb on - strand, within MPMX26_02688at 2784.271 kb on - strand, within MPMX26_02689at 2784.808 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Ethanolamine (N)
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2,780,820 + +0.9
2,780,826 + +0.2
2,780,839 + -0.1
2,780,839 + +0.4
2,780,862 + +0.9
2,780,862 + +0.9
2,780,892 + +0.1
2,780,928 + +0.2
2,780,934 + +0.5
2,780,934 + -0.1
2,780,934 + +0.7
2,780,939 + +2.3
2,780,939 + +0.2
2,780,944 + +0.8
2,780,949 + +0.2
2,780,949 + +0.9
2,780,949 + +0.1
2,780,949 + +1.5
2,780,949 + +0.2
2,780,949 + +0.4
2,780,949 + +0.8
2,780,949 + +1.4
2,780,949 + +0.6
2,780,949 + -0.1
2,780,949 + +0.2
2,780,949 + +0.9
2,780,949 + +0.2
2,780,984 + +1.6
2,781,028 + MPMX26_02686 0.12 +0.8
2,781,028 + MPMX26_02686 0.12 +0.9
2,781,028 + MPMX26_02686 0.12 +0.6
2,781,057 + MPMX26_02686 0.26 +0.3
2,781,129 + MPMX26_02686 0.59 -0.4
2,781,139 + MPMX26_02686 0.64 -0.4
2,781,139 + MPMX26_02686 0.64 -0.4
2,781,181 + MPMX26_02686 0.83 +1.1
2,781,182 + MPMX26_02686 0.84 -0.4
2,781,182 + MPMX26_02686 0.84 -0.7
2,781,192 + MPMX26_02686 0.88 +0.0
2,781,192 + MPMX26_02686 0.88 +1.0
2,781,228 + +0.1
2,781,228 + +0.0
2,781,228 + +0.6
2,781,312 + MPMX26_02687 0.20 -0.9
2,781,312 + MPMX26_02687 0.20 +1.1
2,781,312 + MPMX26_02687 0.20 +0.7
2,781,336 + MPMX26_02687 0.25 +0.0
2,781,336 + MPMX26_02687 0.25 -1.3
2,781,336 + MPMX26_02687 0.25 -0.1
2,781,346 + MPMX26_02687 0.28 +1.1
2,781,401 + MPMX26_02687 0.41 -2.7
2,781,401 + MPMX26_02687 0.41 +0.0
2,781,401 + MPMX26_02687 0.41 -1.2
2,781,401 + MPMX26_02687 0.41 -1.3
2,781,411 + MPMX26_02687 0.43 -0.2
2,781,411 + MPMX26_02687 0.43 +0.1
2,781,411 + MPMX26_02687 0.43 +0.5
2,781,442 + MPMX26_02687 0.50 +0.2
2,781,483 + MPMX26_02687 0.59 +0.1
2,781,485 + MPMX26_02687 0.60 -0.3
2,781,490 + MPMX26_02687 0.61 +0.2
2,781,526 + MPMX26_02687 0.69 +0.4
2,781,568 + MPMX26_02687 0.79 +0.5
2,781,568 + MPMX26_02687 0.79 -1.0
2,781,568 + MPMX26_02687 0.79 +0.7
2,781,568 + MPMX26_02687 0.79 +0.7
2,781,597 + MPMX26_02687 0.86 -0.8
2,781,597 + MPMX26_02687 0.86 +0.0
2,781,604 + MPMX26_02687 0.88 -0.1
2,781,659 + -0.3
2,781,937 - +1.0
2,781,937 - -1.6
2,782,017 - MPMX26_02688 0.13 +0.6
2,782,111 - MPMX26_02688 0.17 +0.4
2,782,144 - MPMX26_02688 0.18 +0.8
2,784,271 - MPMX26_02689 0.18 -1.6
2,784,808 + -0.1

Or see this region's nucleotide sequence