Experiment: Ethanolamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02492 and MPMX26_02493 are separated by 401 nucleotides MPMX26_02493 and MPMX26_02494 are separated by 382 nucleotides
MPMX26_02492: MPMX26_02492 - Lysine-specific permease, at 2,578,778 to 2,580,241
_02492
MPMX26_02493: MPMX26_02493 - Outer membrane protein Omp38, at 2,580,643 to 2,581,689
_02493
MPMX26_02494: MPMX26_02494 - hypothetical protein, at 2,582,072 to 2,582,596
_02494
Position (kb)
2580
2581
2582 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 2579.646 kb on + strand, within MPMX26_02492 at 2579.654 kb on + strand, within MPMX26_02492 at 2579.714 kb on + strand, within MPMX26_02492 at 2579.719 kb on + strand, within MPMX26_02492 at 2579.719 kb on + strand, within MPMX26_02492 at 2579.753 kb on + strand, within MPMX26_02492 at 2579.753 kb on + strand, within MPMX26_02492 at 2579.788 kb on + strand, within MPMX26_02492 at 2579.801 kb on + strand, within MPMX26_02492 at 2579.821 kb on + strand, within MPMX26_02492 at 2579.856 kb on + strand, within MPMX26_02492 at 2579.879 kb on + strand, within MPMX26_02492 at 2579.879 kb on + strand, within MPMX26_02492 at 2579.933 kb on + strand, within MPMX26_02492 at 2579.965 kb on + strand, within MPMX26_02492 at 2579.965 kb on + strand, within MPMX26_02492 at 2579.965 kb on + strand, within MPMX26_02492 at 2580.001 kb on + strand, within MPMX26_02492 at 2580.078 kb on + strand, within MPMX26_02492 at 2580.086 kb on + strand, within MPMX26_02492 at 2580.111 kb on + strand at 2580.111 kb on + strand at 2580.111 kb on + strand at 2580.116 kb on + strand at 2580.121 kb on + strand at 2580.121 kb on + strand at 2580.121 kb on + strand at 2580.128 kb on + strand at 2580.143 kb on + strand at 2580.162 kb on + strand at 2580.162 kb on + strand at 2580.168 kb on + strand at 2580.231 kb on + strand at 2580.231 kb on + strand at 2580.231 kb on + strand at 2580.231 kb on + strand at 2580.231 kb on + strand at 2580.231 kb on + strand at 2580.241 kb on + strand at 2580.241 kb on + strand at 2580.283 kb on + strand at 2580.297 kb on + strand at 2580.297 kb on + strand at 2580.299 kb on + strand at 2580.658 kb on - strand at 2580.672 kb on - strand at 2580.677 kb on - strand at 2580.677 kb on - strand at 2580.774 kb on - strand, within MPMX26_02493 at 2580.774 kb on - strand, within MPMX26_02493 at 2580.774 kb on - strand, within MPMX26_02493 at 2580.774 kb on - strand, within MPMX26_02493 at 2580.797 kb on - strand, within MPMX26_02493 at 2580.797 kb on - strand, within MPMX26_02493 at 2580.797 kb on - strand, within MPMX26_02493 at 2580.802 kb on - strand, within MPMX26_02493 at 2580.821 kb on - strand, within MPMX26_02493 at 2580.835 kb on - strand, within MPMX26_02493 at 2580.873 kb on - strand, within MPMX26_02493 at 2580.882 kb on - strand, within MPMX26_02493 at 2580.882 kb on - strand, within MPMX26_02493 at 2580.882 kb on - strand, within MPMX26_02493 at 2580.917 kb on - strand, within MPMX26_02493 at 2580.966 kb on - strand, within MPMX26_02493 at 2581.013 kb on - strand, within MPMX26_02493 at 2581.037 kb on - strand, within MPMX26_02493 at 2581.037 kb on - strand, within MPMX26_02493 at 2581.105 kb on - strand, within MPMX26_02493 at 2581.105 kb on - strand, within MPMX26_02493 at 2581.105 kb on - strand, within MPMX26_02493 at 2581.105 kb on - strand, within MPMX26_02493 at 2581.105 kb on - strand, within MPMX26_02493 at 2581.105 kb on - strand, within MPMX26_02493 at 2581.105 kb on - strand, within MPMX26_02493 at 2581.131 kb on - strand, within MPMX26_02493 at 2581.131 kb on - strand, within MPMX26_02493 at 2581.131 kb on - strand, within MPMX26_02493 at 2581.140 kb on - strand, within MPMX26_02493 at 2581.140 kb on - strand, within MPMX26_02493 at 2581.140 kb on - strand, within MPMX26_02493 at 2581.140 kb on - strand, within MPMX26_02493 at 2581.140 kb on - strand, within MPMX26_02493 at 2581.147 kb on - strand, within MPMX26_02493 at 2581.150 kb on - strand, within MPMX26_02493 at 2581.150 kb on - strand, within MPMX26_02493 at 2581.178 kb on - strand, within MPMX26_02493 at 2581.178 kb on - strand, within MPMX26_02493 at 2581.193 kb on - strand, within MPMX26_02493 at 2581.195 kb on - strand, within MPMX26_02493 at 2581.236 kb on - strand, within MPMX26_02493 at 2581.255 kb on - strand, within MPMX26_02493 at 2581.275 kb on - strand, within MPMX26_02493 at 2581.275 kb on - strand, within MPMX26_02493 at 2581.275 kb on - strand, within MPMX26_02493 at 2581.300 kb on - strand, within MPMX26_02493 at 2581.327 kb on - strand, within MPMX26_02493 at 2581.327 kb on - strand, within MPMX26_02493 at 2581.345 kb on - strand, within MPMX26_02493 at 2581.372 kb on - strand, within MPMX26_02493 at 2581.379 kb on - strand, within MPMX26_02493 at 2581.379 kb on - strand, within MPMX26_02493 at 2581.379 kb on - strand, within MPMX26_02493 at 2581.379 kb on - strand, within MPMX26_02493 at 2581.379 kb on - strand, within MPMX26_02493 at 2581.379 kb on - strand, within MPMX26_02493 at 2581.379 kb on - strand, within MPMX26_02493 at 2581.379 kb on - strand, within MPMX26_02493 at 2581.379 kb on - strand, within MPMX26_02493 at 2581.379 kb on - strand, within MPMX26_02493 at 2581.379 kb on - strand, within MPMX26_02493 at 2581.417 kb on - strand, within MPMX26_02493 at 2581.450 kb on - strand, within MPMX26_02493 at 2581.450 kb on - strand, within MPMX26_02493 at 2581.450 kb on - strand, within MPMX26_02493 at 2581.450 kb on - strand, within MPMX26_02493 at 2581.450 kb on - strand, within MPMX26_02493 at 2581.494 kb on - strand, within MPMX26_02493 at 2581.496 kb on - strand, within MPMX26_02493 at 2581.496 kb on - strand, within MPMX26_02493 at 2581.496 kb on - strand, within MPMX26_02493 at 2581.496 kb on - strand, within MPMX26_02493 at 2581.496 kb on - strand, within MPMX26_02493 at 2581.496 kb on - strand, within MPMX26_02493 at 2581.503 kb on - strand, within MPMX26_02493 at 2581.503 kb on - strand, within MPMX26_02493 at 2581.508 kb on - strand, within MPMX26_02493 at 2581.508 kb on - strand, within MPMX26_02493 at 2581.538 kb on - strand, within MPMX26_02493 at 2581.538 kb on - strand, within MPMX26_02493 at 2581.538 kb on - strand, within MPMX26_02493 at 2581.573 kb on - strand, within MPMX26_02493 at 2581.586 kb on - strand at 2581.619 kb on - strand at 2581.619 kb on - strand at 2581.666 kb on - strand at 2581.676 kb on - strand at 2581.676 kb on - strand at 2581.676 kb on - strand at 2581.717 kb on - strand at 2581.736 kb on - strand at 2581.736 kb on - strand at 2581.755 kb on - strand at 2581.758 kb on - strand at 2581.767 kb on - strand at 2581.767 kb on - strand at 2582.274 kb on + strand, within MPMX26_02494 at 2582.286 kb on + strand, within MPMX26_02494 at 2582.286 kb on + strand, within MPMX26_02494 at 2582.286 kb on + strand, within MPMX26_02494 at 2582.286 kb on + strand, within MPMX26_02494 at 2582.286 kb on + strand, within MPMX26_02494 at 2582.286 kb on + strand, within MPMX26_02494 at 2582.286 kb on + strand, within MPMX26_02494 at 2582.286 kb on + strand, within MPMX26_02494 at 2582.286 kb on + strand, within MPMX26_02494 at 2582.286 kb on + strand, within MPMX26_02494 at 2582.286 kb on + strand, within MPMX26_02494 at 2582.286 kb on + strand, within MPMX26_02494 at 2582.286 kb on + strand, within MPMX26_02494 at 2582.286 kb on + strand, within MPMX26_02494 at 2582.286 kb on + strand, within MPMX26_02494 at 2582.286 kb on + strand, within MPMX26_02494 at 2582.286 kb on + strand, within MPMX26_02494 at 2582.286 kb on + strand, within MPMX26_02494 at 2582.296 kb on + strand, within MPMX26_02494 at 2582.296 kb on + strand, within MPMX26_02494 at 2582.296 kb on + strand, within MPMX26_02494 at 2582.296 kb on + strand, within MPMX26_02494 at 2582.296 kb on + strand, within MPMX26_02494 at 2582.296 kb on + strand, within MPMX26_02494 at 2582.296 kb on + strand, within MPMX26_02494 at 2582.296 kb on + strand, within MPMX26_02494 at 2582.296 kb on + strand, within MPMX26_02494 at 2582.296 kb on + strand, within MPMX26_02494 at 2582.296 kb on + strand, within MPMX26_02494 at 2582.296 kb on + strand, within MPMX26_02494 at 2582.296 kb on + strand, within MPMX26_02494
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanolamine (N) remove 2,579,646 + MPMX26_02492 0.59 -0.0 2,579,654 + MPMX26_02492 0.60 +0.3 2,579,714 + MPMX26_02492 0.64 +0.5 2,579,719 + MPMX26_02492 0.64 +1.0 2,579,719 + MPMX26_02492 0.64 +0.4 2,579,753 + MPMX26_02492 0.67 +1.2 2,579,753 + MPMX26_02492 0.67 +0.3 2,579,788 + MPMX26_02492 0.69 +0.6 2,579,801 + MPMX26_02492 0.70 +0.7 2,579,821 + MPMX26_02492 0.71 +0.8 2,579,856 + MPMX26_02492 0.74 +0.9 2,579,879 + MPMX26_02492 0.75 +0.8 2,579,879 + MPMX26_02492 0.75 +0.5 2,579,933 + MPMX26_02492 0.79 +0.7 2,579,965 + MPMX26_02492 0.81 +0.8 2,579,965 + MPMX26_02492 0.81 -0.0 2,579,965 + MPMX26_02492 0.81 +0.3 2,580,001 + MPMX26_02492 0.84 +1.6 2,580,078 + MPMX26_02492 0.89 +1.6 2,580,086 + MPMX26_02492 0.89 +0.5 2,580,111 + +0.9 2,580,111 + +0.5 2,580,111 + +0.6 2,580,116 + +0.6 2,580,121 + +0.6 2,580,121 + +0.6 2,580,121 + -0.1 2,580,128 + +0.9 2,580,143 + +0.9 2,580,162 + -1.1 2,580,162 + +1.6 2,580,168 + +0.4 2,580,231 + -0.5 2,580,231 + -0.7 2,580,231 + +1.3 2,580,231 + -0.5 2,580,231 + -1.1 2,580,231 + +0.2 2,580,241 + -0.9 2,580,241 + +1.1 2,580,283 + +0.0 2,580,297 + -0.3 2,580,297 + -1.1 2,580,299 + -0.3 2,580,658 - -1.5 2,580,672 - -2.2 2,580,677 - -1.3 2,580,677 - -0.5 2,580,774 - MPMX26_02493 0.13 -1.9 2,580,774 - MPMX26_02493 0.13 -3.3 2,580,774 - MPMX26_02493 0.13 -4.1 2,580,774 - MPMX26_02493 0.13 -4.4 2,580,797 - MPMX26_02493 0.15 -3.4 2,580,797 - MPMX26_02493 0.15 -4.0 2,580,797 - MPMX26_02493 0.15 -4.3 2,580,802 - MPMX26_02493 0.15 -2.1 2,580,821 - MPMX26_02493 0.17 -4.1 2,580,835 - MPMX26_02493 0.18 -3.6 2,580,873 - MPMX26_02493 0.22 -2.5 2,580,882 - MPMX26_02493 0.23 -5.4 2,580,882 - MPMX26_02493 0.23 -2.8 2,580,882 - MPMX26_02493 0.23 -2.4 2,580,917 - MPMX26_02493 0.26 -3.2 2,580,966 - MPMX26_02493 0.31 -0.8 2,581,013 - MPMX26_02493 0.35 -3.8 2,581,037 - MPMX26_02493 0.38 -5.2 2,581,037 - MPMX26_02493 0.38 -5.0 2,581,105 - MPMX26_02493 0.44 -3.0 2,581,105 - MPMX26_02493 0.44 -3.6 2,581,105 - MPMX26_02493 0.44 -3.6 2,581,105 - MPMX26_02493 0.44 -3.8 2,581,105 - MPMX26_02493 0.44 -3.8 2,581,105 - MPMX26_02493 0.44 -2.3 2,581,105 - MPMX26_02493 0.44 -3.3 2,581,131 - MPMX26_02493 0.47 -0.8 2,581,131 - MPMX26_02493 0.47 -2.5 2,581,131 - MPMX26_02493 0.47 -2.6 2,581,140 - MPMX26_02493 0.47 -2.7 2,581,140 - MPMX26_02493 0.47 -2.6 2,581,140 - MPMX26_02493 0.47 -2.0 2,581,140 - MPMX26_02493 0.47 -1.3 2,581,140 - MPMX26_02493 0.47 -1.0 2,581,147 - MPMX26_02493 0.48 -3.4 2,581,150 - MPMX26_02493 0.48 -1.9 2,581,150 - MPMX26_02493 0.48 -3.0 2,581,178 - MPMX26_02493 0.51 -3.6 2,581,178 - MPMX26_02493 0.51 -3.6 2,581,193 - MPMX26_02493 0.53 -3.6 2,581,195 - MPMX26_02493 0.53 -2.9 2,581,236 - MPMX26_02493 0.57 -0.5 2,581,255 - MPMX26_02493 0.58 -3.9 2,581,275 - MPMX26_02493 0.60 -2.6 2,581,275 - MPMX26_02493 0.60 -2.9 2,581,275 - MPMX26_02493 0.60 -3.3 2,581,300 - MPMX26_02493 0.63 -2.6 2,581,327 - MPMX26_02493 0.65 -2.3 2,581,327 - MPMX26_02493 0.65 -3.7 2,581,345 - MPMX26_02493 0.67 -2.6 2,581,372 - MPMX26_02493 0.70 -4.5 2,581,379 - MPMX26_02493 0.70 -4.9 2,581,379 - MPMX26_02493 0.70 -2.8 2,581,379 - MPMX26_02493 0.70 -3.5 2,581,379 - MPMX26_02493 0.70 -4.3 2,581,379 - MPMX26_02493 0.70 -4.3 2,581,379 - MPMX26_02493 0.70 -2.2 2,581,379 - MPMX26_02493 0.70 -4.4 2,581,379 - MPMX26_02493 0.70 -4.3 2,581,379 - MPMX26_02493 0.70 -4.3 2,581,379 - MPMX26_02493 0.70 -5.5 2,581,379 - MPMX26_02493 0.70 -4.5 2,581,417 - MPMX26_02493 0.74 -3.3 2,581,450 - MPMX26_02493 0.77 -5.3 2,581,450 - MPMX26_02493 0.77 -3.5 2,581,450 - MPMX26_02493 0.77 -0.8 2,581,450 - MPMX26_02493 0.77 -4.6 2,581,450 - MPMX26_02493 0.77 -3.2 2,581,494 - MPMX26_02493 0.81 -1.3 2,581,496 - MPMX26_02493 0.81 -3.8 2,581,496 - MPMX26_02493 0.81 -4.8 2,581,496 - MPMX26_02493 0.81 -5.5 2,581,496 - MPMX26_02493 0.81 -2.7 2,581,496 - MPMX26_02493 0.81 -2.9 2,581,496 - MPMX26_02493 0.81 -5.0 2,581,503 - MPMX26_02493 0.82 -4.7 2,581,503 - MPMX26_02493 0.82 -3.1 2,581,508 - MPMX26_02493 0.83 -2.6 2,581,508 - MPMX26_02493 0.83 -2.0 2,581,538 - MPMX26_02493 0.85 -4.2 2,581,538 - MPMX26_02493 0.85 -3.9 2,581,538 - MPMX26_02493 0.85 -2.6 2,581,573 - MPMX26_02493 0.89 -4.8 2,581,586 - -1.0 2,581,619 - -2.7 2,581,619 - -3.6 2,581,666 - -5.1 2,581,676 - -3.5 2,581,676 - -1.6 2,581,676 - -3.0 2,581,717 - -4.4 2,581,736 - -3.4 2,581,736 - -3.3 2,581,755 - -4.4 2,581,758 - -3.7 2,581,767 - -1.9 2,581,767 - -4.0 2,582,274 + MPMX26_02494 0.38 +0.1 2,582,286 + MPMX26_02494 0.41 -0.2 2,582,286 + MPMX26_02494 0.41 +0.9 2,582,286 + MPMX26_02494 0.41 -0.2 2,582,286 + MPMX26_02494 0.41 +2.4 2,582,286 + MPMX26_02494 0.41 +0.4 2,582,286 + MPMX26_02494 0.41 +0.8 2,582,286 + MPMX26_02494 0.41 -0.0 2,582,286 + MPMX26_02494 0.41 +0.1 2,582,286 + MPMX26_02494 0.41 +0.7 2,582,286 + MPMX26_02494 0.41 +0.6 2,582,286 + MPMX26_02494 0.41 +0.9 2,582,286 + MPMX26_02494 0.41 +0.7 2,582,286 + MPMX26_02494 0.41 +0.1 2,582,286 + MPMX26_02494 0.41 +0.8 2,582,286 + MPMX26_02494 0.41 -2.7 2,582,286 + MPMX26_02494 0.41 +0.2 2,582,286 + MPMX26_02494 0.41 -2.5 2,582,286 + MPMX26_02494 0.41 +0.9 2,582,296 + MPMX26_02494 0.43 -0.9 2,582,296 + MPMX26_02494 0.43 +0.4 2,582,296 + MPMX26_02494 0.43 -0.2 2,582,296 + MPMX26_02494 0.43 +0.1 2,582,296 + MPMX26_02494 0.43 -0.3 2,582,296 + MPMX26_02494 0.43 -0.5 2,582,296 + MPMX26_02494 0.43 -0.3 2,582,296 + MPMX26_02494 0.43 -0.3 2,582,296 + MPMX26_02494 0.43 +0.1 2,582,296 + MPMX26_02494 0.43 +0.2 2,582,296 + MPMX26_02494 0.43 -0.2 2,582,296 + MPMX26_02494 0.43 +0.5 2,582,296 + MPMX26_02494 0.43 -0.8
Or see this region's nucleotide sequence