Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02493

Experiment: Ethanolamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02492 and MPMX26_02493 are separated by 401 nucleotidesMPMX26_02493 and MPMX26_02494 are separated by 382 nucleotides MPMX26_02492: MPMX26_02492 - Lysine-specific permease, at 2,578,778 to 2,580,241 _02492 MPMX26_02493: MPMX26_02493 - Outer membrane protein Omp38, at 2,580,643 to 2,581,689 _02493 MPMX26_02494: MPMX26_02494 - hypothetical protein, at 2,582,072 to 2,582,596 _02494 Position (kb) 2580 2581 2582Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2at 2579.646 kb on + strand, within MPMX26_02492at 2579.654 kb on + strand, within MPMX26_02492at 2579.714 kb on + strand, within MPMX26_02492at 2579.719 kb on + strand, within MPMX26_02492at 2579.719 kb on + strand, within MPMX26_02492at 2579.753 kb on + strand, within MPMX26_02492at 2579.753 kb on + strand, within MPMX26_02492at 2579.788 kb on + strand, within MPMX26_02492at 2579.801 kb on + strand, within MPMX26_02492at 2579.821 kb on + strand, within MPMX26_02492at 2579.856 kb on + strand, within MPMX26_02492at 2579.879 kb on + strand, within MPMX26_02492at 2579.879 kb on + strand, within MPMX26_02492at 2579.933 kb on + strand, within MPMX26_02492at 2579.965 kb on + strand, within MPMX26_02492at 2579.965 kb on + strand, within MPMX26_02492at 2579.965 kb on + strand, within MPMX26_02492at 2580.001 kb on + strand, within MPMX26_02492at 2580.078 kb on + strand, within MPMX26_02492at 2580.086 kb on + strand, within MPMX26_02492at 2580.111 kb on + strandat 2580.111 kb on + strandat 2580.111 kb on + strandat 2580.116 kb on + strandat 2580.121 kb on + strandat 2580.121 kb on + strandat 2580.121 kb on + strandat 2580.128 kb on + strandat 2580.143 kb on + strandat 2580.162 kb on + strandat 2580.162 kb on + strandat 2580.168 kb on + strandat 2580.231 kb on + strandat 2580.231 kb on + strandat 2580.231 kb on + strandat 2580.231 kb on + strandat 2580.231 kb on + strandat 2580.231 kb on + strandat 2580.241 kb on + strandat 2580.241 kb on + strandat 2580.283 kb on + strandat 2580.297 kb on + strandat 2580.297 kb on + strandat 2580.299 kb on + strandat 2580.658 kb on - strandat 2580.672 kb on - strandat 2580.677 kb on - strandat 2580.677 kb on - strandat 2580.774 kb on - strand, within MPMX26_02493at 2580.774 kb on - strand, within MPMX26_02493at 2580.774 kb on - strand, within MPMX26_02493at 2580.774 kb on - strand, within MPMX26_02493at 2580.797 kb on - strand, within MPMX26_02493at 2580.797 kb on - strand, within MPMX26_02493at 2580.797 kb on - strand, within MPMX26_02493at 2580.802 kb on - strand, within MPMX26_02493at 2580.821 kb on - strand, within MPMX26_02493at 2580.835 kb on - strand, within MPMX26_02493at 2580.873 kb on - strand, within MPMX26_02493at 2580.882 kb on - strand, within MPMX26_02493at 2580.882 kb on - strand, within MPMX26_02493at 2580.882 kb on - strand, within MPMX26_02493at 2580.917 kb on - strand, within MPMX26_02493at 2580.966 kb on - strand, within MPMX26_02493at 2581.013 kb on - strand, within MPMX26_02493at 2581.037 kb on - strand, within MPMX26_02493at 2581.037 kb on - strand, within MPMX26_02493at 2581.105 kb on - strand, within MPMX26_02493at 2581.105 kb on - strand, within MPMX26_02493at 2581.105 kb on - strand, within MPMX26_02493at 2581.105 kb on - strand, within MPMX26_02493at 2581.105 kb on - strand, within MPMX26_02493at 2581.105 kb on - strand, within MPMX26_02493at 2581.105 kb on - strand, within MPMX26_02493at 2581.131 kb on - strand, within MPMX26_02493at 2581.131 kb on - strand, within MPMX26_02493at 2581.131 kb on - strand, within MPMX26_02493at 2581.140 kb on - strand, within MPMX26_02493at 2581.140 kb on - strand, within MPMX26_02493at 2581.140 kb on - strand, within MPMX26_02493at 2581.140 kb on - strand, within MPMX26_02493at 2581.140 kb on - strand, within MPMX26_02493at 2581.147 kb on - strand, within MPMX26_02493at 2581.150 kb on - strand, within MPMX26_02493at 2581.150 kb on - strand, within MPMX26_02493at 2581.178 kb on - strand, within MPMX26_02493at 2581.178 kb on - strand, within MPMX26_02493at 2581.193 kb on - strand, within MPMX26_02493at 2581.195 kb on - strand, within MPMX26_02493at 2581.236 kb on - strand, within MPMX26_02493at 2581.255 kb on - strand, within MPMX26_02493at 2581.275 kb on - strand, within MPMX26_02493at 2581.275 kb on - strand, within MPMX26_02493at 2581.275 kb on - strand, within MPMX26_02493at 2581.300 kb on - strand, within MPMX26_02493at 2581.327 kb on - strand, within MPMX26_02493at 2581.327 kb on - strand, within MPMX26_02493at 2581.345 kb on - strand, within MPMX26_02493at 2581.372 kb on - strand, within MPMX26_02493at 2581.379 kb on - strand, within MPMX26_02493at 2581.379 kb on - strand, within MPMX26_02493at 2581.379 kb on - strand, within MPMX26_02493at 2581.379 kb on - strand, within MPMX26_02493at 2581.379 kb on - strand, within MPMX26_02493at 2581.379 kb on - strand, within MPMX26_02493at 2581.379 kb on - strand, within MPMX26_02493at 2581.379 kb on - strand, within MPMX26_02493at 2581.379 kb on - strand, within MPMX26_02493at 2581.379 kb on - strand, within MPMX26_02493at 2581.379 kb on - strand, within MPMX26_02493at 2581.417 kb on - strand, within MPMX26_02493at 2581.450 kb on - strand, within MPMX26_02493at 2581.450 kb on - strand, within MPMX26_02493at 2581.450 kb on - strand, within MPMX26_02493at 2581.450 kb on - strand, within MPMX26_02493at 2581.450 kb on - strand, within MPMX26_02493at 2581.494 kb on - strand, within MPMX26_02493at 2581.496 kb on - strand, within MPMX26_02493at 2581.496 kb on - strand, within MPMX26_02493at 2581.496 kb on - strand, within MPMX26_02493at 2581.496 kb on - strand, within MPMX26_02493at 2581.496 kb on - strand, within MPMX26_02493at 2581.496 kb on - strand, within MPMX26_02493at 2581.503 kb on - strand, within MPMX26_02493at 2581.503 kb on - strand, within MPMX26_02493at 2581.508 kb on - strand, within MPMX26_02493at 2581.508 kb on - strand, within MPMX26_02493at 2581.538 kb on - strand, within MPMX26_02493at 2581.538 kb on - strand, within MPMX26_02493at 2581.538 kb on - strand, within MPMX26_02493at 2581.573 kb on - strand, within MPMX26_02493at 2581.586 kb on - strandat 2581.619 kb on - strandat 2581.619 kb on - strandat 2581.666 kb on - strandat 2581.676 kb on - strandat 2581.676 kb on - strandat 2581.676 kb on - strandat 2581.717 kb on - strandat 2581.736 kb on - strandat 2581.736 kb on - strandat 2581.755 kb on - strandat 2581.758 kb on - strandat 2581.767 kb on - strandat 2581.767 kb on - strandat 2582.274 kb on + strand, within MPMX26_02494at 2582.286 kb on + strand, within MPMX26_02494at 2582.286 kb on + strand, within MPMX26_02494at 2582.286 kb on + strand, within MPMX26_02494at 2582.286 kb on + strand, within MPMX26_02494at 2582.286 kb on + strand, within MPMX26_02494at 2582.286 kb on + strand, within MPMX26_02494at 2582.286 kb on + strand, within MPMX26_02494at 2582.286 kb on + strand, within MPMX26_02494at 2582.286 kb on + strand, within MPMX26_02494at 2582.286 kb on + strand, within MPMX26_02494at 2582.286 kb on + strand, within MPMX26_02494at 2582.286 kb on + strand, within MPMX26_02494at 2582.286 kb on + strand, within MPMX26_02494at 2582.286 kb on + strand, within MPMX26_02494at 2582.286 kb on + strand, within MPMX26_02494at 2582.286 kb on + strand, within MPMX26_02494at 2582.286 kb on + strand, within MPMX26_02494at 2582.286 kb on + strand, within MPMX26_02494at 2582.296 kb on + strand, within MPMX26_02494at 2582.296 kb on + strand, within MPMX26_02494at 2582.296 kb on + strand, within MPMX26_02494at 2582.296 kb on + strand, within MPMX26_02494at 2582.296 kb on + strand, within MPMX26_02494at 2582.296 kb on + strand, within MPMX26_02494at 2582.296 kb on + strand, within MPMX26_02494at 2582.296 kb on + strand, within MPMX26_02494at 2582.296 kb on + strand, within MPMX26_02494at 2582.296 kb on + strand, within MPMX26_02494at 2582.296 kb on + strand, within MPMX26_02494at 2582.296 kb on + strand, within MPMX26_02494at 2582.296 kb on + strand, within MPMX26_02494

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Per-strain Table

Position Strand Gene LocusTag Fraction Ethanolamine (N)
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2,579,646 + MPMX26_02492 0.59 -0.0
2,579,654 + MPMX26_02492 0.60 +0.3
2,579,714 + MPMX26_02492 0.64 +0.5
2,579,719 + MPMX26_02492 0.64 +1.0
2,579,719 + MPMX26_02492 0.64 +0.4
2,579,753 + MPMX26_02492 0.67 +1.2
2,579,753 + MPMX26_02492 0.67 +0.3
2,579,788 + MPMX26_02492 0.69 +0.6
2,579,801 + MPMX26_02492 0.70 +0.7
2,579,821 + MPMX26_02492 0.71 +0.8
2,579,856 + MPMX26_02492 0.74 +0.9
2,579,879 + MPMX26_02492 0.75 +0.8
2,579,879 + MPMX26_02492 0.75 +0.5
2,579,933 + MPMX26_02492 0.79 +0.7
2,579,965 + MPMX26_02492 0.81 +0.8
2,579,965 + MPMX26_02492 0.81 -0.0
2,579,965 + MPMX26_02492 0.81 +0.3
2,580,001 + MPMX26_02492 0.84 +1.6
2,580,078 + MPMX26_02492 0.89 +1.6
2,580,086 + MPMX26_02492 0.89 +0.5
2,580,111 + +0.9
2,580,111 + +0.5
2,580,111 + +0.6
2,580,116 + +0.6
2,580,121 + +0.6
2,580,121 + +0.6
2,580,121 + -0.1
2,580,128 + +0.9
2,580,143 + +0.9
2,580,162 + -1.1
2,580,162 + +1.6
2,580,168 + +0.4
2,580,231 + -0.5
2,580,231 + -0.7
2,580,231 + +1.3
2,580,231 + -0.5
2,580,231 + -1.1
2,580,231 + +0.2
2,580,241 + -0.9
2,580,241 + +1.1
2,580,283 + +0.0
2,580,297 + -0.3
2,580,297 + -1.1
2,580,299 + -0.3
2,580,658 - -1.5
2,580,672 - -2.2
2,580,677 - -1.3
2,580,677 - -0.5
2,580,774 - MPMX26_02493 0.13 -1.9
2,580,774 - MPMX26_02493 0.13 -3.3
2,580,774 - MPMX26_02493 0.13 -4.1
2,580,774 - MPMX26_02493 0.13 -4.4
2,580,797 - MPMX26_02493 0.15 -3.4
2,580,797 - MPMX26_02493 0.15 -4.0
2,580,797 - MPMX26_02493 0.15 -4.3
2,580,802 - MPMX26_02493 0.15 -2.1
2,580,821 - MPMX26_02493 0.17 -4.1
2,580,835 - MPMX26_02493 0.18 -3.6
2,580,873 - MPMX26_02493 0.22 -2.5
2,580,882 - MPMX26_02493 0.23 -5.4
2,580,882 - MPMX26_02493 0.23 -2.8
2,580,882 - MPMX26_02493 0.23 -2.4
2,580,917 - MPMX26_02493 0.26 -3.2
2,580,966 - MPMX26_02493 0.31 -0.8
2,581,013 - MPMX26_02493 0.35 -3.8
2,581,037 - MPMX26_02493 0.38 -5.2
2,581,037 - MPMX26_02493 0.38 -5.0
2,581,105 - MPMX26_02493 0.44 -3.0
2,581,105 - MPMX26_02493 0.44 -3.6
2,581,105 - MPMX26_02493 0.44 -3.6
2,581,105 - MPMX26_02493 0.44 -3.8
2,581,105 - MPMX26_02493 0.44 -3.8
2,581,105 - MPMX26_02493 0.44 -2.3
2,581,105 - MPMX26_02493 0.44 -3.3
2,581,131 - MPMX26_02493 0.47 -0.8
2,581,131 - MPMX26_02493 0.47 -2.5
2,581,131 - MPMX26_02493 0.47 -2.6
2,581,140 - MPMX26_02493 0.47 -2.7
2,581,140 - MPMX26_02493 0.47 -2.6
2,581,140 - MPMX26_02493 0.47 -2.0
2,581,140 - MPMX26_02493 0.47 -1.3
2,581,140 - MPMX26_02493 0.47 -1.0
2,581,147 - MPMX26_02493 0.48 -3.4
2,581,150 - MPMX26_02493 0.48 -1.9
2,581,150 - MPMX26_02493 0.48 -3.0
2,581,178 - MPMX26_02493 0.51 -3.6
2,581,178 - MPMX26_02493 0.51 -3.6
2,581,193 - MPMX26_02493 0.53 -3.6
2,581,195 - MPMX26_02493 0.53 -2.9
2,581,236 - MPMX26_02493 0.57 -0.5
2,581,255 - MPMX26_02493 0.58 -3.9
2,581,275 - MPMX26_02493 0.60 -2.6
2,581,275 - MPMX26_02493 0.60 -2.9
2,581,275 - MPMX26_02493 0.60 -3.3
2,581,300 - MPMX26_02493 0.63 -2.6
2,581,327 - MPMX26_02493 0.65 -2.3
2,581,327 - MPMX26_02493 0.65 -3.7
2,581,345 - MPMX26_02493 0.67 -2.6
2,581,372 - MPMX26_02493 0.70 -4.5
2,581,379 - MPMX26_02493 0.70 -4.9
2,581,379 - MPMX26_02493 0.70 -2.8
2,581,379 - MPMX26_02493 0.70 -3.5
2,581,379 - MPMX26_02493 0.70 -4.3
2,581,379 - MPMX26_02493 0.70 -4.3
2,581,379 - MPMX26_02493 0.70 -2.2
2,581,379 - MPMX26_02493 0.70 -4.4
2,581,379 - MPMX26_02493 0.70 -4.3
2,581,379 - MPMX26_02493 0.70 -4.3
2,581,379 - MPMX26_02493 0.70 -5.5
2,581,379 - MPMX26_02493 0.70 -4.5
2,581,417 - MPMX26_02493 0.74 -3.3
2,581,450 - MPMX26_02493 0.77 -5.3
2,581,450 - MPMX26_02493 0.77 -3.5
2,581,450 - MPMX26_02493 0.77 -0.8
2,581,450 - MPMX26_02493 0.77 -4.6
2,581,450 - MPMX26_02493 0.77 -3.2
2,581,494 - MPMX26_02493 0.81 -1.3
2,581,496 - MPMX26_02493 0.81 -3.8
2,581,496 - MPMX26_02493 0.81 -4.8
2,581,496 - MPMX26_02493 0.81 -5.5
2,581,496 - MPMX26_02493 0.81 -2.7
2,581,496 - MPMX26_02493 0.81 -2.9
2,581,496 - MPMX26_02493 0.81 -5.0
2,581,503 - MPMX26_02493 0.82 -4.7
2,581,503 - MPMX26_02493 0.82 -3.1
2,581,508 - MPMX26_02493 0.83 -2.6
2,581,508 - MPMX26_02493 0.83 -2.0
2,581,538 - MPMX26_02493 0.85 -4.2
2,581,538 - MPMX26_02493 0.85 -3.9
2,581,538 - MPMX26_02493 0.85 -2.6
2,581,573 - MPMX26_02493 0.89 -4.8
2,581,586 - -1.0
2,581,619 - -2.7
2,581,619 - -3.6
2,581,666 - -5.1
2,581,676 - -3.5
2,581,676 - -1.6
2,581,676 - -3.0
2,581,717 - -4.4
2,581,736 - -3.4
2,581,736 - -3.3
2,581,755 - -4.4
2,581,758 - -3.7
2,581,767 - -1.9
2,581,767 - -4.0
2,582,274 + MPMX26_02494 0.38 +0.1
2,582,286 + MPMX26_02494 0.41 -0.2
2,582,286 + MPMX26_02494 0.41 +0.9
2,582,286 + MPMX26_02494 0.41 -0.2
2,582,286 + MPMX26_02494 0.41 +2.4
2,582,286 + MPMX26_02494 0.41 +0.4
2,582,286 + MPMX26_02494 0.41 +0.8
2,582,286 + MPMX26_02494 0.41 -0.0
2,582,286 + MPMX26_02494 0.41 +0.1
2,582,286 + MPMX26_02494 0.41 +0.7
2,582,286 + MPMX26_02494 0.41 +0.6
2,582,286 + MPMX26_02494 0.41 +0.9
2,582,286 + MPMX26_02494 0.41 +0.7
2,582,286 + MPMX26_02494 0.41 +0.1
2,582,286 + MPMX26_02494 0.41 +0.8
2,582,286 + MPMX26_02494 0.41 -2.7
2,582,286 + MPMX26_02494 0.41 +0.2
2,582,286 + MPMX26_02494 0.41 -2.5
2,582,286 + MPMX26_02494 0.41 +0.9
2,582,296 + MPMX26_02494 0.43 -0.9
2,582,296 + MPMX26_02494 0.43 +0.4
2,582,296 + MPMX26_02494 0.43 -0.2
2,582,296 + MPMX26_02494 0.43 +0.1
2,582,296 + MPMX26_02494 0.43 -0.3
2,582,296 + MPMX26_02494 0.43 -0.5
2,582,296 + MPMX26_02494 0.43 -0.3
2,582,296 + MPMX26_02494 0.43 -0.3
2,582,296 + MPMX26_02494 0.43 +0.1
2,582,296 + MPMX26_02494 0.43 +0.2
2,582,296 + MPMX26_02494 0.43 -0.2
2,582,296 + MPMX26_02494 0.43 +0.5
2,582,296 + MPMX26_02494 0.43 -0.8

Or see this region's nucleotide sequence