Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02232

Experiment: Ethanolamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02230 and MPMX26_02231 are separated by 50 nucleotidesMPMX26_02231 and MPMX26_02232 are separated by 10 nucleotidesMPMX26_02232 and MPMX26_02233 are separated by 23 nucleotidesMPMX26_02233 and MPMX26_02234 are separated by 137 nucleotides MPMX26_02230: MPMX26_02230 - Tyrosine recombinase XerC, at 2,289,180 to 2,290,100 _02230 MPMX26_02231: MPMX26_02231 - Diaminopimelate epimerase, at 2,290,151 to 2,290,996 _02231 MPMX26_02232: MPMX26_02232 - Diaminopimelate decarboxylase, at 2,291,007 to 2,292,257 _02232 MPMX26_02233: MPMX26_02233 - hypothetical protein, at 2,292,281 to 2,292,532 _02233 MPMX26_02234: MPMX26_02234 - D-serine/D-alanine/glycine transporter, at 2,292,670 to 2,294,073 _02234 Position (kb) 2291 2292 2293Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 2290.102 kb on - strandat 2290.107 kb on - strandat 2290.107 kb on - strandat 2290.107 kb on - strandat 2290.107 kb on - strandat 2290.107 kb on - strandat 2290.117 kb on - strandat 2291.060 kb on - strandat 2291.060 kb on - strandat 2291.079 kb on - strandat 2291.079 kb on - strandat 2291.079 kb on - strandat 2291.129 kb on - strandat 2291.146 kb on - strand, within MPMX26_02232at 2291.153 kb on - strand, within MPMX26_02232at 2291.205 kb on - strand, within MPMX26_02232at 2291.279 kb on - strand, within MPMX26_02232at 2291.290 kb on - strand, within MPMX26_02232at 2291.309 kb on - strand, within MPMX26_02232at 2291.316 kb on - strand, within MPMX26_02232at 2291.316 kb on - strand, within MPMX26_02232at 2291.321 kb on - strand, within MPMX26_02232at 2291.326 kb on - strand, within MPMX26_02232at 2291.331 kb on - strand, within MPMX26_02232at 2291.388 kb on - strand, within MPMX26_02232at 2291.398 kb on - strand, within MPMX26_02232at 2291.398 kb on - strand, within MPMX26_02232at 2291.398 kb on - strand, within MPMX26_02232at 2291.406 kb on - strand, within MPMX26_02232at 2291.414 kb on - strand, within MPMX26_02232at 2291.414 kb on - strand, within MPMX26_02232at 2291.414 kb on - strand, within MPMX26_02232at 2291.429 kb on - strand, within MPMX26_02232at 2291.444 kb on - strand, within MPMX26_02232at 2291.502 kb on - strand, within MPMX26_02232at 2291.507 kb on - strand, within MPMX26_02232at 2291.507 kb on - strand, within MPMX26_02232at 2291.507 kb on - strand, within MPMX26_02232at 2291.507 kb on - strand, within MPMX26_02232at 2291.507 kb on - strand, within MPMX26_02232at 2291.507 kb on - strand, within MPMX26_02232at 2291.507 kb on - strand, within MPMX26_02232at 2291.509 kb on - strand, within MPMX26_02232at 2291.517 kb on - strand, within MPMX26_02232at 2291.571 kb on - strand, within MPMX26_02232at 2291.583 kb on - strand, within MPMX26_02232at 2291.592 kb on - strand, within MPMX26_02232at 2291.602 kb on - strand, within MPMX26_02232at 2291.623 kb on - strand, within MPMX26_02232at 2291.624 kb on - strand, within MPMX26_02232at 2291.624 kb on - strand, within MPMX26_02232at 2291.659 kb on - strand, within MPMX26_02232at 2291.659 kb on - strand, within MPMX26_02232at 2291.659 kb on - strand, within MPMX26_02232at 2291.668 kb on - strand, within MPMX26_02232at 2291.702 kb on - strand, within MPMX26_02232at 2291.741 kb on - strand, within MPMX26_02232at 2291.741 kb on - strand, within MPMX26_02232at 2291.741 kb on - strand, within MPMX26_02232at 2291.741 kb on - strand, within MPMX26_02232at 2291.741 kb on - strand, within MPMX26_02232at 2291.814 kb on - strand, within MPMX26_02232at 2291.881 kb on - strand, within MPMX26_02232at 2291.886 kb on - strand, within MPMX26_02232at 2291.921 kb on - strand, within MPMX26_02232at 2291.959 kb on - strand, within MPMX26_02232at 2292.008 kb on - strand, within MPMX26_02232at 2292.031 kb on - strand, within MPMX26_02232at 2292.048 kb on - strand, within MPMX26_02232at 2292.062 kb on - strand, within MPMX26_02232at 2292.099 kb on - strand, within MPMX26_02232at 2292.132 kb on - strand, within MPMX26_02232at 2292.134 kb on - strandat 2292.134 kb on - strandat 2292.134 kb on - strandat 2292.134 kb on - strandat 2292.134 kb on - strandat 2292.134 kb on - strandat 2292.134 kb on - strandat 2292.134 kb on - strandat 2292.134 kb on - strandat 2292.134 kb on - strandat 2292.134 kb on - strandat 2292.134 kb on - strandat 2292.134 kb on - strandat 2292.134 kb on - strandat 2292.134 kb on - strandat 2292.134 kb on - strandat 2292.134 kb on - strandat 2292.134 kb on - strandat 2292.134 kb on - strandat 2292.134 kb on - strandat 2292.134 kb on - strandat 2292.134 kb on - strandat 2292.134 kb on - strandat 2292.134 kb on - strandat 2292.134 kb on - strandat 2292.134 kb on - strandat 2292.134 kb on - strandat 2292.134 kb on - strandat 2292.144 kb on - strandat 2292.189 kb on - strandat 2292.202 kb on - strandat 2292.221 kb on - strandat 2292.221 kb on - strandat 2292.272 kb on - strandat 2292.277 kb on - strandat 2292.277 kb on - strandat 2292.277 kb on - strandat 2292.293 kb on - strandat 2292.298 kb on - strandat 2292.365 kb on - strand, within MPMX26_02233at 2292.372 kb on - strand, within MPMX26_02233at 2292.410 kb on - strand, within MPMX26_02233at 2292.449 kb on - strand, within MPMX26_02233at 2292.736 kb on - strandat 2292.737 kb on - strandat 2292.737 kb on - strandat 2292.737 kb on - strandat 2292.737 kb on - strandat 2292.737 kb on - strandat 2292.737 kb on - strandat 2292.737 kb on - strandat 2292.752 kb on - strandat 2292.756 kb on - strandat 2292.767 kb on - strandat 2292.781 kb on - strandat 2292.822 kb on - strand, within MPMX26_02234at 2292.822 kb on - strand, within MPMX26_02234at 2292.822 kb on - strand, within MPMX26_02234at 2292.822 kb on - strand, within MPMX26_02234at 2292.822 kb on - strand, within MPMX26_02234at 2292.827 kb on - strand, within MPMX26_02234at 2292.878 kb on - strand, within MPMX26_02234at 2292.878 kb on - strand, within MPMX26_02234at 2292.887 kb on - strand, within MPMX26_02234at 2292.912 kb on - strand, within MPMX26_02234at 2292.922 kb on - strand, within MPMX26_02234at 2292.922 kb on - strand, within MPMX26_02234at 2292.938 kb on + strand, within MPMX26_02234at 2292.946 kb on - strand, within MPMX26_02234at 2292.946 kb on - strand, within MPMX26_02234at 2292.946 kb on - strand, within MPMX26_02234at 2292.946 kb on - strand, within MPMX26_02234at 2292.946 kb on - strand, within MPMX26_02234at 2292.946 kb on - strand, within MPMX26_02234at 2292.946 kb on - strand, within MPMX26_02234at 2292.946 kb on - strand, within MPMX26_02234at 2292.946 kb on - strand, within MPMX26_02234at 2292.956 kb on - strand, within MPMX26_02234at 2292.963 kb on - strand, within MPMX26_02234at 2292.963 kb on - strand, within MPMX26_02234at 2292.990 kb on - strand, within MPMX26_02234at 2292.990 kb on - strand, within MPMX26_02234at 2293.000 kb on - strand, within MPMX26_02234at 2293.000 kb on - strand, within MPMX26_02234at 2293.000 kb on - strand, within MPMX26_02234at 2293.072 kb on - strand, within MPMX26_02234at 2293.093 kb on - strand, within MPMX26_02234at 2293.093 kb on - strand, within MPMX26_02234at 2293.093 kb on - strand, within MPMX26_02234at 2293.112 kb on - strand, within MPMX26_02234at 2293.123 kb on - strand, within MPMX26_02234at 2293.132 kb on + strand, within MPMX26_02234at 2293.133 kb on - strand, within MPMX26_02234at 2293.156 kb on - strand, within MPMX26_02234at 2293.156 kb on - strand, within MPMX26_02234at 2293.156 kb on - strand, within MPMX26_02234

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Per-strain Table

Position Strand Gene LocusTag Fraction Ethanolamine (N)
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2,290,102 - +0.2
2,290,107 - -3.4
2,290,107 - -1.2
2,290,107 - -0.3
2,290,107 - -0.9
2,290,107 - -1.4
2,290,117 - -1.6
2,291,060 - -2.6
2,291,060 - -2.7
2,291,079 - -2.6
2,291,079 - -4.0
2,291,079 - -3.0
2,291,129 - -3.1
2,291,146 - MPMX26_02232 0.11 -3.3
2,291,153 - MPMX26_02232 0.12 -1.9
2,291,205 - MPMX26_02232 0.16 -2.8
2,291,279 - MPMX26_02232 0.22 -4.5
2,291,290 - MPMX26_02232 0.23 -1.9
2,291,309 - MPMX26_02232 0.24 -3.6
2,291,316 - MPMX26_02232 0.25 -3.0
2,291,316 - MPMX26_02232 0.25 -1.2
2,291,321 - MPMX26_02232 0.25 -2.2
2,291,326 - MPMX26_02232 0.25 -0.8
2,291,331 - MPMX26_02232 0.26 -3.2
2,291,388 - MPMX26_02232 0.30 -3.1
2,291,398 - MPMX26_02232 0.31 -1.0
2,291,398 - MPMX26_02232 0.31 -2.2
2,291,398 - MPMX26_02232 0.31 -3.8
2,291,406 - MPMX26_02232 0.32 -3.9
2,291,414 - MPMX26_02232 0.33 -1.4
2,291,414 - MPMX26_02232 0.33 -4.2
2,291,414 - MPMX26_02232 0.33 -3.3
2,291,429 - MPMX26_02232 0.34 -3.5
2,291,444 - MPMX26_02232 0.35 -2.0
2,291,502 - MPMX26_02232 0.40 -2.6
2,291,507 - MPMX26_02232 0.40 -2.0
2,291,507 - MPMX26_02232 0.40 -2.6
2,291,507 - MPMX26_02232 0.40 -3.5
2,291,507 - MPMX26_02232 0.40 -2.4
2,291,507 - MPMX26_02232 0.40 -2.8
2,291,507 - MPMX26_02232 0.40 -2.9
2,291,507 - MPMX26_02232 0.40 -3.9
2,291,509 - MPMX26_02232 0.40 -2.2
2,291,517 - MPMX26_02232 0.41 -0.4
2,291,571 - MPMX26_02232 0.45 -3.2
2,291,583 - MPMX26_02232 0.46 -3.5
2,291,592 - MPMX26_02232 0.47 -2.7
2,291,602 - MPMX26_02232 0.48 -2.7
2,291,623 - MPMX26_02232 0.49 -1.9
2,291,624 - MPMX26_02232 0.49 -2.8
2,291,624 - MPMX26_02232 0.49 -2.2
2,291,659 - MPMX26_02232 0.52 -1.8
2,291,659 - MPMX26_02232 0.52 -0.8
2,291,659 - MPMX26_02232 0.52 -0.8
2,291,668 - MPMX26_02232 0.53 -2.5
2,291,702 - MPMX26_02232 0.56 -4.1
2,291,741 - MPMX26_02232 0.59 -3.8
2,291,741 - MPMX26_02232 0.59 -2.6
2,291,741 - MPMX26_02232 0.59 -3.8
2,291,741 - MPMX26_02232 0.59 -4.0
2,291,741 - MPMX26_02232 0.59 -3.7
2,291,814 - MPMX26_02232 0.65 -2.9
2,291,881 - MPMX26_02232 0.70 -2.6
2,291,886 - MPMX26_02232 0.70 -2.0
2,291,921 - MPMX26_02232 0.73 -3.9
2,291,959 - MPMX26_02232 0.76 -1.8
2,292,008 - MPMX26_02232 0.80 -0.8
2,292,031 - MPMX26_02232 0.82 -0.4
2,292,048 - MPMX26_02232 0.83 -2.8
2,292,062 - MPMX26_02232 0.84 -3.6
2,292,099 - MPMX26_02232 0.87 -3.1
2,292,132 - MPMX26_02232 0.90 -3.2
2,292,134 - -4.0
2,292,134 - -4.7
2,292,134 - -4.2
2,292,134 - -2.0
2,292,134 - -4.0
2,292,134 - -3.6
2,292,134 - -4.0
2,292,134 - -4.0
2,292,134 - -4.0
2,292,134 - -2.8
2,292,134 - -1.0
2,292,134 - -3.2
2,292,134 - -3.9
2,292,134 - -1.6
2,292,134 - -3.5
2,292,134 - -3.0
2,292,134 - -3.9
2,292,134 - -3.6
2,292,134 - -3.5
2,292,134 - -3.4
2,292,134 - -2.6
2,292,134 - -3.5
2,292,134 - -4.0
2,292,134 - -4.1
2,292,134 - -3.9
2,292,134 - -3.8
2,292,134 - -3.4
2,292,134 - -4.7
2,292,144 - -3.0
2,292,189 - -2.7
2,292,202 - -2.1
2,292,221 - -3.2
2,292,221 - -3.6
2,292,272 - -0.8
2,292,277 - -1.5
2,292,277 - -0.0
2,292,277 - -1.6
2,292,293 - -0.4
2,292,298 - -2.0
2,292,365 - MPMX26_02233 0.33 +0.4
2,292,372 - MPMX26_02233 0.36 +0.3
2,292,410 - MPMX26_02233 0.51 -0.4
2,292,449 - MPMX26_02233 0.67 -0.1
2,292,736 - +2.0
2,292,737 - +1.3
2,292,737 - +0.7
2,292,737 - +1.0
2,292,737 - +2.0
2,292,737 - +1.6
2,292,737 - +0.8
2,292,737 - +0.8
2,292,752 - +0.4
2,292,756 - +1.6
2,292,767 - -0.2
2,292,781 - +1.4
2,292,822 - MPMX26_02234 0.11 +1.1
2,292,822 - MPMX26_02234 0.11 +0.7
2,292,822 - MPMX26_02234 0.11 +1.0
2,292,822 - MPMX26_02234 0.11 +2.1
2,292,822 - MPMX26_02234 0.11 +1.4
2,292,827 - MPMX26_02234 0.11 +0.4
2,292,878 - MPMX26_02234 0.15 +1.8
2,292,878 - MPMX26_02234 0.15 +1.6
2,292,887 - MPMX26_02234 0.15 +0.2
2,292,912 - MPMX26_02234 0.17 +1.0
2,292,922 - MPMX26_02234 0.18 +1.7
2,292,922 - MPMX26_02234 0.18 +1.2
2,292,938 + MPMX26_02234 0.19 -0.0
2,292,946 - MPMX26_02234 0.20 +1.1
2,292,946 - MPMX26_02234 0.20 +1.3
2,292,946 - MPMX26_02234 0.20 +1.0
2,292,946 - MPMX26_02234 0.20 +1.0
2,292,946 - MPMX26_02234 0.20 +1.4
2,292,946 - MPMX26_02234 0.20 +1.4
2,292,946 - MPMX26_02234 0.20 +1.7
2,292,946 - MPMX26_02234 0.20 +1.1
2,292,946 - MPMX26_02234 0.20 +1.3
2,292,956 - MPMX26_02234 0.20 +1.5
2,292,963 - MPMX26_02234 0.21 +1.3
2,292,963 - MPMX26_02234 0.21 +1.5
2,292,990 - MPMX26_02234 0.23 +0.8
2,292,990 - MPMX26_02234 0.23 +0.8
2,293,000 - MPMX26_02234 0.24 +1.2
2,293,000 - MPMX26_02234 0.24 -0.0
2,293,000 - MPMX26_02234 0.24 +1.6
2,293,072 - MPMX26_02234 0.29 +1.3
2,293,093 - MPMX26_02234 0.30 +1.2
2,293,093 - MPMX26_02234 0.30 +1.6
2,293,093 - MPMX26_02234 0.30 +1.4
2,293,112 - MPMX26_02234 0.31 +0.2
2,293,123 - MPMX26_02234 0.32 -0.8
2,293,132 + MPMX26_02234 0.33 +3.3
2,293,133 - MPMX26_02234 0.33 +1.6
2,293,156 - MPMX26_02234 0.35 +1.4
2,293,156 - MPMX26_02234 0.35 +1.5
2,293,156 - MPMX26_02234 0.35 +1.2

Or see this region's nucleotide sequence