Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02009

Experiment: Ethanolamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02008 and MPMX26_02009 are separated by 340 nucleotidesMPMX26_02009 and MPMX26_02010 are separated by 183 nucleotidesMPMX26_02010 and MPMX26_02011 are separated by 34 nucleotides MPMX26_02008: MPMX26_02008 - hypothetical protein, at 2,071,064 to 2,074,921 _02008 MPMX26_02009: MPMX26_02009 - Alkyl hydroperoxide reductase C, at 2,075,262 to 2,075,825 _02009 MPMX26_02010: MPMX26_02010 - hypothetical protein, at 2,076,009 to 2,076,215 _02010 MPMX26_02011: MPMX26_02011 - tRNA 5-hydroxyuridine methyltransferase, at 2,076,250 to 2,076,834 _02011 Position (kb) 2075 2076Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2at 2074.281 kb on - strand, within MPMX26_02008at 2074.281 kb on - strand, within MPMX26_02008at 2074.348 kb on - strand, within MPMX26_02008at 2074.432 kb on - strand, within MPMX26_02008at 2074.432 kb on - strand, within MPMX26_02008at 2074.432 kb on - strand, within MPMX26_02008at 2074.432 kb on - strand, within MPMX26_02008at 2074.473 kb on - strand, within MPMX26_02008at 2074.475 kb on - strand, within MPMX26_02008at 2074.475 kb on - strand, within MPMX26_02008at 2074.475 kb on - strand, within MPMX26_02008at 2074.543 kb on - strandat 2074.563 kb on - strandat 2074.563 kb on - strandat 2074.563 kb on - strandat 2074.563 kb on - strandat 2074.563 kb on - strandat 2074.586 kb on - strandat 2074.596 kb on - strandat 2074.596 kb on - strandat 2074.597 kb on - strandat 2074.635 kb on - strandat 2074.637 kb on - strandat 2074.648 kb on - strandat 2074.723 kb on - strandat 2074.782 kb on - strandat 2074.793 kb on - strandat 2074.921 kb on - strandat 2074.921 kb on - strandat 2074.921 kb on - strandat 2074.921 kb on - strandat 2074.921 kb on - strandat 2074.921 kb on - strandat 2074.921 kb on - strandat 2075.241 kb on + strandat 2075.241 kb on + strandat 2075.241 kb on + strandat 2075.291 kb on + strandat 2075.338 kb on + strand, within MPMX26_02009at 2075.352 kb on + strand, within MPMX26_02009at 2075.359 kb on + strand, within MPMX26_02009at 2075.364 kb on + strand, within MPMX26_02009at 2075.364 kb on + strand, within MPMX26_02009at 2075.364 kb on + strand, within MPMX26_02009at 2075.377 kb on + strand, within MPMX26_02009at 2075.429 kb on + strand, within MPMX26_02009at 2075.429 kb on + strand, within MPMX26_02009at 2075.431 kb on + strand, within MPMX26_02009at 2075.448 kb on + strand, within MPMX26_02009at 2075.448 kb on + strand, within MPMX26_02009at 2075.450 kb on + strand, within MPMX26_02009at 2075.515 kb on + strand, within MPMX26_02009at 2075.589 kb on + strand, within MPMX26_02009at 2075.589 kb on + strand, within MPMX26_02009at 2075.610 kb on + strand, within MPMX26_02009at 2075.647 kb on + strand, within MPMX26_02009at 2075.647 kb on + strand, within MPMX26_02009at 2075.661 kb on + strand, within MPMX26_02009at 2075.661 kb on + strand, within MPMX26_02009at 2075.686 kb on + strand, within MPMX26_02009at 2075.695 kb on + strand, within MPMX26_02009at 2075.695 kb on + strand, within MPMX26_02009at 2075.695 kb on + strand, within MPMX26_02009at 2075.695 kb on + strand, within MPMX26_02009at 2075.695 kb on + strand, within MPMX26_02009at 2075.695 kb on + strand, within MPMX26_02009at 2075.714 kb on + strand, within MPMX26_02009at 2075.738 kb on + strand, within MPMX26_02009at 2075.748 kb on + strand, within MPMX26_02009at 2075.748 kb on + strand, within MPMX26_02009at 2075.748 kb on + strand, within MPMX26_02009at 2075.748 kb on + strand, within MPMX26_02009at 2075.748 kb on + strand, within MPMX26_02009at 2075.788 kb on + strandat 2075.835 kb on + strandat 2076.271 kb on - strandat 2076.471 kb on + strand, within MPMX26_02011

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Per-strain Table

Position Strand Gene LocusTag Fraction Ethanolamine (N)
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2,074,281 - MPMX26_02008 0.83 -0.0
2,074,281 - MPMX26_02008 0.83 -0.2
2,074,348 - MPMX26_02008 0.85 -0.9
2,074,432 - MPMX26_02008 0.87 -1.0
2,074,432 - MPMX26_02008 0.87 +0.3
2,074,432 - MPMX26_02008 0.87 +0.4
2,074,432 - MPMX26_02008 0.87 -2.7
2,074,473 - MPMX26_02008 0.88 -2.1
2,074,475 - MPMX26_02008 0.88 -0.4
2,074,475 - MPMX26_02008 0.88 +1.3
2,074,475 - MPMX26_02008 0.88 -0.4
2,074,543 - -0.7
2,074,563 - +1.6
2,074,563 - -0.5
2,074,563 - -3.2
2,074,563 - +0.0
2,074,563 - -1.0
2,074,586 - -0.0
2,074,596 - -1.1
2,074,596 - -0.7
2,074,597 - +0.3
2,074,635 - -1.5
2,074,637 - +0.5
2,074,648 - -0.1
2,074,723 - -0.1
2,074,782 - -2.6
2,074,793 - -0.3
2,074,921 - -0.3
2,074,921 - -1.1
2,074,921 - -0.4
2,074,921 - +0.0
2,074,921 - -0.3
2,074,921 - +0.3
2,074,921 - +1.0
2,075,241 + +1.9
2,075,241 + +2.3
2,075,241 + +1.6
2,075,291 + +2.3
2,075,338 + MPMX26_02009 0.13 +2.1
2,075,352 + MPMX26_02009 0.16 +2.3
2,075,359 + MPMX26_02009 0.17 +2.4
2,075,364 + MPMX26_02009 0.18 +2.3
2,075,364 + MPMX26_02009 0.18 +2.5
2,075,364 + MPMX26_02009 0.18 +2.2
2,075,377 + MPMX26_02009 0.20 +2.4
2,075,429 + MPMX26_02009 0.30 +2.1
2,075,429 + MPMX26_02009 0.30 +2.5
2,075,431 + MPMX26_02009 0.30 +2.3
2,075,448 + MPMX26_02009 0.33 +1.5
2,075,448 + MPMX26_02009 0.33 +1.9
2,075,450 + MPMX26_02009 0.33 +2.0
2,075,515 + MPMX26_02009 0.45 +2.1
2,075,589 + MPMX26_02009 0.58 +2.2
2,075,589 + MPMX26_02009 0.58 +0.9
2,075,610 + MPMX26_02009 0.62 +1.5
2,075,647 + MPMX26_02009 0.68 +2.3
2,075,647 + MPMX26_02009 0.68 +2.3
2,075,661 + MPMX26_02009 0.71 +2.0
2,075,661 + MPMX26_02009 0.71 +2.7
2,075,686 + MPMX26_02009 0.75 +2.2
2,075,695 + MPMX26_02009 0.77 +2.4
2,075,695 + MPMX26_02009 0.77 +2.1
2,075,695 + MPMX26_02009 0.77 +2.2
2,075,695 + MPMX26_02009 0.77 +1.9
2,075,695 + MPMX26_02009 0.77 +2.0
2,075,695 + MPMX26_02009 0.77 -5.0
2,075,714 + MPMX26_02009 0.80 +2.1
2,075,738 + MPMX26_02009 0.84 +1.0
2,075,748 + MPMX26_02009 0.86 +1.7
2,075,748 + MPMX26_02009 0.86 +2.1
2,075,748 + MPMX26_02009 0.86 +1.9
2,075,748 + MPMX26_02009 0.86 +1.7
2,075,748 + MPMX26_02009 0.86 +1.7
2,075,788 + +2.1
2,075,835 + +0.7
2,076,271 - +0.5
2,076,471 + MPMX26_02011 0.38 +1.6

Or see this region's nucleotide sequence