Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02046

Experiment: Ethanolamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02045 and MPMX26_02046 are separated by 205 nucleotidesMPMX26_02046 and MPMX26_02047 are separated by 419 nucleotides MPMX26_02045: MPMX26_02045 - hypothetical protein, at 2,112,219 to 2,113,001 _02045 MPMX26_02046: MPMX26_02046 - Regulator of nucleoside diphosphate kinase, at 2,113,207 to 2,113,611 _02046 MPMX26_02047: MPMX26_02047 - hypothetical protein, at 2,114,031 to 2,114,390 _02047 Position (kb) 2113 2114Strain fitness (log2 ratio) -1 0 1at 2113.230 kb on - strandat 2113.230 kb on - strandat 2113.240 kb on - strandat 2113.240 kb on - strandat 2113.240 kb on - strandat 2113.240 kb on - strandat 2113.240 kb on - strandat 2113.240 kb on - strandat 2113.240 kb on - strandat 2113.240 kb on - strandat 2113.240 kb on - strandat 2113.240 kb on - strandat 2113.240 kb on - strandat 2113.240 kb on - strandat 2113.240 kb on - strandat 2113.240 kb on - strandat 2113.240 kb on - strandat 2113.240 kb on - strandat 2113.245 kb on - strandat 2113.245 kb on - strandat 2113.270 kb on - strand, within MPMX26_02046at 2113.270 kb on - strand, within MPMX26_02046at 2113.282 kb on - strand, within MPMX26_02046at 2113.305 kb on - strand, within MPMX26_02046at 2113.338 kb on - strand, within MPMX26_02046at 2113.338 kb on - strand, within MPMX26_02046at 2113.354 kb on - strand, within MPMX26_02046at 2113.390 kb on - strand, within MPMX26_02046at 2113.420 kb on - strand, within MPMX26_02046at 2113.420 kb on - strand, within MPMX26_02046at 2113.432 kb on - strand, within MPMX26_02046at 2113.432 kb on - strand, within MPMX26_02046at 2113.432 kb on - strand, within MPMX26_02046at 2113.461 kb on - strand, within MPMX26_02046at 2113.488 kb on - strand, within MPMX26_02046at 2113.495 kb on - strand, within MPMX26_02046at 2113.495 kb on - strand, within MPMX26_02046at 2113.495 kb on - strand, within MPMX26_02046at 2113.495 kb on - strand, within MPMX26_02046at 2113.495 kb on - strand, within MPMX26_02046at 2113.495 kb on - strand, within MPMX26_02046at 2113.495 kb on - strand, within MPMX26_02046at 2113.495 kb on - strand, within MPMX26_02046at 2113.495 kb on - strand, within MPMX26_02046at 2113.495 kb on - strand, within MPMX26_02046at 2113.501 kb on - strand, within MPMX26_02046at 2113.578 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Ethanolamine (N)
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2,113,230 - +1.3
2,113,230 - +0.4
2,113,240 - +0.3
2,113,240 - +0.5
2,113,240 - +0.6
2,113,240 - +0.5
2,113,240 - +0.7
2,113,240 - +0.4
2,113,240 - +0.6
2,113,240 - +0.7
2,113,240 - +0.1
2,113,240 - +0.9
2,113,240 - +0.5
2,113,240 - +0.2
2,113,240 - -0.1
2,113,240 - +0.4
2,113,240 - +0.4
2,113,240 - -0.0
2,113,245 - +0.5
2,113,245 - +0.3
2,113,270 - MPMX26_02046 0.16 +0.3
2,113,270 - MPMX26_02046 0.16 +0.0
2,113,282 - MPMX26_02046 0.19 +0.1
2,113,305 - MPMX26_02046 0.24 +0.9
2,113,338 - MPMX26_02046 0.32 +0.3
2,113,338 - MPMX26_02046 0.32 -0.0
2,113,354 - MPMX26_02046 0.36 +0.6
2,113,390 - MPMX26_02046 0.45 +0.6
2,113,420 - MPMX26_02046 0.53 +0.2
2,113,420 - MPMX26_02046 0.53 +0.3
2,113,432 - MPMX26_02046 0.56 +0.4
2,113,432 - MPMX26_02046 0.56 +0.0
2,113,432 - MPMX26_02046 0.56 +0.4
2,113,461 - MPMX26_02046 0.63 +0.7
2,113,488 - MPMX26_02046 0.69 +0.6
2,113,495 - MPMX26_02046 0.71 +0.1
2,113,495 - MPMX26_02046 0.71 +0.9
2,113,495 - MPMX26_02046 0.71 +0.5
2,113,495 - MPMX26_02046 0.71 +0.5
2,113,495 - MPMX26_02046 0.71 +1.6
2,113,495 - MPMX26_02046 0.71 +0.0
2,113,495 - MPMX26_02046 0.71 +0.6
2,113,495 - MPMX26_02046 0.71 +0.8
2,113,495 - MPMX26_02046 0.71 -0.7
2,113,495 - MPMX26_02046 0.71 +1.4
2,113,501 - MPMX26_02046 0.73 +0.8
2,113,578 - +0.7

Or see this region's nucleotide sequence