Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02298

Experiment: Ethanolamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02297 and MPMX26_02298 are separated by 857 nucleotidesMPMX26_02298 and MPMX26_02299 are separated by 152 nucleotides MPMX26_02297: MPMX26_02297 - Hippurate hydrolase, at 2,366,493 to 2,367,197 _02297 MPMX26_02298: MPMX26_02298 - 5-formyltetrahydrofolate cyclo-ligase, at 2,368,055 to 2,368,636 _02298 MPMX26_02299: MPMX26_02299 - Lon protease, at 2,368,789 to 2,371,215 _02299 Position (kb) 2368 2369Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 2367.926 kb on + strandat 2368.006 kb on + strandat 2368.280 kb on + strand, within MPMX26_02298at 2368.280 kb on + strand, within MPMX26_02298at 2368.280 kb on + strand, within MPMX26_02298at 2368.326 kb on + strand, within MPMX26_02298at 2368.348 kb on + strand, within MPMX26_02298at 2368.381 kb on + strand, within MPMX26_02298at 2368.381 kb on + strand, within MPMX26_02298at 2368.469 kb on + strand, within MPMX26_02298at 2368.469 kb on + strand, within MPMX26_02298at 2368.528 kb on + strand, within MPMX26_02298at 2368.756 kb on + strandat 2368.773 kb on + strandat 2368.773 kb on + strandat 2368.773 kb on + strandat 2368.773 kb on + strandat 2368.775 kb on + strandat 2368.775 kb on + strandat 2368.775 kb on + strandat 2368.775 kb on + strandat 2368.775 kb on + strandat 2368.775 kb on + strandat 2368.775 kb on + strandat 2368.775 kb on + strandat 2368.775 kb on + strandat 2368.775 kb on + strandat 2368.775 kb on + strandat 2368.785 kb on + strandat 2368.817 kb on + strandat 2368.817 kb on + strandat 2368.817 kb on + strandat 2368.830 kb on + strandat 2368.830 kb on + strandat 2368.838 kb on + strandat 2368.862 kb on + strandat 2368.865 kb on + strandat 2368.867 kb on + strandat 2368.928 kb on + strandat 2368.928 kb on + strandat 2368.939 kb on + strandat 2368.939 kb on + strandat 2368.939 kb on + strandat 2368.939 kb on + strandat 2368.993 kb on + strandat 2369.007 kb on + strandat 2369.032 kb on + strand, within MPMX26_02299at 2369.034 kb on + strand, within MPMX26_02299at 2369.078 kb on + strand, within MPMX26_02299at 2369.078 kb on + strand, within MPMX26_02299at 2369.098 kb on + strand, within MPMX26_02299at 2369.098 kb on + strand, within MPMX26_02299at 2369.108 kb on + strand, within MPMX26_02299at 2369.108 kb on + strand, within MPMX26_02299at 2369.108 kb on + strand, within MPMX26_02299at 2369.108 kb on + strand, within MPMX26_02299at 2369.108 kb on + strand, within MPMX26_02299at 2369.108 kb on + strand, within MPMX26_02299at 2369.108 kb on + strand, within MPMX26_02299at 2369.108 kb on + strand, within MPMX26_02299at 2369.108 kb on + strand, within MPMX26_02299at 2369.108 kb on + strand, within MPMX26_02299at 2369.108 kb on + strand, within MPMX26_02299at 2369.108 kb on + strand, within MPMX26_02299at 2369.108 kb on + strand, within MPMX26_02299at 2369.108 kb on + strand, within MPMX26_02299at 2369.108 kb on + strand, within MPMX26_02299at 2369.108 kb on + strand, within MPMX26_02299at 2369.108 kb on + strand, within MPMX26_02299at 2369.109 kb on + strand, within MPMX26_02299at 2369.177 kb on + strand, within MPMX26_02299at 2369.179 kb on + strand, within MPMX26_02299at 2369.204 kb on + strand, within MPMX26_02299at 2369.289 kb on + strand, within MPMX26_02299at 2369.375 kb on + strand, within MPMX26_02299at 2369.406 kb on + strand, within MPMX26_02299at 2369.444 kb on + strand, within MPMX26_02299at 2369.448 kb on + strand, within MPMX26_02299at 2369.449 kb on + strand, within MPMX26_02299at 2369.456 kb on + strand, within MPMX26_02299at 2369.470 kb on + strand, within MPMX26_02299at 2369.550 kb on + strand, within MPMX26_02299

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Per-strain Table

Position Strand Gene LocusTag Fraction Ethanolamine (N)
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2,367,926 + +1.5
2,368,006 + -2.1
2,368,280 + MPMX26_02298 0.39 -2.7
2,368,280 + MPMX26_02298 0.39 -2.7
2,368,280 + MPMX26_02298 0.39 -1.0
2,368,326 + MPMX26_02298 0.47 -1.0
2,368,348 + MPMX26_02298 0.50 -2.2
2,368,381 + MPMX26_02298 0.56 -2.8
2,368,381 + MPMX26_02298 0.56 -2.4
2,368,469 + MPMX26_02298 0.71 -1.9
2,368,469 + MPMX26_02298 0.71 -1.0
2,368,528 + MPMX26_02298 0.81 -1.0
2,368,756 + -0.5
2,368,773 + -3.1
2,368,773 + +0.1
2,368,773 + -0.4
2,368,773 + +0.5
2,368,775 + +0.8
2,368,775 + +0.8
2,368,775 + +1.0
2,368,775 + +0.3
2,368,775 + -0.2
2,368,775 + +0.5
2,368,775 + +1.4
2,368,775 + -0.5
2,368,775 + -0.4
2,368,775 + -0.2
2,368,775 + -2.1
2,368,785 + -1.4
2,368,817 + -1.7
2,368,817 + -1.6
2,368,817 + -2.1
2,368,830 + -3.4
2,368,830 + -2.4
2,368,838 + -1.6
2,368,862 + -0.6
2,368,865 + -2.0
2,368,867 + -0.7
2,368,928 + -2.9
2,368,928 + -2.2
2,368,939 + -1.1
2,368,939 + -1.4
2,368,939 + -3.8
2,368,939 + -2.0
2,368,993 + -1.9
2,369,007 + -1.4
2,369,032 + MPMX26_02299 0.10 -1.5
2,369,034 + MPMX26_02299 0.10 -1.9
2,369,078 + MPMX26_02299 0.12 -2.8
2,369,078 + MPMX26_02299 0.12 -0.7
2,369,098 + MPMX26_02299 0.13 -2.5
2,369,098 + MPMX26_02299 0.13 -2.2
2,369,108 + MPMX26_02299 0.13 -0.9
2,369,108 + MPMX26_02299 0.13 -0.6
2,369,108 + MPMX26_02299 0.13 +1.1
2,369,108 + MPMX26_02299 0.13 -1.4
2,369,108 + MPMX26_02299 0.13 -1.7
2,369,108 + MPMX26_02299 0.13 -2.0
2,369,108 + MPMX26_02299 0.13 -2.4
2,369,108 + MPMX26_02299 0.13 -0.6
2,369,108 + MPMX26_02299 0.13 -0.9
2,369,108 + MPMX26_02299 0.13 -1.5
2,369,108 + MPMX26_02299 0.13 -2.5
2,369,108 + MPMX26_02299 0.13 -0.1
2,369,108 + MPMX26_02299 0.13 -2.0
2,369,108 + MPMX26_02299 0.13 +0.8
2,369,108 + MPMX26_02299 0.13 -1.6
2,369,108 + MPMX26_02299 0.13 -0.4
2,369,108 + MPMX26_02299 0.13 -0.4
2,369,109 + MPMX26_02299 0.13 -0.7
2,369,177 + MPMX26_02299 0.16 -1.3
2,369,179 + MPMX26_02299 0.16 -1.6
2,369,204 + MPMX26_02299 0.17 -3.9
2,369,289 + MPMX26_02299 0.21 -0.7
2,369,375 + MPMX26_02299 0.24 -2.0
2,369,406 + MPMX26_02299 0.25 -2.2
2,369,444 + MPMX26_02299 0.27 -2.7
2,369,448 + MPMX26_02299 0.27 -1.9
2,369,449 + MPMX26_02299 0.27 -2.6
2,369,456 + MPMX26_02299 0.27 -1.3
2,369,470 + MPMX26_02299 0.28 -0.7
2,369,550 + MPMX26_02299 0.31 -1.6

Or see this region's nucleotide sequence