Experiment: Ethanolamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02560 and MPMX26_02561 are separated by 100 nucleotides MPMX26_02561 and MPMX26_02562 are separated by 139 nucleotides MPMX26_02562 and MPMX26_02563 are separated by 298 nucleotides
MPMX26_02560: MPMX26_02560 - hypothetical protein, at 2,650,518 to 2,653,346
_02560
MPMX26_02561: MPMX26_02561 - hypothetical protein, at 2,653,447 to 2,653,575
_02561
MPMX26_02562: MPMX26_02562 - Ribonucleoside-diphosphate reductase subunit beta, at 2,653,715 to 2,654,998
_02562
MPMX26_02563: MPMX26_02563 - HTH-type transcriptional regulator BenM, at 2,655,297 to 2,656,214
_02563
Position (kb)
2653
2654
2655 Strain fitness (log2 ratio)
-2
-1
0
1 at 2653.354 kb on + strand at 2653.354 kb on + strand at 2653.354 kb on + strand at 2653.354 kb on + strand at 2653.354 kb on + strand at 2653.354 kb on + strand at 2653.354 kb on + strand at 2653.354 kb on + strand at 2653.354 kb on + strand at 2653.354 kb on + strand at 2653.361 kb on + strand at 2653.453 kb on + strand at 2653.459 kb on + strand at 2653.459 kb on + strand at 2653.525 kb on + strand, within MPMX26_02561 at 2653.525 kb on + strand, within MPMX26_02561 at 2653.525 kb on + strand, within MPMX26_02561 at 2653.525 kb on + strand, within MPMX26_02561 at 2653.525 kb on + strand, within MPMX26_02561 at 2653.525 kb on + strand, within MPMX26_02561 at 2653.525 kb on + strand, within MPMX26_02561 at 2653.552 kb on + strand, within MPMX26_02561 at 2653.576 kb on + strand at 2653.636 kb on + strand at 2653.648 kb on + strand at 2653.650 kb on + strand at 2653.688 kb on + strand at 2654.994 kb on + strand at 2654.994 kb on + strand at 2655.042 kb on + strand at 2655.061 kb on + strand at 2655.069 kb on + strand at 2655.076 kb on + strand at 2655.527 kb on - strand, within MPMX26_02563 at 2655.621 kb on - strand, within MPMX26_02563 at 2655.621 kb on - strand, within MPMX26_02563 at 2655.716 kb on - strand, within MPMX26_02563 at 2655.716 kb on - strand, within MPMX26_02563 at 2655.950 kb on - strand, within MPMX26_02563
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanolamine (N) remove 2,653,354 + +0.2 2,653,354 + +0.0 2,653,354 + -0.0 2,653,354 + +1.0 2,653,354 + +1.0 2,653,354 + +0.8 2,653,354 + +0.3 2,653,354 + +0.3 2,653,354 + +0.3 2,653,354 + +0.1 2,653,361 + +0.7 2,653,453 + +0.7 2,653,459 + +1.0 2,653,459 + +0.3 2,653,525 + MPMX26_02561 0.60 +0.8 2,653,525 + MPMX26_02561 0.60 +0.9 2,653,525 + MPMX26_02561 0.60 +0.5 2,653,525 + MPMX26_02561 0.60 +0.2 2,653,525 + MPMX26_02561 0.60 +0.8 2,653,525 + MPMX26_02561 0.60 +0.1 2,653,525 + MPMX26_02561 0.60 -0.0 2,653,552 + MPMX26_02561 0.81 +0.6 2,653,576 + +0.5 2,653,636 + +1.5 2,653,648 + -1.4 2,653,650 + +1.3 2,653,688 + -2.0 2,654,994 + +0.0 2,654,994 + -0.3 2,655,042 + +0.2 2,655,061 + +0.4 2,655,069 + +0.2 2,655,076 + -0.1 2,655,527 - MPMX26_02563 0.25 -1.3 2,655,621 - MPMX26_02563 0.35 -0.2 2,655,621 - MPMX26_02563 0.35 -1.1 2,655,716 - MPMX26_02563 0.46 -0.4 2,655,716 - MPMX26_02563 0.46 -0.0 2,655,950 - MPMX26_02563 0.71 +1.1
Or see this region's nucleotide sequence