Experiment: Ethanolamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02230 and MPMX26_02231 are separated by 50 nucleotides MPMX26_02231 and MPMX26_02232 are separated by 10 nucleotides MPMX26_02232 and MPMX26_02233 are separated by 23 nucleotides MPMX26_02233 and MPMX26_02234 are separated by 137 nucleotides
MPMX26_02230: MPMX26_02230 - Tyrosine recombinase XerC, at 2,289,180 to 2,290,100
_02230
MPMX26_02231: MPMX26_02231 - Diaminopimelate epimerase, at 2,290,151 to 2,290,996
_02231
MPMX26_02232: MPMX26_02232 - Diaminopimelate decarboxylase, at 2,291,007 to 2,292,257
_02232
MPMX26_02233: MPMX26_02233 - hypothetical protein, at 2,292,281 to 2,292,532
_02233
MPMX26_02234: MPMX26_02234 - D-serine/D-alanine/glycine transporter, at 2,292,670 to 2,294,073
_02234
Position (kb)
2291
2292
2293 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 2290.102 kb on - strand at 2290.107 kb on - strand at 2290.107 kb on - strand at 2290.107 kb on - strand at 2290.107 kb on - strand at 2290.107 kb on - strand at 2290.117 kb on - strand at 2291.060 kb on - strand at 2291.060 kb on - strand at 2291.079 kb on - strand at 2291.079 kb on - strand at 2291.079 kb on - strand at 2291.129 kb on - strand at 2291.146 kb on - strand, within MPMX26_02232 at 2291.153 kb on - strand, within MPMX26_02232 at 2291.205 kb on - strand, within MPMX26_02232 at 2291.279 kb on - strand, within MPMX26_02232 at 2291.290 kb on - strand, within MPMX26_02232 at 2291.309 kb on - strand, within MPMX26_02232 at 2291.316 kb on - strand, within MPMX26_02232 at 2291.316 kb on - strand, within MPMX26_02232 at 2291.321 kb on - strand, within MPMX26_02232 at 2291.326 kb on - strand, within MPMX26_02232 at 2291.331 kb on - strand, within MPMX26_02232 at 2291.388 kb on - strand, within MPMX26_02232 at 2291.398 kb on - strand, within MPMX26_02232 at 2291.398 kb on - strand, within MPMX26_02232 at 2291.398 kb on - strand, within MPMX26_02232 at 2291.406 kb on - strand, within MPMX26_02232 at 2291.414 kb on - strand, within MPMX26_02232 at 2291.414 kb on - strand, within MPMX26_02232 at 2291.414 kb on - strand, within MPMX26_02232 at 2291.429 kb on - strand, within MPMX26_02232 at 2291.444 kb on - strand, within MPMX26_02232 at 2291.502 kb on - strand, within MPMX26_02232 at 2291.507 kb on - strand, within MPMX26_02232 at 2291.507 kb on - strand, within MPMX26_02232 at 2291.507 kb on - strand, within MPMX26_02232 at 2291.507 kb on - strand, within MPMX26_02232 at 2291.507 kb on - strand, within MPMX26_02232 at 2291.507 kb on - strand, within MPMX26_02232 at 2291.507 kb on - strand, within MPMX26_02232 at 2291.509 kb on - strand, within MPMX26_02232 at 2291.517 kb on - strand, within MPMX26_02232 at 2291.571 kb on - strand, within MPMX26_02232 at 2291.583 kb on - strand, within MPMX26_02232 at 2291.592 kb on - strand, within MPMX26_02232 at 2291.602 kb on - strand, within MPMX26_02232 at 2291.623 kb on - strand, within MPMX26_02232 at 2291.624 kb on - strand, within MPMX26_02232 at 2291.624 kb on - strand, within MPMX26_02232 at 2291.659 kb on - strand, within MPMX26_02232 at 2291.659 kb on - strand, within MPMX26_02232 at 2291.659 kb on - strand, within MPMX26_02232 at 2291.668 kb on - strand, within MPMX26_02232 at 2291.702 kb on - strand, within MPMX26_02232 at 2291.741 kb on - strand, within MPMX26_02232 at 2291.741 kb on - strand, within MPMX26_02232 at 2291.741 kb on - strand, within MPMX26_02232 at 2291.741 kb on - strand, within MPMX26_02232 at 2291.741 kb on - strand, within MPMX26_02232 at 2291.814 kb on - strand, within MPMX26_02232 at 2291.881 kb on - strand, within MPMX26_02232 at 2291.886 kb on - strand, within MPMX26_02232 at 2291.921 kb on - strand, within MPMX26_02232 at 2291.959 kb on - strand, within MPMX26_02232 at 2292.008 kb on - strand, within MPMX26_02232 at 2292.031 kb on - strand, within MPMX26_02232 at 2292.048 kb on - strand, within MPMX26_02232 at 2292.062 kb on - strand, within MPMX26_02232 at 2292.099 kb on - strand, within MPMX26_02232 at 2292.132 kb on - strand, within MPMX26_02232 at 2292.134 kb on - strand at 2292.134 kb on - strand at 2292.134 kb on - strand at 2292.134 kb on - strand at 2292.134 kb on - strand at 2292.134 kb on - strand at 2292.134 kb on - strand at 2292.134 kb on - strand at 2292.134 kb on - strand at 2292.134 kb on - strand at 2292.134 kb on - strand at 2292.134 kb on - strand at 2292.134 kb on - strand at 2292.134 kb on - strand at 2292.134 kb on - strand at 2292.134 kb on - strand at 2292.134 kb on - strand at 2292.134 kb on - strand at 2292.134 kb on - strand at 2292.134 kb on - strand at 2292.134 kb on - strand at 2292.134 kb on - strand at 2292.134 kb on - strand at 2292.134 kb on - strand at 2292.134 kb on - strand at 2292.134 kb on - strand at 2292.134 kb on - strand at 2292.134 kb on - strand at 2292.144 kb on - strand at 2292.189 kb on - strand at 2292.202 kb on - strand at 2292.221 kb on - strand at 2292.221 kb on - strand at 2292.272 kb on - strand at 2292.277 kb on - strand at 2292.277 kb on - strand at 2292.277 kb on - strand at 2292.293 kb on - strand at 2292.298 kb on - strand at 2292.365 kb on - strand, within MPMX26_02233 at 2292.372 kb on - strand, within MPMX26_02233 at 2292.410 kb on - strand, within MPMX26_02233 at 2292.449 kb on - strand, within MPMX26_02233 at 2292.736 kb on - strand at 2292.737 kb on - strand at 2292.737 kb on - strand at 2292.737 kb on - strand at 2292.737 kb on - strand at 2292.737 kb on - strand at 2292.737 kb on - strand at 2292.737 kb on - strand at 2292.752 kb on - strand at 2292.756 kb on - strand at 2292.767 kb on - strand at 2292.781 kb on - strand at 2292.822 kb on - strand, within MPMX26_02234 at 2292.822 kb on - strand, within MPMX26_02234 at 2292.822 kb on - strand, within MPMX26_02234 at 2292.822 kb on - strand, within MPMX26_02234 at 2292.822 kb on - strand, within MPMX26_02234 at 2292.827 kb on - strand, within MPMX26_02234 at 2292.878 kb on - strand, within MPMX26_02234 at 2292.878 kb on - strand, within MPMX26_02234 at 2292.887 kb on - strand, within MPMX26_02234 at 2292.912 kb on - strand, within MPMX26_02234 at 2292.922 kb on - strand, within MPMX26_02234 at 2292.922 kb on - strand, within MPMX26_02234 at 2292.938 kb on + strand, within MPMX26_02234 at 2292.946 kb on - strand, within MPMX26_02234 at 2292.946 kb on - strand, within MPMX26_02234 at 2292.946 kb on - strand, within MPMX26_02234 at 2292.946 kb on - strand, within MPMX26_02234 at 2292.946 kb on - strand, within MPMX26_02234 at 2292.946 kb on - strand, within MPMX26_02234 at 2292.946 kb on - strand, within MPMX26_02234 at 2292.946 kb on - strand, within MPMX26_02234 at 2292.946 kb on - strand, within MPMX26_02234 at 2292.956 kb on - strand, within MPMX26_02234 at 2292.963 kb on - strand, within MPMX26_02234 at 2292.963 kb on - strand, within MPMX26_02234 at 2292.990 kb on - strand, within MPMX26_02234 at 2292.990 kb on - strand, within MPMX26_02234 at 2293.000 kb on - strand, within MPMX26_02234 at 2293.000 kb on - strand, within MPMX26_02234 at 2293.000 kb on - strand, within MPMX26_02234 at 2293.072 kb on - strand, within MPMX26_02234 at 2293.093 kb on - strand, within MPMX26_02234 at 2293.093 kb on - strand, within MPMX26_02234 at 2293.093 kb on - strand, within MPMX26_02234 at 2293.112 kb on - strand, within MPMX26_02234 at 2293.123 kb on - strand, within MPMX26_02234 at 2293.132 kb on + strand, within MPMX26_02234 at 2293.133 kb on - strand, within MPMX26_02234 at 2293.156 kb on - strand, within MPMX26_02234 at 2293.156 kb on - strand, within MPMX26_02234 at 2293.156 kb on - strand, within MPMX26_02234
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanolamine (N) remove 2,290,102 - +0.2 2,290,107 - -3.4 2,290,107 - -1.2 2,290,107 - -0.3 2,290,107 - -0.9 2,290,107 - -1.4 2,290,117 - -1.6 2,291,060 - -2.6 2,291,060 - -2.7 2,291,079 - -2.6 2,291,079 - -4.0 2,291,079 - -3.0 2,291,129 - -3.1 2,291,146 - MPMX26_02232 0.11 -3.3 2,291,153 - MPMX26_02232 0.12 -1.9 2,291,205 - MPMX26_02232 0.16 -2.8 2,291,279 - MPMX26_02232 0.22 -4.5 2,291,290 - MPMX26_02232 0.23 -1.9 2,291,309 - MPMX26_02232 0.24 -3.6 2,291,316 - MPMX26_02232 0.25 -3.0 2,291,316 - MPMX26_02232 0.25 -1.2 2,291,321 - MPMX26_02232 0.25 -2.2 2,291,326 - MPMX26_02232 0.25 -0.8 2,291,331 - MPMX26_02232 0.26 -3.2 2,291,388 - MPMX26_02232 0.30 -3.1 2,291,398 - MPMX26_02232 0.31 -1.0 2,291,398 - MPMX26_02232 0.31 -2.2 2,291,398 - MPMX26_02232 0.31 -3.8 2,291,406 - MPMX26_02232 0.32 -3.9 2,291,414 - MPMX26_02232 0.33 -1.4 2,291,414 - MPMX26_02232 0.33 -4.2 2,291,414 - MPMX26_02232 0.33 -3.3 2,291,429 - MPMX26_02232 0.34 -3.5 2,291,444 - MPMX26_02232 0.35 -2.0 2,291,502 - MPMX26_02232 0.40 -2.6 2,291,507 - MPMX26_02232 0.40 -2.0 2,291,507 - MPMX26_02232 0.40 -2.6 2,291,507 - MPMX26_02232 0.40 -3.5 2,291,507 - MPMX26_02232 0.40 -2.4 2,291,507 - MPMX26_02232 0.40 -2.8 2,291,507 - MPMX26_02232 0.40 -2.9 2,291,507 - MPMX26_02232 0.40 -3.9 2,291,509 - MPMX26_02232 0.40 -2.2 2,291,517 - MPMX26_02232 0.41 -0.4 2,291,571 - MPMX26_02232 0.45 -3.2 2,291,583 - MPMX26_02232 0.46 -3.5 2,291,592 - MPMX26_02232 0.47 -2.7 2,291,602 - MPMX26_02232 0.48 -2.7 2,291,623 - MPMX26_02232 0.49 -1.9 2,291,624 - MPMX26_02232 0.49 -2.8 2,291,624 - MPMX26_02232 0.49 -2.2 2,291,659 - MPMX26_02232 0.52 -1.8 2,291,659 - MPMX26_02232 0.52 -0.8 2,291,659 - MPMX26_02232 0.52 -0.8 2,291,668 - MPMX26_02232 0.53 -2.5 2,291,702 - MPMX26_02232 0.56 -4.1 2,291,741 - MPMX26_02232 0.59 -3.8 2,291,741 - MPMX26_02232 0.59 -2.6 2,291,741 - MPMX26_02232 0.59 -3.8 2,291,741 - MPMX26_02232 0.59 -4.0 2,291,741 - MPMX26_02232 0.59 -3.7 2,291,814 - MPMX26_02232 0.65 -2.9 2,291,881 - MPMX26_02232 0.70 -2.6 2,291,886 - MPMX26_02232 0.70 -2.0 2,291,921 - MPMX26_02232 0.73 -3.9 2,291,959 - MPMX26_02232 0.76 -1.8 2,292,008 - MPMX26_02232 0.80 -0.8 2,292,031 - MPMX26_02232 0.82 -0.4 2,292,048 - MPMX26_02232 0.83 -2.8 2,292,062 - MPMX26_02232 0.84 -3.6 2,292,099 - MPMX26_02232 0.87 -3.1 2,292,132 - MPMX26_02232 0.90 -3.2 2,292,134 - -4.0 2,292,134 - -4.7 2,292,134 - -4.2 2,292,134 - -2.0 2,292,134 - -4.0 2,292,134 - -3.6 2,292,134 - -4.0 2,292,134 - -4.0 2,292,134 - -4.0 2,292,134 - -2.8 2,292,134 - -1.0 2,292,134 - -3.2 2,292,134 - -3.9 2,292,134 - -1.6 2,292,134 - -3.5 2,292,134 - -3.0 2,292,134 - -3.9 2,292,134 - -3.6 2,292,134 - -3.5 2,292,134 - -3.4 2,292,134 - -2.6 2,292,134 - -3.5 2,292,134 - -4.0 2,292,134 - -4.1 2,292,134 - -3.9 2,292,134 - -3.8 2,292,134 - -3.4 2,292,134 - -4.7 2,292,144 - -3.0 2,292,189 - -2.7 2,292,202 - -2.1 2,292,221 - -3.2 2,292,221 - -3.6 2,292,272 - -0.8 2,292,277 - -1.5 2,292,277 - -0.0 2,292,277 - -1.6 2,292,293 - -0.4 2,292,298 - -2.0 2,292,365 - MPMX26_02233 0.33 +0.4 2,292,372 - MPMX26_02233 0.36 +0.3 2,292,410 - MPMX26_02233 0.51 -0.4 2,292,449 - MPMX26_02233 0.67 -0.1 2,292,736 - +2.0 2,292,737 - +1.3 2,292,737 - +0.7 2,292,737 - +1.0 2,292,737 - +2.0 2,292,737 - +1.6 2,292,737 - +0.8 2,292,737 - +0.8 2,292,752 - +0.4 2,292,756 - +1.6 2,292,767 - -0.2 2,292,781 - +1.4 2,292,822 - MPMX26_02234 0.11 +1.1 2,292,822 - MPMX26_02234 0.11 +0.7 2,292,822 - MPMX26_02234 0.11 +1.0 2,292,822 - MPMX26_02234 0.11 +2.1 2,292,822 - MPMX26_02234 0.11 +1.4 2,292,827 - MPMX26_02234 0.11 +0.4 2,292,878 - MPMX26_02234 0.15 +1.8 2,292,878 - MPMX26_02234 0.15 +1.6 2,292,887 - MPMX26_02234 0.15 +0.2 2,292,912 - MPMX26_02234 0.17 +1.0 2,292,922 - MPMX26_02234 0.18 +1.7 2,292,922 - MPMX26_02234 0.18 +1.2 2,292,938 + MPMX26_02234 0.19 -0.0 2,292,946 - MPMX26_02234 0.20 +1.1 2,292,946 - MPMX26_02234 0.20 +1.3 2,292,946 - MPMX26_02234 0.20 +1.0 2,292,946 - MPMX26_02234 0.20 +1.0 2,292,946 - MPMX26_02234 0.20 +1.4 2,292,946 - MPMX26_02234 0.20 +1.4 2,292,946 - MPMX26_02234 0.20 +1.7 2,292,946 - MPMX26_02234 0.20 +1.1 2,292,946 - MPMX26_02234 0.20 +1.3 2,292,956 - MPMX26_02234 0.20 +1.5 2,292,963 - MPMX26_02234 0.21 +1.3 2,292,963 - MPMX26_02234 0.21 +1.5 2,292,990 - MPMX26_02234 0.23 +0.8 2,292,990 - MPMX26_02234 0.23 +0.8 2,293,000 - MPMX26_02234 0.24 +1.2 2,293,000 - MPMX26_02234 0.24 -0.0 2,293,000 - MPMX26_02234 0.24 +1.6 2,293,072 - MPMX26_02234 0.29 +1.3 2,293,093 - MPMX26_02234 0.30 +1.2 2,293,093 - MPMX26_02234 0.30 +1.6 2,293,093 - MPMX26_02234 0.30 +1.4 2,293,112 - MPMX26_02234 0.31 +0.2 2,293,123 - MPMX26_02234 0.32 -0.8 2,293,132 + MPMX26_02234 0.33 +3.3 2,293,133 - MPMX26_02234 0.33 +1.6 2,293,156 - MPMX26_02234 0.35 +1.4 2,293,156 - MPMX26_02234 0.35 +1.5 2,293,156 - MPMX26_02234 0.35 +1.2
Or see this region's nucleotide sequence