Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02125

Experiment: Ethanolamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02123 and MPMX26_02124 are separated by 54 nucleotidesMPMX26_02124 and MPMX26_02125 are separated by 0 nucleotidesMPMX26_02125 and MPMX26_02126 are separated by 313 nucleotides MPMX26_02123: MPMX26_02123 - hypothetical protein, at 2,178,418 to 2,178,948 _02123 MPMX26_02124: MPMX26_02124 - hypothetical protein, at 2,179,003 to 2,179,809 _02124 MPMX26_02125: MPMX26_02125 - hypothetical protein, at 2,179,810 to 2,181,069 _02125 MPMX26_02126: MPMX26_02126 - Nitronate monooxygenase, at 2,181,383 to 2,182,444 _02126 Position (kb) 2179 2180 2181 2182Strain fitness (log2 ratio) -2 -1 0 1 2 3at 2178.836 kb on - strand, within MPMX26_02123at 2178.836 kb on - strand, within MPMX26_02123at 2178.844 kb on - strand, within MPMX26_02123at 2178.969 kb on - strandat 2179.695 kb on - strand, within MPMX26_02124at 2180.148 kb on + strand, within MPMX26_02125at 2181.507 kb on - strand, within MPMX26_02126at 2181.548 kb on + strand, within MPMX26_02126

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Per-strain Table

Position Strand Gene LocusTag Fraction Ethanolamine (N)
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2,178,836 - MPMX26_02123 0.79 +0.2
2,178,836 - MPMX26_02123 0.79 +0.9
2,178,844 - MPMX26_02123 0.80 +0.5
2,178,969 - -0.3
2,179,695 - MPMX26_02124 0.86 +3.6
2,180,148 + MPMX26_02125 0.27 -1.9
2,181,507 - MPMX26_02126 0.12 +1.2
2,181,548 + MPMX26_02126 0.16 +0.5

Or see this region's nucleotide sequence