Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02254

Experiment: Ethanolamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02252 and MPMX26_02253 are separated by 232 nucleotidesMPMX26_02253 and MPMX26_02254 are separated by 272 nucleotidesMPMX26_02254 and MPMX26_02255 are separated by 87 nucleotides MPMX26_02252: MPMX26_02252 - Glutamate dehydrogenase, at 2,318,319 to 2,319,590 _02252 MPMX26_02253: MPMX26_02253 - Regulatory protein AsnC, at 2,319,823 to 2,320,245 _02253 MPMX26_02254: MPMX26_02254 - tRNA-Ser, at 2,320,518 to 2,320,607 _02254 MPMX26_02255: MPMX26_02255 - 2,4-dienoyl-CoA reductase, at 2,320,695 to 2,322,725 _02255 Position (kb) 2320 2321Strain fitness (log2 ratio) -1 0 1 2 3at 2319.526 kb on - strandat 2319.567 kb on - strandat 2319.567 kb on - strandat 2319.567 kb on - strandat 2319.567 kb on - strandat 2319.572 kb on - strandat 2319.922 kb on + strand, within MPMX26_02253at 2319.955 kb on + strand, within MPMX26_02253at 2319.961 kb on + strand, within MPMX26_02253at 2319.968 kb on + strand, within MPMX26_02253at 2319.971 kb on + strand, within MPMX26_02253at 2320.048 kb on + strand, within MPMX26_02253at 2320.084 kb on + strand, within MPMX26_02253at 2320.198 kb on + strand, within MPMX26_02253at 2320.198 kb on + strand, within MPMX26_02253at 2320.219 kb on + strandat 2320.541 kb on - strand, within MPMX26_02254at 2320.542 kb on - strand, within MPMX26_02254at 2320.603 kb on - strandat 2320.603 kb on - strandat 2320.720 kb on - strandat 2320.761 kb on - strandat 2320.796 kb on - strandat 2320.872 kb on - strandat 2320.886 kb on - strandat 2320.953 kb on - strand, within MPMX26_02255at 2321.148 kb on - strand, within MPMX26_02255

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Per-strain Table

Position Strand Gene LocusTag Fraction Ethanolamine (N)
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2,319,526 - +3.0
2,319,567 - +0.1
2,319,567 - +2.6
2,319,567 - +2.1
2,319,567 - +1.6
2,319,572 - +2.3
2,319,922 + MPMX26_02253 0.23 +2.1
2,319,955 + MPMX26_02253 0.31 +2.1
2,319,961 + MPMX26_02253 0.33 +1.5
2,319,968 + MPMX26_02253 0.34 +1.0
2,319,971 + MPMX26_02253 0.35 +1.3
2,320,048 + MPMX26_02253 0.53 +2.7
2,320,084 + MPMX26_02253 0.62 +2.6
2,320,198 + MPMX26_02253 0.89 +2.6
2,320,198 + MPMX26_02253 0.89 +2.3
2,320,219 + +2.8
2,320,541 - MPMX26_02254 0.26 +0.9
2,320,542 - MPMX26_02254 0.27 +1.0
2,320,603 - +1.3
2,320,603 - +1.3
2,320,720 - -0.4
2,320,761 - -1.6
2,320,796 - -0.4
2,320,872 - +0.2
2,320,886 - +0.6
2,320,953 - MPMX26_02255 0.13 +0.4
2,321,148 - MPMX26_02255 0.22 -1.4

Or see this region's nucleotide sequence