Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02271

Experiment: Ethanolamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02270 and MPMX26_02271 overlap by 26 nucleotidesMPMX26_02271 and MPMX26_02272 overlap by 1 nucleotides MPMX26_02270: MPMX26_02270 - putative ABC transporter ATP-binding protein YejF, at 2,337,250 to 2,338,845 _02270 MPMX26_02271: MPMX26_02271 - Inner membrane ABC transporter permease protein YejE, at 2,338,820 to 2,339,833 _02271 MPMX26_02272: MPMX26_02272 - Inner membrane ABC transporter permease protein YejB, at 2,339,833 to 2,340,900 _02272 Position (kb) 2338 2339 2340Strain fitness (log2 ratio) -3 -2 -1 0 1at 2338.041 kb on - strand, within MPMX26_02270at 2338.093 kb on - strand, within MPMX26_02270at 2338.717 kb on - strandat 2339.194 kb on - strand, within MPMX26_02271at 2339.194 kb on - strand, within MPMX26_02271at 2339.263 kb on - strand, within MPMX26_02271at 2339.290 kb on - strand, within MPMX26_02271at 2339.300 kb on - strand, within MPMX26_02271at 2339.300 kb on - strand, within MPMX26_02271at 2339.348 kb on - strand, within MPMX26_02271at 2339.353 kb on - strand, within MPMX26_02271at 2339.353 kb on - strand, within MPMX26_02271at 2339.408 kb on - strand, within MPMX26_02271at 2339.408 kb on - strand, within MPMX26_02271at 2339.488 kb on - strand, within MPMX26_02271at 2340.120 kb on - strand, within MPMX26_02272at 2340.213 kb on - strand, within MPMX26_02272at 2340.399 kb on - strand, within MPMX26_02272at 2340.621 kb on - strand, within MPMX26_02272

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Per-strain Table

Position Strand Gene LocusTag Fraction Ethanolamine (N)
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2,338,041 - MPMX26_02270 0.50 -1.6
2,338,093 - MPMX26_02270 0.53 -1.0
2,338,717 - -1.2
2,339,194 - MPMX26_02271 0.37 -2.1
2,339,194 - MPMX26_02271 0.37 -3.5
2,339,263 - MPMX26_02271 0.44 -1.9
2,339,290 - MPMX26_02271 0.46 -1.2
2,339,300 - MPMX26_02271 0.47 -2.0
2,339,300 - MPMX26_02271 0.47 -3.4
2,339,348 - MPMX26_02271 0.52 -1.9
2,339,353 - MPMX26_02271 0.53 -0.7
2,339,353 - MPMX26_02271 0.53 -1.7
2,339,408 - MPMX26_02271 0.58 -3.5
2,339,408 - MPMX26_02271 0.58 -1.7
2,339,488 - MPMX26_02271 0.66 -0.4
2,340,120 - MPMX26_02272 0.27 -1.7
2,340,213 - MPMX26_02272 0.36 -1.7
2,340,399 - MPMX26_02272 0.53 -0.4
2,340,621 - MPMX26_02272 0.74 -3.3

Or see this region's nucleotide sequence