Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02620

Experiment: Ethanolamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02619 and MPMX26_02620 are separated by 99 nucleotidesMPMX26_02620 and MPMX26_02621 are separated by 44 nucleotidesMPMX26_02621 and MPMX26_02622 are separated by 9 nucleotides MPMX26_02619: MPMX26_02619 - Vitamin B12 transporter BtuB, at 2,713,520 to 2,715,337 _02619 MPMX26_02620: MPMX26_02620 - Cobalamin adenosyltransferase, at 2,715,437 to 2,716,015 _02620 MPMX26_02621: MPMX26_02621 - Glycerophosphodiester phosphodiesterase, cytoplasmic, at 2,716,060 to 2,716,773 _02621 MPMX26_02622: MPMX26_02622 - hypothetical protein, at 2,716,783 to 2,717,316 _02622 Position (kb) 2715 2716 2717Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 2714.456 kb on + strand, within MPMX26_02619at 2714.491 kb on + strand, within MPMX26_02619at 2714.491 kb on + strand, within MPMX26_02619at 2714.493 kb on + strand, within MPMX26_02619at 2714.493 kb on + strand, within MPMX26_02619at 2714.493 kb on + strand, within MPMX26_02619at 2714.493 kb on + strand, within MPMX26_02619at 2714.493 kb on + strand, within MPMX26_02619at 2714.493 kb on + strand, within MPMX26_02619at 2714.501 kb on + strand, within MPMX26_02619at 2714.501 kb on + strand, within MPMX26_02619at 2714.516 kb on + strand, within MPMX26_02619at 2714.567 kb on + strand, within MPMX26_02619at 2714.569 kb on + strand, within MPMX26_02619at 2714.600 kb on + strand, within MPMX26_02619at 2714.607 kb on + strand, within MPMX26_02619at 2714.658 kb on + strand, within MPMX26_02619at 2714.658 kb on + strand, within MPMX26_02619at 2714.663 kb on + strand, within MPMX26_02619at 2714.670 kb on + strand, within MPMX26_02619at 2714.687 kb on + strand, within MPMX26_02619at 2714.693 kb on + strand, within MPMX26_02619at 2714.695 kb on + strand, within MPMX26_02619at 2714.697 kb on + strand, within MPMX26_02619at 2714.736 kb on + strand, within MPMX26_02619at 2714.736 kb on + strand, within MPMX26_02619at 2714.752 kb on + strand, within MPMX26_02619at 2714.752 kb on + strand, within MPMX26_02619at 2714.814 kb on + strand, within MPMX26_02619at 2714.862 kb on + strand, within MPMX26_02619at 2714.862 kb on + strand, within MPMX26_02619at 2714.862 kb on + strand, within MPMX26_02619at 2714.943 kb on + strand, within MPMX26_02619at 2714.943 kb on + strand, within MPMX26_02619at 2714.943 kb on + strand, within MPMX26_02619at 2714.950 kb on + strand, within MPMX26_02619at 2714.969 kb on + strand, within MPMX26_02619at 2715.035 kb on + strand, within MPMX26_02619at 2715.077 kb on + strand, within MPMX26_02619at 2715.077 kb on + strand, within MPMX26_02619at 2715.077 kb on + strand, within MPMX26_02619at 2715.091 kb on + strand, within MPMX26_02619at 2715.091 kb on + strand, within MPMX26_02619at 2715.091 kb on + strand, within MPMX26_02619at 2715.092 kb on + strand, within MPMX26_02619at 2715.092 kb on + strand, within MPMX26_02619at 2715.128 kb on + strand, within MPMX26_02619at 2715.177 kb on + strandat 2715.266 kb on + strandat 2715.266 kb on + strandat 2715.266 kb on + strandat 2715.266 kb on + strandat 2715.266 kb on + strandat 2715.266 kb on + strandat 2715.266 kb on + strandat 2715.266 kb on + strandat 2715.266 kb on + strandat 2715.266 kb on + strandat 2715.268 kb on + strandat 2715.268 kb on + strandat 2715.318 kb on + strandat 2715.318 kb on + strandat 2715.318 kb on + strandat 2715.387 kb on + strandat 2715.486 kb on + strandat 2715.529 kb on + strand, within MPMX26_02620at 2715.529 kb on + strand, within MPMX26_02620at 2715.538 kb on + strand, within MPMX26_02620at 2715.539 kb on + strand, within MPMX26_02620at 2715.568 kb on + strand, within MPMX26_02620at 2715.569 kb on + strand, within MPMX26_02620at 2715.601 kb on + strand, within MPMX26_02620at 2715.647 kb on + strand, within MPMX26_02620at 2715.703 kb on + strand, within MPMX26_02620at 2715.703 kb on + strand, within MPMX26_02620at 2715.703 kb on + strand, within MPMX26_02620at 2715.703 kb on + strand, within MPMX26_02620at 2715.748 kb on + strand, within MPMX26_02620at 2715.752 kb on + strand, within MPMX26_02620at 2715.758 kb on + strand, within MPMX26_02620at 2715.798 kb on + strand, within MPMX26_02620at 2715.818 kb on + strand, within MPMX26_02620at 2715.818 kb on + strand, within MPMX26_02620at 2715.866 kb on + strand, within MPMX26_02620at 2715.866 kb on + strand, within MPMX26_02620at 2715.866 kb on + strand, within MPMX26_02620at 2715.873 kb on + strand, within MPMX26_02620at 2715.873 kb on + strand, within MPMX26_02620at 2715.873 kb on + strand, within MPMX26_02620at 2715.908 kb on + strand, within MPMX26_02620at 2715.908 kb on + strand, within MPMX26_02620at 2715.960 kb on + strandat 2715.961 kb on + strandat 2715.961 kb on + strandat 2715.967 kb on + strandat 2715.973 kb on + strandat 2716.079 kb on + strandat 2716.136 kb on + strand, within MPMX26_02621at 2716.143 kb on + strand, within MPMX26_02621at 2716.153 kb on + strand, within MPMX26_02621at 2716.163 kb on + strand, within MPMX26_02621at 2716.165 kb on + strand, within MPMX26_02621at 2716.173 kb on + strand, within MPMX26_02621at 2716.187 kb on + strand, within MPMX26_02621at 2716.228 kb on + strand, within MPMX26_02621at 2716.245 kb on + strand, within MPMX26_02621at 2716.274 kb on + strand, within MPMX26_02621at 2716.379 kb on + strand, within MPMX26_02621at 2716.389 kb on + strand, within MPMX26_02621at 2716.422 kb on + strand, within MPMX26_02621at 2716.427 kb on + strand, within MPMX26_02621at 2716.432 kb on + strand, within MPMX26_02621at 2716.438 kb on + strand, within MPMX26_02621at 2716.440 kb on + strand, within MPMX26_02621at 2716.440 kb on + strand, within MPMX26_02621at 2716.440 kb on + strand, within MPMX26_02621at 2716.440 kb on + strand, within MPMX26_02621at 2716.448 kb on + strand, within MPMX26_02621at 2716.465 kb on + strand, within MPMX26_02621at 2716.465 kb on + strand, within MPMX26_02621at 2716.470 kb on + strand, within MPMX26_02621at 2716.489 kb on + strand, within MPMX26_02621at 2716.489 kb on + strand, within MPMX26_02621at 2716.489 kb on + strand, within MPMX26_02621at 2716.539 kb on + strand, within MPMX26_02621at 2716.552 kb on + strand, within MPMX26_02621at 2716.557 kb on + strand, within MPMX26_02621at 2716.582 kb on + strand, within MPMX26_02621at 2716.582 kb on + strand, within MPMX26_02621at 2716.627 kb on + strand, within MPMX26_02621at 2716.648 kb on + strand, within MPMX26_02621at 2716.671 kb on + strand, within MPMX26_02621at 2716.688 kb on + strand, within MPMX26_02621at 2716.688 kb on + strand, within MPMX26_02621at 2716.698 kb on + strand, within MPMX26_02621at 2716.705 kb on + strandat 2716.705 kb on + strandat 2716.710 kb on + strandat 2716.721 kb on + strandat 2716.723 kb on + strandat 2716.723 kb on + strandat 2716.746 kb on + strandat 2716.746 kb on + strandat 2716.746 kb on + strandat 2716.761 kb on - strandat 2716.804 kb on - strandat 2716.815 kb on - strandat 2716.825 kb on - strandat 2716.890 kb on - strand, within MPMX26_02622at 2716.907 kb on - strand, within MPMX26_02622at 2716.909 kb on - strand, within MPMX26_02622at 2716.913 kb on - strand, within MPMX26_02622at 2716.962 kb on - strand, within MPMX26_02622at 2716.972 kb on - strand, within MPMX26_02622at 2716.972 kb on - strand, within MPMX26_02622at 2716.972 kb on - strand, within MPMX26_02622at 2716.989 kb on - strand, within MPMX26_02622at 2716.999 kb on - strand, within MPMX26_02622at 2716.999 kb on - strand, within MPMX26_02622at 2716.999 kb on - strand, within MPMX26_02622at 2716.999 kb on - strand, within MPMX26_02622at 2716.999 kb on - strand, within MPMX26_02622at 2716.999 kb on - strand, within MPMX26_02622at 2716.999 kb on - strand, within MPMX26_02622at 2716.999 kb on - strand, within MPMX26_02622at 2716.999 kb on - strand, within MPMX26_02622at 2716.999 kb on - strand, within MPMX26_02622at 2716.999 kb on - strand, within MPMX26_02622at 2716.999 kb on - strand, within MPMX26_02622at 2716.999 kb on - strand, within MPMX26_02622at 2717.001 kb on - strand, within MPMX26_02622at 2717.001 kb on - strand, within MPMX26_02622at 2717.001 kb on - strand, within MPMX26_02622

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Per-strain Table

Position Strand Gene LocusTag Fraction Ethanolamine (N)
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2,714,456 + MPMX26_02619 0.51 -4.3
2,714,491 + MPMX26_02619 0.53 -2.9
2,714,491 + MPMX26_02619 0.53 -2.2
2,714,493 + MPMX26_02619 0.54 -3.0
2,714,493 + MPMX26_02619 0.54 -4.1
2,714,493 + MPMX26_02619 0.54 -4.6
2,714,493 + MPMX26_02619 0.54 -5.6
2,714,493 + MPMX26_02619 0.54 -3.5
2,714,493 + MPMX26_02619 0.54 -3.4
2,714,501 + MPMX26_02619 0.54 -2.3
2,714,501 + MPMX26_02619 0.54 -2.7
2,714,516 + MPMX26_02619 0.55 -2.9
2,714,567 + MPMX26_02619 0.58 -3.5
2,714,569 + MPMX26_02619 0.58 -3.5
2,714,600 + MPMX26_02619 0.59 -3.0
2,714,607 + MPMX26_02619 0.60 -3.2
2,714,658 + MPMX26_02619 0.63 -4.8
2,714,658 + MPMX26_02619 0.63 -3.5
2,714,663 + MPMX26_02619 0.63 -2.9
2,714,670 + MPMX26_02619 0.63 -3.5
2,714,687 + MPMX26_02619 0.64 -3.1
2,714,693 + MPMX26_02619 0.65 -3.3
2,714,695 + MPMX26_02619 0.65 -3.4
2,714,697 + MPMX26_02619 0.65 -2.8
2,714,736 + MPMX26_02619 0.67 -4.1
2,714,736 + MPMX26_02619 0.67 -2.6
2,714,752 + MPMX26_02619 0.68 -2.4
2,714,752 + MPMX26_02619 0.68 -2.6
2,714,814 + MPMX26_02619 0.71 -3.5
2,714,862 + MPMX26_02619 0.74 -4.4
2,714,862 + MPMX26_02619 0.74 -2.9
2,714,862 + MPMX26_02619 0.74 -3.0
2,714,943 + MPMX26_02619 0.78 -5.3
2,714,943 + MPMX26_02619 0.78 -4.3
2,714,943 + MPMX26_02619 0.78 -2.9
2,714,950 + MPMX26_02619 0.79 -4.1
2,714,969 + MPMX26_02619 0.80 -2.7
2,715,035 + MPMX26_02619 0.83 -2.2
2,715,077 + MPMX26_02619 0.86 -2.5
2,715,077 + MPMX26_02619 0.86 -3.2
2,715,077 + MPMX26_02619 0.86 -2.4
2,715,091 + MPMX26_02619 0.86 -1.5
2,715,091 + MPMX26_02619 0.86 -3.6
2,715,091 + MPMX26_02619 0.86 -4.7
2,715,092 + MPMX26_02619 0.86 -1.4
2,715,092 + MPMX26_02619 0.86 -2.9
2,715,128 + MPMX26_02619 0.88 -3.6
2,715,177 + -4.0
2,715,266 + -3.2
2,715,266 + -1.7
2,715,266 + -1.4
2,715,266 + -3.0
2,715,266 + -1.6
2,715,266 + -2.1
2,715,266 + -1.8
2,715,266 + -4.4
2,715,266 + -2.9
2,715,266 + -2.8
2,715,268 + -2.7
2,715,268 + -3.3
2,715,318 + -3.4
2,715,318 + -1.6
2,715,318 + -1.9
2,715,387 + +0.3
2,715,486 + -2.7
2,715,529 + MPMX26_02620 0.16 -1.4
2,715,529 + MPMX26_02620 0.16 -2.4
2,715,538 + MPMX26_02620 0.17 -2.7
2,715,539 + MPMX26_02620 0.18 -1.0
2,715,568 + MPMX26_02620 0.23 -5.3
2,715,569 + MPMX26_02620 0.23 -3.9
2,715,601 + MPMX26_02620 0.28 -4.0
2,715,647 + MPMX26_02620 0.36 -4.0
2,715,703 + MPMX26_02620 0.46 -3.3
2,715,703 + MPMX26_02620 0.46 -3.2
2,715,703 + MPMX26_02620 0.46 -2.5
2,715,703 + MPMX26_02620 0.46 -2.8
2,715,748 + MPMX26_02620 0.54 -1.0
2,715,752 + MPMX26_02620 0.54 -2.8
2,715,758 + MPMX26_02620 0.55 -3.7
2,715,798 + MPMX26_02620 0.62 -0.8
2,715,818 + MPMX26_02620 0.66 -2.6
2,715,818 + MPMX26_02620 0.66 -3.1
2,715,866 + MPMX26_02620 0.74 -1.6
2,715,866 + MPMX26_02620 0.74 -2.6
2,715,866 + MPMX26_02620 0.74 -3.4
2,715,873 + MPMX26_02620 0.75 -2.8
2,715,873 + MPMX26_02620 0.75 -3.2
2,715,873 + MPMX26_02620 0.75 +0.3
2,715,908 + MPMX26_02620 0.81 -2.0
2,715,908 + MPMX26_02620 0.81 -3.7
2,715,960 + -1.4
2,715,961 + -3.1
2,715,961 + -4.1
2,715,967 + -2.3
2,715,973 + -2.7
2,716,079 + -1.2
2,716,136 + MPMX26_02621 0.11 +0.3
2,716,143 + MPMX26_02621 0.12 +0.1
2,716,153 + MPMX26_02621 0.13 -0.1
2,716,163 + MPMX26_02621 0.14 +0.6
2,716,165 + MPMX26_02621 0.15 +1.0
2,716,173 + MPMX26_02621 0.16 -0.9
2,716,187 + MPMX26_02621 0.18 -0.7
2,716,228 + MPMX26_02621 0.24 -0.6
2,716,245 + MPMX26_02621 0.26 -0.1
2,716,274 + MPMX26_02621 0.30 -0.8
2,716,379 + MPMX26_02621 0.45 +0.9
2,716,389 + MPMX26_02621 0.46 -0.2
2,716,422 + MPMX26_02621 0.51 -1.0
2,716,427 + MPMX26_02621 0.51 +0.4
2,716,432 + MPMX26_02621 0.52 +0.9
2,716,438 + MPMX26_02621 0.53 -0.3
2,716,440 + MPMX26_02621 0.53 +0.4
2,716,440 + MPMX26_02621 0.53 -1.0
2,716,440 + MPMX26_02621 0.53 +0.5
2,716,440 + MPMX26_02621 0.53 -0.2
2,716,448 + MPMX26_02621 0.54 -0.6
2,716,465 + MPMX26_02621 0.57 +0.1
2,716,465 + MPMX26_02621 0.57 +1.0
2,716,470 + MPMX26_02621 0.57 +0.4
2,716,489 + MPMX26_02621 0.60 -0.2
2,716,489 + MPMX26_02621 0.60 +0.5
2,716,489 + MPMX26_02621 0.60 +0.5
2,716,539 + MPMX26_02621 0.67 -0.2
2,716,552 + MPMX26_02621 0.69 -0.3
2,716,557 + MPMX26_02621 0.70 +0.1
2,716,582 + MPMX26_02621 0.73 +0.1
2,716,582 + MPMX26_02621 0.73 +0.3
2,716,627 + MPMX26_02621 0.79 +0.2
2,716,648 + MPMX26_02621 0.82 +0.1
2,716,671 + MPMX26_02621 0.86 +0.6
2,716,688 + MPMX26_02621 0.88 -0.9
2,716,688 + MPMX26_02621 0.88 +0.4
2,716,698 + MPMX26_02621 0.89 +0.7
2,716,705 + +1.2
2,716,705 + +0.6
2,716,710 + +0.5
2,716,721 + +0.8
2,716,723 + +0.3
2,716,723 + +0.1
2,716,746 + +0.6
2,716,746 + +0.5
2,716,746 + +0.7
2,716,761 - +0.3
2,716,804 - -0.6
2,716,815 - +0.4
2,716,825 - +0.7
2,716,890 - MPMX26_02622 0.20 +0.7
2,716,907 - MPMX26_02622 0.23 +0.9
2,716,909 - MPMX26_02622 0.24 +0.6
2,716,913 - MPMX26_02622 0.24 +0.9
2,716,962 - MPMX26_02622 0.34 -1.1
2,716,972 - MPMX26_02622 0.35 +0.8
2,716,972 - MPMX26_02622 0.35 -0.1
2,716,972 - MPMX26_02622 0.35 +0.8
2,716,989 - MPMX26_02622 0.39 -1.2
2,716,999 - MPMX26_02622 0.40 -1.5
2,716,999 - MPMX26_02622 0.40 -0.7
2,716,999 - MPMX26_02622 0.40 -1.0
2,716,999 - MPMX26_02622 0.40 -0.0
2,716,999 - MPMX26_02622 0.40 +1.4
2,716,999 - MPMX26_02622 0.40 -0.4
2,716,999 - MPMX26_02622 0.40 -0.3
2,716,999 - MPMX26_02622 0.40 -1.5
2,716,999 - MPMX26_02622 0.40 -0.3
2,716,999 - MPMX26_02622 0.40 -0.5
2,716,999 - MPMX26_02622 0.40 -0.8
2,716,999 - MPMX26_02622 0.40 +1.7
2,716,999 - MPMX26_02622 0.40 +0.6
2,717,001 - MPMX26_02622 0.41 -0.2
2,717,001 - MPMX26_02622 0.41 -0.6
2,717,001 - MPMX26_02622 0.41 +0.2

Or see this region's nucleotide sequence