Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02272

Experiment: Ethanolamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02271 and MPMX26_02272 overlap by 1 nucleotidesMPMX26_02272 and MPMX26_02273 are separated by 37 nucleotides MPMX26_02270: MPMX26_02270 - putative ABC transporter ATP-binding protein YejF, at 2,337,250 to 2,338,845 _02270 MPMX26_02271: MPMX26_02271 - Inner membrane ABC transporter permease protein YejE, at 2,338,820 to 2,339,833 _02271 MPMX26_02272: MPMX26_02272 - Inner membrane ABC transporter permease protein YejB, at 2,339,833 to 2,340,900 _02272 MPMX26_02273: MPMX26_02273 - hypothetical protein, at 2,340,938 to 2,342,782 _02273 Position (kb) 2339 2340 2341Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 2339.194 kb on - strand, within MPMX26_02271at 2339.194 kb on - strand, within MPMX26_02271at 2339.263 kb on - strand, within MPMX26_02271at 2339.290 kb on - strand, within MPMX26_02271at 2339.300 kb on - strand, within MPMX26_02271at 2339.300 kb on - strand, within MPMX26_02271at 2339.348 kb on - strand, within MPMX26_02271at 2339.353 kb on - strand, within MPMX26_02271at 2339.353 kb on - strand, within MPMX26_02271at 2339.408 kb on - strand, within MPMX26_02271at 2339.408 kb on - strand, within MPMX26_02271at 2339.488 kb on - strand, within MPMX26_02271at 2340.120 kb on - strand, within MPMX26_02272at 2340.213 kb on - strand, within MPMX26_02272at 2340.399 kb on - strand, within MPMX26_02272at 2340.621 kb on - strand, within MPMX26_02272at 2340.995 kb on - strandat 2341.000 kb on - strandat 2341.072 kb on - strandat 2341.117 kb on - strandat 2341.248 kb on - strand, within MPMX26_02273at 2341.253 kb on - strand, within MPMX26_02273at 2341.259 kb on - strand, within MPMX26_02273at 2341.259 kb on - strand, within MPMX26_02273at 2341.259 kb on - strand, within MPMX26_02273at 2341.261 kb on - strand, within MPMX26_02273at 2341.261 kb on - strand, within MPMX26_02273at 2341.312 kb on - strand, within MPMX26_02273at 2341.312 kb on - strand, within MPMX26_02273at 2341.334 kb on - strand, within MPMX26_02273at 2341.351 kb on - strand, within MPMX26_02273at 2341.367 kb on - strand, within MPMX26_02273at 2341.429 kb on - strand, within MPMX26_02273at 2341.486 kb on - strand, within MPMX26_02273at 2341.486 kb on - strand, within MPMX26_02273at 2341.636 kb on - strand, within MPMX26_02273at 2341.724 kb on - strand, within MPMX26_02273at 2341.736 kb on - strand, within MPMX26_02273at 2341.736 kb on - strand, within MPMX26_02273at 2341.748 kb on - strand, within MPMX26_02273at 2341.826 kb on - strand, within MPMX26_02273at 2341.826 kb on - strand, within MPMX26_02273at 2341.879 kb on - strand, within MPMX26_02273at 2341.879 kb on - strand, within MPMX26_02273at 2341.879 kb on - strand, within MPMX26_02273at 2341.879 kb on - strand, within MPMX26_02273at 2341.879 kb on - strand, within MPMX26_02273at 2341.880 kb on - strand, within MPMX26_02273at 2341.880 kb on - strand, within MPMX26_02273at 2341.880 kb on - strand, within MPMX26_02273at 2341.880 kb on - strand, within MPMX26_02273at 2341.880 kb on - strand, within MPMX26_02273at 2341.880 kb on - strand, within MPMX26_02273at 2341.880 kb on - strand, within MPMX26_02273

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Per-strain Table

Position Strand Gene LocusTag Fraction Ethanolamine (N)
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2,339,194 - MPMX26_02271 0.37 -2.1
2,339,194 - MPMX26_02271 0.37 -3.5
2,339,263 - MPMX26_02271 0.44 -1.9
2,339,290 - MPMX26_02271 0.46 -1.2
2,339,300 - MPMX26_02271 0.47 -2.0
2,339,300 - MPMX26_02271 0.47 -3.4
2,339,348 - MPMX26_02271 0.52 -1.9
2,339,353 - MPMX26_02271 0.53 -0.7
2,339,353 - MPMX26_02271 0.53 -1.7
2,339,408 - MPMX26_02271 0.58 -3.5
2,339,408 - MPMX26_02271 0.58 -1.7
2,339,488 - MPMX26_02271 0.66 -0.4
2,340,120 - MPMX26_02272 0.27 -1.7
2,340,213 - MPMX26_02272 0.36 -1.7
2,340,399 - MPMX26_02272 0.53 -0.4
2,340,621 - MPMX26_02272 0.74 -3.3
2,340,995 - +0.8
2,341,000 - -2.6
2,341,072 - -3.9
2,341,117 - -2.6
2,341,248 - MPMX26_02273 0.17 -3.0
2,341,253 - MPMX26_02273 0.17 -2.3
2,341,259 - MPMX26_02273 0.17 -3.5
2,341,259 - MPMX26_02273 0.17 -4.4
2,341,259 - MPMX26_02273 0.17 -2.4
2,341,261 - MPMX26_02273 0.18 -2.7
2,341,261 - MPMX26_02273 0.18 -3.2
2,341,312 - MPMX26_02273 0.20 -2.5
2,341,312 - MPMX26_02273 0.20 -2.8
2,341,334 - MPMX26_02273 0.21 -5.1
2,341,351 - MPMX26_02273 0.22 -0.7
2,341,367 - MPMX26_02273 0.23 -3.3
2,341,429 - MPMX26_02273 0.27 -3.1
2,341,486 - MPMX26_02273 0.30 -2.7
2,341,486 - MPMX26_02273 0.30 -2.2
2,341,636 - MPMX26_02273 0.38 -1.2
2,341,724 - MPMX26_02273 0.43 -2.7
2,341,736 - MPMX26_02273 0.43 -1.2
2,341,736 - MPMX26_02273 0.43 -0.7
2,341,748 - MPMX26_02273 0.44 -2.2
2,341,826 - MPMX26_02273 0.48 -3.5
2,341,826 - MPMX26_02273 0.48 -2.8
2,341,879 - MPMX26_02273 0.51 -3.5
2,341,879 - MPMX26_02273 0.51 -3.8
2,341,879 - MPMX26_02273 0.51 -0.7
2,341,879 - MPMX26_02273 0.51 -3.6
2,341,879 - MPMX26_02273 0.51 -2.1
2,341,880 - MPMX26_02273 0.51 -2.3
2,341,880 - MPMX26_02273 0.51 -3.4
2,341,880 - MPMX26_02273 0.51 -3.9
2,341,880 - MPMX26_02273 0.51 -3.4
2,341,880 - MPMX26_02273 0.51 -2.9
2,341,880 - MPMX26_02273 0.51 -3.2
2,341,880 - MPMX26_02273 0.51 -4.6

Or see this region's nucleotide sequence