Experiment: Ethanolamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02559 and MPMX26_02560 are separated by 597 nucleotides MPMX26_02560 and MPMX26_02561 are separated by 100 nucleotides MPMX26_02561 and MPMX26_02562 are separated by 139 nucleotides
MPMX26_02559: MPMX26_02559 - Transcriptional regulatory protein RstA, at 2,649,204 to 2,649,920
_02559
MPMX26_02560: MPMX26_02560 - hypothetical protein, at 2,650,518 to 2,653,346
_02560
MPMX26_02561: MPMX26_02561 - hypothetical protein, at 2,653,447 to 2,653,575
_02561
MPMX26_02562: MPMX26_02562 - Ribonucleoside-diphosphate reductase subunit beta, at 2,653,715 to 2,654,998
_02562
Position (kb)
2650
2651
2652
2653
2654 Strain fitness (log2 ratio)
-2
-1
0
1 at 2649.989 kb on - strand at 2650.268 kb on + strand at 2650.325 kb on + strand at 2653.354 kb on + strand at 2653.354 kb on + strand at 2653.354 kb on + strand at 2653.354 kb on + strand at 2653.354 kb on + strand at 2653.354 kb on + strand at 2653.354 kb on + strand at 2653.354 kb on + strand at 2653.354 kb on + strand at 2653.354 kb on + strand at 2653.361 kb on + strand at 2653.453 kb on + strand at 2653.459 kb on + strand at 2653.459 kb on + strand at 2653.525 kb on + strand, within MPMX26_02561 at 2653.525 kb on + strand, within MPMX26_02561 at 2653.525 kb on + strand, within MPMX26_02561 at 2653.525 kb on + strand, within MPMX26_02561 at 2653.525 kb on + strand, within MPMX26_02561 at 2653.525 kb on + strand, within MPMX26_02561 at 2653.525 kb on + strand, within MPMX26_02561 at 2653.552 kb on + strand, within MPMX26_02561 at 2653.576 kb on + strand at 2653.636 kb on + strand at 2653.648 kb on + strand at 2653.650 kb on + strand at 2653.688 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanolamine (N) remove 2,649,989 - -0.7 2,650,268 + +0.6 2,650,325 + +1.2 2,653,354 + +0.2 2,653,354 + +0.0 2,653,354 + -0.0 2,653,354 + +1.0 2,653,354 + +1.0 2,653,354 + +0.8 2,653,354 + +0.3 2,653,354 + +0.3 2,653,354 + +0.3 2,653,354 + +0.1 2,653,361 + +0.7 2,653,453 + +0.7 2,653,459 + +1.0 2,653,459 + +0.3 2,653,525 + MPMX26_02561 0.60 +0.8 2,653,525 + MPMX26_02561 0.60 +0.9 2,653,525 + MPMX26_02561 0.60 +0.5 2,653,525 + MPMX26_02561 0.60 +0.2 2,653,525 + MPMX26_02561 0.60 +0.8 2,653,525 + MPMX26_02561 0.60 +0.1 2,653,525 + MPMX26_02561 0.60 -0.0 2,653,552 + MPMX26_02561 0.81 +0.6 2,653,576 + +0.5 2,653,636 + +1.5 2,653,648 + -1.4 2,653,650 + +1.3 2,653,688 + -2.0
Or see this region's nucleotide sequence